small nuclear ribonucleoprotein 200kDa (U5) (SNRNP200) - coding DNA reference sequence

(used for variant description)

(last modified February 28, 2015)


This file was created to facilitate the description of sequence variants on transcript NM_014014.4 in the SNRNP200 gene based on a coding DNA reference sequence following the HGVS recommendations.

The sequence was taken from NG_016973.1, covering SNRNP200 transcript NM_014014.4.


Please note that introns are available by clicking on the exon numbers above the sequence.
 (upstream sequence)
                                                   .                g.5002
                                                 gaacccgtttct       c.-121

 .         .         .         .         .         .                g.5062
 tttccttccccagtgcgtctttcctgcgtcgttccggcgcggcgggagcagagatctgcg       c.-61

 .         .         .         .         .         .                g.5122
 gccgtttgcagcttgcggtagggaggcgtggtggtctgaagcctccgagcagccgcggcc       c.-1

          .         .         .         .      | 02  .         .    g.5706
 ATGGCGGATGTAACCGCCCGTAGTCTGCAATACGAGTACAAGGCG | AACTCGAATCTTGTG    c.60
 M  A  D  V  T  A  R  S  L  Q  Y  E  Y  K  A   | N  S  N  L  V      p.20

          .         .         .         .         .         .       g.5766
 CTCCAAGCTGACCGTTCTCTCATTGACCGGACCCGCCGGGATGAACCCACAGGAGAGGTG       c.120
 L  Q  A  D  R  S  L  I  D  R  T  R  R  D  E  P  T  G  E  V         p.40

          .         .         .         .         .         .       g.5826
 CTGTCCCTTGTTGGGAAGCTGGAGGGCACCCGTATGGGAGACAAGGCTCAACGGACCAAA       c.180
 L  S  L  V  G  K  L  E  G  T  R  M  G  D  K  A  Q  R  T  K         p.60

          .         .          | 03        .         .         .    g.7260
 CCGCAGATGCAGGAGGAAAGAAGAGCCAA | GCGAAGAAAGCGTGATGAGGACCGGCATGAC    c.240
 P  Q  M  Q  E  E  R  R  A  K  |  R  R  K  R  D  E  D  R  H  D      p.80

          .         .         .         .         .         .       g.7320
 ATCAACAAGATGAAGGGTTATACTCTGCTGTCGGAGGGCATTGATGAGATGGTGGGCATC       c.300
 I  N  K  M  K  G  Y  T  L  L  S  E  G  I  D  E  M  V  G  I         p.100

          .         .         .         .         .         .       g.7380
 ATCTACAAGCCCAAAACTAAAGAGACTCGGGAGACCTATGAGGTGCTACTCAGCTTCATC       c.360
 I  Y  K  P  K  T  K  E  T  R  E  T  Y  E  V  L  L  S  F  I         p.120

          .         .  | 04      .         .         .         .    g.8882
 CAGGCTGCTCTTGGGGACCAG | CCACGTGATATCCTTTGTGGGGCAGCTGATGAAGTTCTA    c.420
 Q  A  A  L  G  D  Q   | P  R  D  I  L  C  G  A  A  D  E  V  L      p.140

          .         .         .         .         .         .       g.8942
 GCTGTTCTAAAGAATGAAAAGCTGCGGGACAAGGAAAGGCGAAAGGAGATTGACCTGCTG       c.480
 A  V  L  K  N  E  K  L  R  D  K  E  R  R  K  E  I  D  L  L         p.160

          .         .         .         .         .         .       g.9002
 CTGGGTCAAACAGATGATACCAGATACCATGTGCTAGTGAACCTGGGCAAAAAGATCACA       c.540
 L  G  Q  T  D  D  T  R  Y  H  V  L  V  N  L  G  K  K  I  T         p.180

          .         .         .     | 05   .         .         .    g.9532
 GACTATGGTGGAGATAAGGAAATCCAAAATATGG | ATGACAACATTGATGAGACATACGGT    c.600
 D  Y  G  G  D  K  E  I  Q  N  M  D |   D  N  I  D  E  T  Y  G      p.200

          .         .         . | 06       .         .         .    g.11162
 GTGAATGTGCAGTTTGAGTCTGATGAGGAG | GAAGGTGATGAAGACGTATACGGGGAGGTT    c.660
 V  N  V  Q  F  E  S  D  E  E   | E  G  D  E  D  V  Y  G  E  V      p.220

          .         .         .         .         .         .       g.11222
 CGAGAAGAGGCATCTGATGATGACATGGAAGGGGACGAGGCTGTCGTGCGCTGCACCCTC       c.720
 R  E  E  A  S  D  D  D  M  E  G  D  E  A  V  V  R  C  T  L         p.240

           | 07        .         .         .         .         .    g.11643
 TCGGCTAAT | CTCGTAGCCTCAGGTGAACTGATGAGTTCCAAGAAGAAGGATTTGCACCCT    c.780
 S  A  N   | L  V  A  S  G  E  L  M  S  S  K  K  K  D  L  H  P      p.260

          .         .         .         .         .         .       g.11703
 CGGGATATTGATGCATTTTGGCTGCAGCGGCAGCTCAGTCGTTTCTATGATGATGCCATC       c.840
 R  D  I  D  A  F  W  L  Q  R  Q  L  S  R  F  Y  D  D  A  I         p.280

          .         .         .         .   | 08     .         .    g.11875
 GTGTCGCAGAAGAAGGCAGATGAAGTATTGGAGATTTTGAAG | ACGGCCAGTGATGATCGG    c.900
 V  S  Q  K  K  A  D  E  V  L  E  I  L  K   | T  A  S  D  D  R      p.300

          .         .         .         .         .         .       g.11935
 GAATGTGAAAATCAGCTGGTTCTGCTGCTTGGTTTCAACACCTTTGATTTCATTAAAGTG       c.960
 E  C  E  N  Q  L  V  L  L  L  G  F  N  T  F  D  F  I  K  V         p.320

          .         .   | 09     .         .         .         .    g.12177
 TTGCGGCAGCACAGGATGATGA | TTTTATACTGTACCTTGCTGGCCAGTGCACAAAGTGAA    c.1020
 L  R  Q  H  R  M  M  I |   L  Y  C  T  L  L  A  S  A  Q  S  E      p.340

          .         .         .         .         .         .       g.12237
 GCTGAAAAGGAAAGGATTATGGGAAAGATGGAAGCTGACCCAGAGCTATCCAAGTTCCTC       c.1080
 A  E  K  E  R  I  M  G  K  M  E  A  D  P  E  L  S  K  F  L         p.360

          .         .         .          | 10        .         .    g.12860
 TACCAGCTTCATGAAACCGAGAAGGAGGATCTGATCCGA | GAGGAAAGGTCCCGGAGAGAG    c.1140
 Y  Q  L  H  E  T  E  K  E  D  L  I  R   | E  E  R  S  R  R  E      p.380

          .         .         .         .         .         .       g.12920
 CGAGTGCGTCAGTCTCGAATGGACACAGATCTGGAAACCATGGATCTCGACCAGGGTGGA       c.1200
 R  V  R  Q  S  R  M  D  T  D  L  E  T  M  D  L  D  Q  G  G         p.400

     | 11    .         .         .         .         .         .    g.13080
 GAG | GCACTGGCTCCACGGCAGGTTCTGGACTTGGAGGACCTGGTTTTTACCCAAGGGAGC    c.1260
 E   | A  L  A  P  R  Q  V  L  D  L  E  D  L  V  F  T  Q  G  S      p.420

          .         .         .         .         .         .       g.13140
 CACTTTATGGCCAATAAACGCTGTCAGCTTCCTGATGGATCCTTCCGTCGCCAGCGTAAG       c.1320
 H  F  M  A  N  K  R  C  Q  L  P  D  G  S  F  R  R  Q  R  K         p.440

          .         .         .         .         .        | 12.    g.13492
 GGCTATGAAGAGGTGCATGTGCCTGCTCTGAAGCCCAAGCCCTTTGGCTCAGAAGAA | CAA    c.1380
 G  Y  E  E  V  H  V  P  A  L  K  P  K  P  F  G  S  E  E   | Q      p.460

          .         .         .         .         .         .       g.13552
 CTGCTTCCAGTGGAAAAGCTGCCAAAGTATGCCCAGGCTGGGTTTGAGGGCTTCAAAACA       c.1440
 L  L  P  V  E  K  L  P  K  Y  A  Q  A  G  F  E  G  F  K  T         p.480

          .         .         .         .         .         .       g.13612
 CTGAATCGGATCCAGAGTAAGCTCTACCGTGCTGCCCTTGAGACGGATGAGAATCTGCTG       c.1500
 L  N  R  I  Q  S  K  L  Y  R  A  A  L  E  T  D  E  N  L  L         p.500

          .      | 13  .         .         .         .         .    g.13913
 CTGTGTGCTCCTACT | GGTGCTGGGAAGACCAACGTGGCCCTGATGTGCATGCTCCGAGAG    c.1560
 L  C  A  P  T   | G  A  G  K  T  N  V  A  L  M  C  M  L  R  E      p.520

          .         .         .         .         .         .       g.13973
 ATTGGGAAACACATAAACATGGACGGCACCATCAATGTGGATGACTTCAAGATTATCTAC       c.1620
 I  G  K  H  I  N  M  D  G  T  I  N  V  D  D  F  K  I  I  Y         p.540

          .         .         .         .         .  | 14      .    g.14910
 ATTGCCCCCATGCGCTCCTTGGTGCAGGAGATGGTGGGCAGCTTTGGAAAG | CGCCTGGCC    c.1680
 I  A  P  M  R  S  L  V  Q  E  M  V  G  S  F  G  K   | R  L  A      p.560

          .         .         .         .         .         .       g.14970
 ACTTATGGCATCACTGTTGCTGAACTGACTGGGGACCACCAGCTGTGCAAAGAAGAGATC       c.1740
 T  Y  G  I  T  V  A  E  L  T  G  D  H  Q  L  C  K  E  E  I         p.580

          .         .         .         .         .         .       g.15030
 AGTGCCACTCAGATCATCGTCTGCACCCCCGAGAAGTGGGACATCATCACCCGCAAGGGT       c.1800
 S  A  T  Q  I  I  V  C  T  P  E  K  W  D  I  I  T  R  K  G         p.600

          .         .         .         .   | 15     .         .    g.17068
 GGTGAGCGCACCTACACCCAGCTGGTGCGGCTCATCATTCTG | GATGAGATTCATCTTCTC    c.1860
 G  E  R  T  Y  T  Q  L  V  R  L  I  I  L   | D  E  I  H  L  L      p.620

          .         .         .         .         .         .       g.17128
 CACGATGACAGAGGTCCTGTCTTAGAAGCTTTAGTGGCCAGGGCCATCCGAAACATTGAG       c.1920
 H  D  D  R  G  P  V  L  E  A  L  V  A  R  A  I  R  N  I  E         p.640

          .         .         .         .         .         .       g.17188
 ATGACCCAAGAGGATGTCCGACTCATTGGTCTCAGTGCCACCCTACCCAACTATGAAGAT       c.1980
 M  T  Q  E  D  V  R  L  I  G  L  S  A  T  L  P  N  Y  E  D         p.660

          .         .         .         .         .       | 16 .    g.17468
 GTAGCCACCTTTCTACGTGTTGACCCTGCCAAGGGTCTCTTTTACTTTGACAACAG | CTTC    c.2040
 V  A  T  F  L  R  V  D  P  A  K  G  L  F  Y  F  D  N  S  |  F      p.680

          .         .         .         .         .         .       g.17528
 CGTCCAGTGCCTCTGGAACAGACATATGTGGGTATCACAGAGAAAAAAGCTATCAAGCGT       c.2100
 R  P  V  P  L  E  Q  T  Y  V  G  I  T  E  K  K  A  I  K  R         p.700

          .         .         .         .         .         .       g.17588
 TTCCAGATCATGAATGAAATCGTCTATGAAAAAATCATGGAACATGCTGGAAAAAATCAG       c.2160
 F  Q  I  M  N  E  I  V  Y  E  K  I  M  E  H  A  G  K  N  Q         p.720

  | 17       .         .         .         .         .         .    g.18719
  | GTGCTGGTGTTTGTCCACTCCCGGAAGGAGACTGGAAAGACAGCCAGGGCCATCCGGGAC    c.2220
  | V  L  V  F  V  H  S  R  K  E  T  G  K  T  A  R  A  I  R  D      p.740

          .         .         .         .         .         .       g.18779
 ATGTGCCTAGAAAAGGACACTCTGGGTCTGTTTCTGAGGGAGGGCTCAGCCTCCACAGAA       c.2280
 M  C  L  E  K  D  T  L  G  L  F  L  R  E  G  S  A  S  T  E         p.760

          .         .         . | 18       .         .         .    g.19087
 GTCCTGCGAACAGAAGCTGAGCAGTGCAAG | AACCTAGAGCTGAAGGATCTTCTGCCTTAT    c.2340
 V  L  R  T  E  A  E  Q  C  K   | N  L  E  L  K  D  L  L  P  Y      p.780

          .         .         .         .         .         .       g.19147
 GGCTTTGCTATTCATCACGCAGGCATGACCAGGGTTGACCGAACACTCGTGGAGGATCTT       c.2400
 G  F  A  I  H  H  A  G  M  T  R  V  D  R  T  L  V  E  D  L         p.800

          .         .  | 19      .         .         .         .    g.19783
 TTTGCTGATAAACATATTCAG | GTTTTAGTTTCCACAGCAACTCTAGCTTGGGGTGTGAAT    c.2460
 F  A  D  K  H  I  Q   | V  L  V  S  T  A  T  L  A  W  G  V  N      p.820

          .         .         .         .         .         .       g.19843
 CTCCCTGCACATACAGTCATCATCAAAGGCACCCAGGTGTACAGTCCAGAGAAGGGGCGT       c.2520
 L  P  A  H  T  V  I  I  K  G  T  Q  V  Y  S  P  E  K  G  R         p.840

          .         .         .    | 20    .         .         .    g.20072
 TGGACAGAACTGGGAGCACTGGACATTCTGCAG | ATGCTGGGACGTGCCGGAAGACCCCAG    c.2580
 W  T  E  L  G  A  L  D  I  L  Q   | M  L  G  R  A  G  R  P  Q      p.860

          .         .         .         .         .         .       g.20132
 TATGACACCAAGGGTGAAGGCATACTCATCACATCTCATGGGGAGCTACAGTACTACCTG       c.2640
 Y  D  T  K  G  E  G  I  L  I  T  S  H  G  E  L  Q  Y  Y  L         p.880

          .         .         .         .         .         .       g.20192
 TCCCTCCTCAATCAACAACTTCCTATTGAAAGCCAGATGGTTTCAAAGCTTCCTGACATG       c.2700
 S  L  L  N  Q  Q  L  P  I  E  S  Q  M  V  S  K  L  P  D  M         p.900

          .         .         .         .   | 21     .         .    g.20581
 CTCAATGCAGAAATCGTGCTAGGAAATGTCCAGAATGCCAAG | GATGCGGTGAACTGGCTG    c.2760
 L  N  A  E  I  V  L  G  N  V  Q  N  A  K   | D  A  V  N  W  L      p.920

          .         .         .         .         .         .       g.20641
 GGCTATGCCTACCTCTATATCCGAATGCTGCGATCCCCAACCCTCTATGGCATCTCTCAT       c.2820
 G  Y  A  Y  L  Y  I  R  M  L  R  S  P  T  L  Y  G  I  S  H         p.940

          .         .         .         .         .         .       g.20701
 GATGACCTCAAGGGAGATCCCCTGCTGGACCAGCGCCGACTAGATCTGGTTCATACAGCT       c.2880
 D  D  L  K  G  D  P  L  L  D  Q  R  R  L  D  L  V  H  T  A         p.960

          .         .         .         .         .         .       g.20761
 GCCCTGATGCTGGACAAGAACAATCTGGTCAAGTACGACAAGAAGACGGGCAACTTCCAG       c.2940
 A  L  M  L  D  K  N  N  L  V  K  Y  D  K  K  T  G  N  F  Q         p.980

  | 22       .         .         .         .         .         .    g.21240
  | GTGACAGAACTGGGCCGTATAGCCAGCCACTACTACATCACCAATGATACAGTGCAGACT    c.3000
  | V  T  E  L  G  R  I  A  S  H  Y  Y  I  T  N  D  T  V  Q  T      p.1000

          .         .         .         .         .         .       g.21300
 TACAACCAGCTGCTGAAGCCCACCCTGAGTGAGATTGAGCTTTTCAGGGTCTTCTCATTG       c.3060
 Y  N  Q  L  L  K  P  T  L  S  E  I  E  L  F  R  V  F  S  L         p.1020

          .         .         .    | 23    .         .         .    g.21469
 TCCTCTGAGTTCAAGAACATCACAGTGAGAGAG | GAGGAGAAGCTGGAGCTGCAGAAGTTG    c.3120
 S  S  E  F  K  N  I  T  V  R  E   | E  E  K  L  E  L  Q  K  L      p.1040

          .         .         .         .         .     | 24   .    g.21819
 CTGGAGAGGGTGCCTATCCCTGTAAAGGAGAGCATTGAGGAACCCAGTGCTAAG | ATCAAC    c.3180
 L  E  R  V  P  I  P  V  K  E  S  I  E  E  P  S  A  K   | I  N      p.1060

          .         .         .         .         .         .       g.21879
 GTTCTTCTGCAAGCCTTCATCTCACAGCTGAAATTGGAGGGCTTTGCACTGATGGCTGAC       c.3240
 V  L  L  Q  A  F  I  S  Q  L  K  L  E  G  F  A  L  M  A  D         p.1080

          .         | 25         .         .         .         .    g.22632
 ATGGTGTATGTCACACAG | TCGGCTGGCCGGTTGATGCGAGCGATATTTGAAATTGTCCTG    c.3300
 M  V  Y  V  T  Q   | S  A  G  R  L  M  R  A  I  F  E  I  V  L      p.1100

          .         .         .         .         .         .       g.22692
 AACCGAGGTTGGGCACAGCTTACAGACAAGACCCTGAACCTCTGCAAGATGATCGACAAA       c.3360
 N  R  G  W  A  Q  L  T  D  K  T  L  N  L  C  K  M  I  D  K         p.1120

       | 26  .         .         .         .         .         .    g.23057
 CGCAT | GTGGCAGTCCATGTGTCCTCTGCGCCAGTTCCGGAAACTCCCTGAGGAAGTAGTG    c.3420
 R  M  |  W  Q  S  M  C  P  L  R  Q  F  R  K  L  P  E  E  V  V      p.1140

          .         .         .         .         .         .       g.23117
 AAGAAGATTGAGAAGAAGAATTTCCCCTTTGAGCGTCTGTACGACCTGAATCATAATGAG       c.3480
 K  K  I  E  K  K  N  F  P  F  E  R  L  Y  D  L  N  H  N  E         p.1160

      | 27   .         .         .         .         .         .    g.23455
 ATTG | GGGAGCTTATCCGCATGCCAAAGATGGGGAAGACCATCCACAAATATGTCCATCTG    c.3540
 I  G |   E  L  I  R  M  P  K  M  G  K  T  I  H  K  Y  V  H  L      p.1180

          .         .         .         .         .         .       g.23515
 TTTCCCAAGTTGGAGTTGTCAGTGCACCTGCAGCCTATCACACGCTCCACCCTGAAGGTG       c.3600
 F  P  K  L  E  L  S  V  H  L  Q  P  I  T  R  S  T  L  K  V         p.1200

          .         .         .          | 28        .         .    g.23703
 GAGCTGACCATCACGCCAGACTTCCAGTGGGATGAAAAG | GTGCATGGTTCATCCGAGGCT    c.3660
 E  L  T  I  T  P  D  F  Q  W  D  E  K   | V  H  G  S  S  E  A      p.1220

          .         .         .         .         .         .       g.23763
 TTTTGGATTCTGGTGGAGGATGTGGACAGCGAGGTGATTCTGCACCATGAGTATTTTCTC       c.3720
 F  W  I  L  V  E  D  V  D  S  E  V  I  L  H  H  E  Y  F  L         p.1240

          .         .         .         .         .         .       g.23823
 CTCAAGGCCAAGTACGCCCAGGACGAGCACCTCATTACATTCTTCGTGCCTGTCTTTGAA       c.3780
 L  K  A  K  Y  A  Q  D  E  H  L  I  T  F  F  V  P  V  F  E         p.1260

          .         .         .         .          | 29        .    g.24086
 CCGCTGCCCCCTCAGTACTTCATCCGAGTGGTGTCTGACCGCTGGCTCT | CTTGTGAGACC    c.3840
 P  L  P  P  Q  Y  F  I  R  V  V  S  D  R  W  L  S |   C  E  T      p.1280

          .         .         .         .         .         .       g.24146
 CAGCTGCCTGTCTCCTTCCGGCACCTGATCTTGCCGGAGAAGTACCCCCCTCCAACCGAA       c.3900
 Q  L  P  V  S  F  R  H  L  I  L  P  E  K  Y  P  P  P  T  E         p.1300

          .         .         .         .         .         .       g.24206
 CTTTTGGACCTGCAGCCCTTGCCCGTGTCTGCTCTGAGAAACAGTGCCTTTGAGAGTCTT       c.3960
 L  L  D  L  Q  P  L  P  V  S  A  L  R  N  S  A  F  E  S  L         p.1320

          .         .         .         .    | 30    .         .    g.25236
 TACCAAGATAAATTTCCTTTCTTCAATCCCATCCAGACCCAGG | TGTTTAACACTGTATAC    c.4020
 Y  Q  D  K  F  P  F  F  N  P  I  Q  T  Q  V |   F  N  T  V  Y      p.1340

          .         .         .         .         .         .       g.25296
 AACAGTGACGACAACGTGTTTGTGGGGGCCCCCACGGGCAGCGGGAAGACTATTTGTGCA       c.4080
 N  S  D  D  N  V  F  V  G  A  P  T  G  S  G  K  T  I  C  A         p.1360

          .         .         .         .         .         .       g.25356
 GAGTTTGCCATCCTGCGAATGCTGCTGCAGAGCTCGGAGGGGCGCTGTGTGTACATCACC       c.4140
 E  F  A  I  L  R  M  L  L  Q  S  S  E  G  R  C  V  Y  I  T         p.1380

          .         .     | 31   .         .         .         .    g.26010
 CCCATGGAGGCCCTGGCAGAGCAG | GTATACATGGACTGGTACGAGAAGTTCCAGGACAGG    c.4200
 P  M  E  A  L  A  E  Q   | V  Y  M  D  W  Y  E  K  F  Q  D  R      p.1400

          .         .         .         .         .         .       g.26070
 CTCAACAAGAAGGTGGTACTCCTGACAGGCGAGACCAGCACAGACCTGAAGCTGCTGGGC       c.4260
 L  N  K  K  V  V  L  L  T  G  E  T  S  T  D  L  K  L  L  G         p.1420

          .         .         .         .         .         .       g.26130
 AAAGGGAACATTATCATCAGCACCCCTGAGAAGTGGGACATACTTTCCCGGCGATGGAAG       c.4320
 K  G  N  I  I  I  S  T  P  E  K  W  D  I  L  S  R  R  W  K         p.1440

          .         .         .         .         .         .       g.26190
 CAGCGCAAGAACGTGCAGAACATCAACCTCTTCGTGGTGGATGAGGTCCACCTTATCGGG       c.4380
 Q  R  K  N  V  Q  N  I  N  L  F  V  V  D  E  V  H  L  I  G         p.1460

          .   | 32     .         .         .         .         .    g.26603
 GGCGAGAATGGG | CCTGTCTTAGAAGTGATCTGCTCCCGAATGCGCTACATCTCCTCCCAG    c.4440
 G  E  N  G   | P  V  L  E  V  I  C  S  R  M  R  Y  I  S  S  Q      p.1480

          .         .         .         .         .         .       g.26663
 ATTGAGCGGCCCATTCGCATTGTGGCACTCAGCTCTTCGCTCTCCAATGCCAAGGATGTG       c.4500
 I  E  R  P  I  R  I  V  A  L  S  S  S  L  S  N  A  K  D  V         p.1500

          .         .         .         .         .         .       g.26723
 GCCCACTGGCTGGGCTGCAGTGCCACCTCCACCTTCAACTTCCATCCCAATGTGCGTCCC       c.4560
 A  H  W  L  G  C  S  A  T  S  T  F  N  F  H  P  N  V  R  P         p.1520

          .         .     | 33   .         .         .         .    g.26882
 GTCCCCTTGGAGCTGCACATCCAG | GGCTTCAACATCAGCCATACACAAACCCGCCTGCTC    c.4620
 V  P  L  E  L  H  I  Q   | G  F  N  I  S  H  T  Q  T  R  L  L      p.1540

          .         .         .         .         .         .       g.26942
 TCCATGGCCAAGCCTGTGTACCATGCTATCACCAAGCACTCGCCCAAGAAGCCTGTCATT       c.4680
 S  M  A  K  P  V  Y  H  A  I  T  K  H  S  P  K  K  P  V  I         p.1560

          .         .         .         .         .         .       g.27002
 GTCTTTGTGCCGTCTCGCAAGCAGACCCGCCTCACTGCCATTGACATCCTCACCACCTGT       c.4740
 V  F  V  P  S  R  K  Q  T  R  L  T  A  I  D  I  L  T  T  C         p.1580

          .         .    | 34    .         .         .         .    g.27244
 GCAGCAGACATCCAACGGCAGAG | GTTCTTGCACTGCACCGAGAAGGATCTGATTCCGTAC    c.4800
 A  A  D  I  Q  R  Q  R  |  F  L  H  C  T  E  K  D  L  I  P  Y      p.1600

          .         .         .         .         .         .       g.27304
 CTGGAGAAGCTAAGTGACAGCACGCTCAAGGAAACGCTGCTAAATGGGGTGGGCTACCTG       c.4860
 L  E  K  L  S  D  S  T  L  K  E  T  L  L  N  G  V  G  Y  L         p.1620

          .         .         .         .         .      | 35  .    g.28642
 CATGAGGGGCTCAGCCCCATGGAGCGACGCCTGGTGGAGCAGCTCTTCAGCTCAG | GGGCT    c.4920
 H  E  G  L  S  P  M  E  R  R  L  V  E  Q  L  F  S  S  G |   A      p.1640

          .         .         .         .         .         .       g.28702
 ATCCAGGTGGTGGTGGCTTCTCGGAGTCTCTGCTGGGGCATGAACGTGGCTGCCCACCTG       c.4980
 I  Q  V  V  V  A  S  R  S  L  C  W  G  M  N  V  A  A  H  L         p.1660

          .         .         .         .     | 36   .         .    g.31016
 GTAATCATCATGGATACCCAGTACTACAATGGCAAGATCCACGC | CTATGTGGATTACCCC    c.5040
 V  I  I  M  D  T  Q  Y  Y  N  G  K  I  H  A  |  Y  V  D  Y  P      p.1680

          .         .         .         .         .         .       g.31076
 ATCTATGACGTGCTTCAGATGGTGGGCCACGCCAACCGCCCTTTGCAGGACGATGAGGGG       c.5100
 I  Y  D  V  L  Q  M  V  G  H  A  N  R  P  L  Q  D  D  E  G         p.1700

          .         .         .    | 37    .         .         .    g.31588
 CGCTGTGTCATCATGTGTCAGGGCTCCAAGAAG | GATTTCTTCAAGAAGTTCTTATATGAG    c.5160
 R  C  V  I  M  C  Q  G  S  K  K   | D  F  F  K  K  F  L  Y  E      p.1720

          .         .         .         .         .         .       g.31648
 CCATTGCCAGTAGAATCTCACCTGGACCACTGTATGCATGACCACTTCAATGCTGAGATC       c.5220
 P  L  P  V  E  S  H  L  D  H  C  M  H  D  H  F  N  A  E  I         p.1740

          .         .         .         .         .         .       g.31708
 GTCACCAAGACCATTGAGAACAAGCAGGATGCTGTGGACTACCTCACCTGGACCTTTCTG       c.5280
 V  T  K  T  I  E  N  K  Q  D  A  V  D  Y  L  T  W  T  F  L         p.1760

          .         .         .         .    | 38    .         .    g.31865
 TACCGCCGCATGACACAGAACCCCAATTACTACAACCTGCAGG | GCATCTCCCATCGTCAC    c.5340
 Y  R  R  M  T  Q  N  P  N  Y  Y  N  L  Q  G |   I  S  H  R  H      p.1780

          .         .         .         .         .         .       g.31925
 TTGTCGGACCACTTGTCAGAGCTGGTGGAGCAGACCCTGAGTGACCTGGAGCAGTCCAAG       c.5400
 L  S  D  H  L  S  E  L  V  E  Q  T  L  S  D  L  E  Q  S  K         p.1800

          .         .         .         .         .         .       g.31985
 TGCATCAGCATCGAGGACGAGATGGACGTGGCGCCTCTGAACCTAGGCATGATCGCCGCC       c.5460
 C  I  S  I  E  D  E  M  D  V  A  P  L  N  L  G  M  I  A  A         p.1820

          .         .         | 39         .         .         .    g.32233
 TACTATTACATCAACTACACCACCATTG | AGCTCTTCAGCATGTCCCTCAATGCCAAGACC    c.5520
 Y  Y  Y  I  N  Y  T  T  I  E |   L  F  S  M  S  L  N  A  K  T      p.1840

          .         .         .         .         .         .       g.32293
 AAGGTGCGAGGGCTTATCGAGATCATCTCCAATGCAGCAGAGTATGAGAACATTCCCATC       c.5580
 K  V  R  G  L  I  E  I  I  S  N  A  A  E  Y  E  N  I  P  I         p.1860

          .         .         . | 40       .         .         .    g.32639
 CGGCACCATGAAGACAATCTCCTGAGGCAG | TTGGCTCAGAAGGTCCCCCACAAGCTGAAT    c.5640
 R  H  H  E  D  N  L  L  R  Q   | L  A  Q  K  V  P  H  K  L  N      p.1880

          .         .         .         .         .         .       g.32699
 AACCCTAAGTTCAATGATCCGCACGTCAAGACCAACCTGCTCCTGCAGGCTCACTTGTCT       c.5700
 N  P  K  F  N  D  P  H  V  K  T  N  L  L  L  Q  A  H  L  S         p.1900

          .         .         .         .         .     | 41   .    g.32850
 CGCATGCAGCTGAGTGCTGAGTTGCAGTCAGATACGGAGGAAATCCTTAGTAAG | GCAATC    c.5760
 R  M  Q  L  S  A  E  L  Q  S  D  T  E  E  I  L  S  K   | A  I      p.1920

          .         .         .         .         .         .       g.32910
 CGGCTCATCCAGGCCTGCGTGGATGTCCTTTCCAGCAATGGGTGGCTCAGCCCTGCTCTG       c.5820
 R  L  I  Q  A  C  V  D  V  L  S  S  N  G  W  L  S  P  A  L         p.1940

          .         .         .         .         .         .       g.32970
 GCAGCTATGGAACTGGCCCAGATGGTCACCCAAGCCATGTGGTCCAAGGACTCATACCTG       c.5880
 A  A  M  E  L  A  Q  M  V  T  Q  A  M  W  S  K  D  S  Y  L         p.1960

          .         .         .         .         .  | 42      .    g.33327
 AAGCAGCTGCCACACTTCACCTCTGAGCATATCAAACGTTGCACAGACAAG | GGAGTGGAG    c.5940
 K  Q  L  P  H  F  T  S  E  H  I  K  R  C  T  D  K   | G  V  E      p.1980

          .         .         .         .         .         .       g.33387
 AGTGTTTTCGACATCATGGAGATGGAGGATGAAGAACGGAACGCGTTGCTTCAGCTGACT       c.6000
 S  V  F  D  I  M  E  M  E  D  E  E  R  N  A  L  L  Q  L  T         p.2000

          .         .         .         .         .         .       g.33447
 GACAGCCAGATTGCAGATGTGGCTCGCTTTTGTAACCGCTACCCTAATATCGAACTATCT       c.6060
 D  S  Q  I  A  D  V  A  R  F  C  N  R  Y  P  N  I  E  L  S         p.2020

          .         .         .   | 43     .         .         .    g.33602
 TATGAGGTGGTAGATAAGGACAGCATCCGCAG | TGGCGGGCCAGTTGTGGTGCTGGTGCAG    c.6120
 Y  E  V  V  D  K  D  S  I  R  S  |  G  G  P  V  V  V  L  V  Q      p.2040

          .         .         .         .         .     | 44   .    g.35216
 CTGGAGCGAGAGGAGGAAGTCACAGGCCCTGTCATTGCGCCTCTCTTCCCGCAG | AAACGT    c.6180
 L  E  R  E  E  E  V  T  G  P  V  I  A  P  L  F  P  Q   | K  R      p.2060

          .         .         .         .         .         .       g.35276
 GAAGAGGGCTGGTGGGTGGTGATTGGAGATGCCAAGTCCAATAGCCTCATCTCCATCAAG       c.6240
 E  E  G  W  W  V  V  I  G  D  A  K  S  N  S  L  I  S  I  K         p.2080

          .         .        | 45.         .         .         .    g.35437
 AGGCTGACCTTGCAGCAGAAGGCCAAG | GTGAAGTTGGACTTTGTGGCCCCAGCCACTGGT    c.6300
 R  L  T  L  Q  Q  K  A  K   | V  K  L  D  F  V  A  P  A  T  G      p.2100

          .         .         .         .         .         .       g.35497
 GCCCACAACTACACTCTGTACTTCATGAGTGACGCTTACATGGGATGTGACCAGGAGTAC       c.6360
 A  H  N  Y  T  L  Y  F  M  S  D  A  Y  M  G  C  D  Q  E  Y         p.2120

          .         .         .         .         .                 g.35548
 AAATTCAGCGTGGATGTGAAAGAAGCTGAGACAGACAGTGATTCAGATTGA                c.6411
 K  F  S  V  D  V  K  E  A  E  T  D  S  D  S  D  X                  p.2136

          .         .         .         .         .         .       g.35608
 gtcctgaggcatttacttttgggtaaaggagagttgagcctgaattaggaatgtgtacat       c.*60

          .         .         .         .         .         .       g.35668
 tgtaggaatcctggttgtggggaccaggtctgtgggcctcaggtctggccagccagggct       c.*120

          .         .         .         .         .         .       g.35728
 ggtgctgtccccgcctacctccacttcctttcccttgctcactctggatccagtgacagc       c.*180

          .         .         .         .         .         .       g.35788
 aggtgtcatgggtcaagcataaatcatatatagcattttcaggcatgttcctggtagttc       c.*240

          .         .         .         .         .         .       g.35848
 ttttgagtctgacattctaataaaataatttgtagaaaccatttgtctttgtagtgattc       c.*300

          .         .         .         .         .         .       g.35908
 caaattaaaagttttctttctccaacctgagggcacggccaaaaagatctggttattttt       c.*360

          .         .         .         .         .         .       g.35968
 tagccaggaacgtgcttgttaatgagtatgtctggaggacagacctgctcattaggtgtg       c.*420

          .         .         .         .         .         .       g.36028
 ctgtcccctgtagcctcgtgagtcagcccagaggagggtacatgcgactgtggcctggcc       c.*480

          .         .         .         .         .         .       g.36088
 tcagtggtacccacacatcagcactaccacaagaaccaacactgagcctcggaagctaga       c.*540

          .         .         .         .         .         .       g.36148
 tcacaggttaggggtttctctagatgggggttctgaaatttgcagtgtctgctcctggga       c.*600

          .         .         .         .         .         .       g.36208
 ggcagcaccagaaagggcactgaaatgtactagctggatgtgacccagtcttaataaaca       c.*660

          .                                                         g.36224
 ggttttctaatccaga                                                   c.*676

 (downstream sequence)
Legend:
Nucleotide numbering (following the rules of the HGVS for a 'Coding DNA Reference Sequence') is indicated at the right of the sequence, counting the A of the ATG translation initiating Methionine as 1. Every 10th nucleotide is indicated by a "." above the sequence. The Small nuclear ribonucleoprotein 200kDa (U5) protein sequence is shown below the coding DNA sequence, with numbering indicated at the right starting with 1 for the translation initiating Methionine. Every 10th amino acid is shown in bold. The position of introns is indicated by a vertical line, splitting the two exons. The start of the first exon (transcription initiation site) is indicated by a '\', the end of the last exon (poly-A addition site) by a '/'. The exon number is indicated above the first nucleotide(s) of the exon. To aid the description of frame shift variants, all stop codons in the +1 frame are shown in bold while all stop codons in the +2 frame are underlined.

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