### LOVD-version 3000-30b ### Full data download ### To import, do not remove or alter this header ### ## Filter: (gene_public = CDC20) # charset = UTF-8 ## Genes ## Do not remove or alter this header ## ## Count = 1 "{{id}}" "{{name}}" "{{chromosome}}" "{{chrom_band}}" "{{imprinting}}" "{{refseq_genomic}}" "{{refseq_UD}}" "{{reference}}" "{{url_homepage}}" "{{url_external}}" "{{allow_download}}" "{{id_hgnc}}" "{{id_entrez}}" "{{id_omim}}" "{{show_hgmd}}" "{{show_genecards}}" "{{show_genetests}}" "{{show_orphanet}}" "{{note_index}}" "{{note_listing}}" "{{refseq}}" "{{refseq_url}}" "{{disclaimer}}" "{{disclaimer_text}}" "{{header}}" "{{header_align}}" "{{footer}}" "{{footer_align}}" "{{created_by}}" "{{created_date}}" "{{edited_by}}" "{{edited_date}}" "{{updated_by}}" "{{updated_date}}" "CDC20" "cell division cycle 20" "1" "p34.1" "unknown" "NC_000001.10" "UD_132455751428" "" "https://www.LOVD.nl/CDC20" "" "1" "1723" "991" "603618" "1" "1" "1" "1" "Establishment of this gene variant database (LSDB) was performed by Johan den Dunnen, supported by Global Variome." "" "g" "https://databases.lovd.nl/shared/refseq/CDC20_codingDNA.html" "1" "" "" "-1" "" "-1" "00001" "2013-05-03 00:00:00" "00006" "2020-10-29 17:01:00" "00000" "2024-02-26 20:06:56" ## Transcripts ## Do not remove or alter this header ## ## Count = 1 "{{id}}" "{{geneid}}" "{{name}}" "{{id_mutalyzer}}" "{{id_ncbi}}" "{{id_ensembl}}" "{{id_protein_ncbi}}" "{{id_protein_ensembl}}" "{{id_protein_uniprot}}" "{{remarks}}" "{{position_c_mrna_start}}" "{{position_c_mrna_end}}" "{{position_c_cds_end}}" "{{position_g_mrna_start}}" "{{position_g_mrna_end}}" "{{created_by}}" "{{created_date}}" "{{edited_by}}" "{{edited_date}}" "00004776" "CDC20" "cell division cycle 20 homolog (S. cerevisiae)" "001" "NM_001255.2" "" "NP_001246.2" "" "" "" "-101" "1574" "1500" "43824626" "43828874" "" "0000-00-00 00:00:00" "" "" ## Diseases ## Do not remove or alter this header ## ## Count = 1 "{{id}}" "{{symbol}}" "{{name}}" "{{inheritance}}" "{{id_omim}}" "{{tissues}}" "{{features}}" "{{remarks}}" "{{created_by}}" "{{created_date}}" "{{edited_by}}" "{{edited_date}}" "05370" "INFF" "infertility, female (INFF)" "" "" "" "" "" "00006" "2017-12-29 16:08:25" "" "" ## Genes_To_Diseases ## Do not remove or alter this header ## ## Count = 1 "{{geneid}}" "{{diseaseid}}" "CDC20" "05370" ## Individuals ## Do not remove or alter this header ## ## Count = 5 "{{id}}" "{{fatherid}}" "{{motherid}}" "{{panelid}}" "{{panel_size}}" "{{license}}" "{{owned_by}}" "{{Individual/Reference}}" "{{Individual/Remarks}}" "{{Individual/Gender}}" "{{Individual/Consanguinity}}" "{{Individual/Origin/Geographic}}" "{{Individual/Age_of_death}}" "{{Individual/VIP}}" "{{Individual/Data_av}}" "{{Individual/Treatment}}" "{{Individual/Origin/Population}}" "{{Individual/Individual_ID}}" "00315870" "" "" "" "1" "" "00006" "{PMID:Zhao 2020:32666501}" "2-generation family, 1 affected, unaffected parents" "F" "yes" "China" "" "0" "" "" "" "Fam1" "00315871" "" "" "" "1" "" "00006" "{PMID:Zhao 2020:32666501}" "2-generation family, 1 affected, unaffected parents" "F" "yes" "China" "" "0" "" "" "" "Fam2" "00315872" "" "" "" "1" "" "00006" "{PMID:Zhao 2020:32666501}" "2-generation family, 1 affected, unaffected heterozygous carrier parents" "F" "" "China" "" "0" "" "" "" "Fam3" "00315873" "" "" "" "1" "" "00006" "{PMID:Zhao 2020:32666501}" "2-generation family, 1 affected, unaffected heterozygous carrier parents" "F" "" "China" "" "0" "" "" "" "Fam4" "00315874" "" "" "" "1" "" "00006" "{PMID:Zhao 2020:32666501}" "2-generation family, 1 affected, unaffected heterozygous carrier parents" "F" "" "China" "" "0" "" "" "" "Fam5" ## Individuals_To_Diseases ## Do not remove or alter this header ## ## Count = 5 "{{individualid}}" "{{diseaseid}}" "00315870" "05370" "00315871" "05370" "00315872" "05370" "00315873" "05370" "00315874" "05370" ## Phenotypes ## Do not remove or alter this header ## ## Note: Only showing Phenotype columns active for Diseases 05370 ## Count = 5 "{{id}}" "{{diseaseid}}" "{{individualid}}" "{{owned_by}}" "{{Phenotype/Inheritance}}" "{{Phenotype/Age}}" "{{Phenotype/Additional}}" "{{Phenotype/Age/Onset}}" "{{Phenotype/Onset}}" "{{Phenotype/Protein}}" "{{Phenotype/Enzyme/CPK}}" "{{Phenotype/Heart/Myocardium}}" "{{Phenotype/Lung}}" "{{Phenotype/Diagnosis/Definite}}" "{{Phenotype/Diagnosis/Initial}}" "0000239615" "05370" "00315870" "00006" "Familial, autosomal recessive" "" "see paper; ..., female infertility" "" "" "" "" "" "" "" "infertility" "0000239616" "05370" "00315871" "00006" "Familial, autosomal recessive" "" "see paper; ..., female infertility" "" "" "" "" "" "" "" "infertility" "0000239617" "05370" "00315872" "00006" "Familial, autosomal recessive" "" "see paper; ..., female infertility" "" "" "" "" "" "" "" "infertility" "0000239618" "05370" "00315873" "00006" "Familial, autosomal recessive" "" "see paper; ..., female infertility" "" "" "" "" "" "" "" "infertility" "0000239619" "05370" "00315874" "00006" "Familial, autosomal recessive" "" "see paper; ..., female infertility" "" "" "" "" "" "" "" "infertility" ## Screenings ## Do not remove or alter this header ## ## Count = 5 "{{id}}" "{{individualid}}" "{{variants_found}}" "{{owned_by}}" "{{created_by}}" "{{created_date}}" "{{edited_by}}" "{{edited_date}}" "{{Screening/Technique}}" "{{Screening/Template}}" "{{Screening/Tissue}}" "{{Screening/Remarks}}" "0000317050" "00315870" "1" "00006" "00006" "2020-10-29 17:19:22" "" "" "SEQ;SEQ-NG" "DNA" "" "WES" "0000317051" "00315871" "1" "00006" "00006" "2020-10-29 17:19:22" "" "" "SEQ;SEQ-NG" "DNA" "" "WES" "0000317052" "00315872" "1" "00006" "00006" "2020-10-29 17:19:22" "" "" "SEQ" "DNA" "" "" "0000317053" "00315873" "1" "00006" "00006" "2020-10-29 17:19:22" "" "" "SEQ" "DNA" "" "" "0000317054" "00315874" "1" "00006" "00006" "2020-10-29 17:19:22" "" "" "SEQ" "DNA" "" "" ## Screenings_To_Genes ## Do not remove or alter this header ## ## Count = 5 "{{screeningid}}" "{{geneid}}" "0000317050" "CDC20" "0000317051" "CDC20" "0000317052" "CDC20" "0000317053" "CDC20" "0000317054" "CDC20" ## Variants_On_Genome ## Do not remove or alter this header ## ## Please note that not necessarily all variants found in the given individuals are shown. This output is restricted to variants in the selected gene. ## Count = 13 "{{id}}" "{{allele}}" "{{effectid}}" "{{chromosome}}" "{{position_g_start}}" "{{position_g_end}}" "{{type}}" "{{average_frequency}}" "{{owned_by}}" "{{VariantOnGenome/DBID}}" "{{VariantOnGenome/DNA}}" "{{VariantOnGenome/Frequency}}" "{{VariantOnGenome/Reference}}" "{{VariantOnGenome/Restriction_site}}" "{{VariantOnGenome/Published_as}}" "{{VariantOnGenome/Remarks}}" "{{VariantOnGenome/Genetic_origin}}" "{{VariantOnGenome/Segregation}}" "{{VariantOnGenome/dbSNP}}" "{{VariantOnGenome/VIP}}" "{{VariantOnGenome/Methylation}}" "{{VariantOnGenome/ISCN}}" "{{VariantOnGenome/DNA/hg38}}" "{{VariantOnGenome/ClinVar}}" "{{VariantOnGenome/ClinicalClassification}}" "{{VariantOnGenome/ClinicalClassification/Method}}" "0000347857" "0" "50" "1" "43830946" "43830946" "subst" "0" "02327" "ELOVL1_000001" "g.43830946T>A" "" "" "" "" "VKGL data sharing initiative Nederland" "CLASSIFICATION record" "" "" "0" "" "" "g.43365275T>A" "" "VUS" "" "0000699232" "3" "90" "1" "43825990" "43825990" "subst" "4.06062E-6" "00006" "CDC20_000003" "g.43825990A>G" "" "{PMID:Zhao 2020:32666501}" "" "" "" "Germline" "" "" "0" "" "" "g.43360319A>G" "" "pathogenic (recessive)" "" "0000699233" "3" "90" "1" "43827978" "43827978" "subst" "0" "00006" "CDC20_000007" "g.43827978T>G" "" "{PMID:Zhao 2020:32666501}" "" "" "" "Germline" "" "" "0" "" "" "g.43362307T>G" "" "pathogenic (recessive)" "" "0000699234" "21" "90" "1" "43825756" "43825756" "subst" "0" "00006" "CDC20_000002" "g.43825756C>T" "" "{PMID:Zhao 2020:32666501}" "" "" "" "Germline" "" "" "0" "" "" "g.43360085C>T" "" "pathogenic (recessive)" "" "0000699235" "21" "90" "1" "43826226" "43826229" "dup" "0" "00006" "CDC20_000004" "g.43826226_43826229dup" "" "{PMID:Zhao 2020:32666501}" "" "813_814insAGTG" "" "Germline" "" "" "0" "" "" "g.43360555_43360558dup" "" "pathogenic (recessive)" "" "0000699236" "21" "90" "1" "43826520" "43826520" "subst" "8.93379E-5" "00006" "CDC20_000005" "g.43826520G>A" "" "{PMID:Zhao 2020:32666501}" "" "" "" "Germline" "" "" "0" "" "" "g.43360849G>A" "" "pathogenic (recessive)" "" "0000699237" "11" "90" "1" "43826520" "43826520" "subst" "8.93379E-5" "00006" "CDC20_000005" "g.43826520G>A" "" "{PMID:Zhao 2020:32666501}" "" "" "" "Germline" "" "" "0" "" "" "g.43360849G>A" "" "pathogenic (recessive)" "" "0000699238" "11" "90" "1" "43826520" "43826520" "subst" "8.93379E-5" "00006" "CDC20_000005" "g.43826520G>A" "" "{PMID:Zhao 2020:32666501}" "" "" "" "Germline" "" "" "0" "" "" "g.43360849G>A" "" "pathogenic (recessive)" "" "0000699239" "11" "90" "1" "43826889" "43826892" "del" "0" "00006" "CDC20_000006" "g.43826889_43826892del" "" "{PMID:Zhao 2020:32666501}" "" "1176_1179delTCTG" "" "Germline" "" "" "0" "" "" "g.43361218_43361221del" "" "pathogenic (recessive)" "" "0000799373" "0" "30" "1" "43829730" "43829730" "subst" "0.000255821" "01943" "CDC20_000008" "g.43829730T>C" "" "" "" "ELOVL1(NM_001256399.1):c.697A>G (p.I233V)" "VKGL data sharing initiative Nederland" "CLASSIFICATION record" "" "" "" "" "" "" "" "likely benign" "" "0000911078" "0" "30" "1" "43831227" "43831227" "subst" "0.000259886" "02330" "CDC20_000009" "g.43831227C>G" "" "" "" "ELOVL1(NM_001256399.2):c.46+8G>C" "VKGL data sharing initiative Nederland" "CLASSIFICATION record" "" "" "" "" "" "" "" "likely benign" "" "0000947252" "0" "30" "1" "43831228" "43831228" "subst" "0.00164861" "02330" "CDC20_000010" "g.43831228G>A" "" "" "" "ELOVL1(NM_001256399.2):c.46+7C>T" "VKGL data sharing initiative Nederland" "CLASSIFICATION record" "" "" "" "" "" "" "" "likely benign" "" "0000961058" "0" "30" "1" "43830676" "43830676" "subst" "0" "02330" "CDC20_000011" "g.43830676G>A" "" "" "" "ELOVL1(NM_001256399.2):c.241C>T (p.L81=)" "VKGL data sharing initiative Nederland" "CLASSIFICATION record" "" "" "" "" "" "" "" "likely benign" "" ## Variants_On_Transcripts ## Do not remove or alter this header ## ## Please note that not necessarily all variants found in the given individuals are shown. This output is restricted to variants in the selected gene. ## Note: Only showing Variants_On_Transcript columns active for Genes CDC20 ## Count = 13 "{{id}}" "{{transcriptid}}" "{{effectid}}" "{{position_c_start}}" "{{position_c_start_intron}}" "{{position_c_end}}" "{{position_c_end_intron}}" "{{VariantOnTranscript/DNA}}" "{{VariantOnTranscript/RNA}}" "{{VariantOnTranscript/Protein}}" "{{VariantOnTranscript/Exon}}" "0000347857" "00004776" "50" "3646" "0" "3646" "0" "c.*2146T>A" "r.(=)" "p.(=)" "" "0000699232" "00004776" "90" "683" "0" "683" "0" "c.683A>G" "r.(?)" "p.(Tyr228Cys)" "" "0000699233" "00004776" "90" "1316" "0" "1316" "0" "c.1316T>G" "r.(?)" "p.(Leu439Arg)" "" "0000699234" "00004776" "90" "544" "0" "544" "0" "c.544C>T" "r.(?)" "p.(Arg182*)" "" "0000699235" "00004776" "90" "813" "0" "814" "0" "c.813_814insAGTG" "r.(?)" "p.(Gly272Serfs*24)" "" "0000699236" "00004776" "90" "965" "0" "965" "0" "c.965G>A" "r.(?)" "p.(Arg322Gln)" "" "0000699237" "00004776" "90" "965" "0" "965" "0" "c.965G>A" "r.(?)" "p.(Arg322Gln)" "" "0000699238" "00004776" "90" "965" "0" "965" "0" "c.965G>A" "r.(?)" "p.(Arg322Gln)" "" "0000699239" "00004776" "90" "1176" "0" "1179" "0" "c.1176_1179del" "r.(?)" "p.(Cys392*)" "" "0000799373" "00004776" "30" "2430" "0" "2430" "0" "c.*930T>C" "r.(=)" "p.(=)" "" "0000911078" "00004776" "30" "3927" "0" "3927" "0" "c.*2427C>G" "r.(=)" "p.(=)" "" "0000947252" "00004776" "30" "3928" "0" "3928" "0" "c.*2428G>A" "r.(=)" "p.(=)" "" "0000961058" "00004776" "30" "3376" "0" "3376" "0" "c.*1876G>A" "r.(=)" "p.(=)" "" ## Screenings_To_Variants ## Do not remove or alter this header ## ## Count = 8 "{{screeningid}}" "{{variantid}}" "0000317050" "0000699232" "0000317051" "0000699233" "0000317052" "0000699234" "0000317052" "0000699237" "0000317053" "0000699235" "0000317053" "0000699238" "0000317054" "0000699236" "0000317054" "0000699239"