### LOVD-version 3000-30b ### Full data download ### To import, do not remove or alter this header ### ## Filter: (gene_public = GMNN) # charset = UTF-8 ## Genes ## Do not remove or alter this header ## ## Count = 1 "{{id}}" "{{name}}" "{{chromosome}}" "{{chrom_band}}" "{{imprinting}}" "{{refseq_genomic}}" "{{refseq_UD}}" "{{reference}}" "{{url_homepage}}" "{{url_external}}" "{{allow_download}}" "{{id_hgnc}}" "{{id_entrez}}" "{{id_omim}}" "{{show_hgmd}}" "{{show_genecards}}" "{{show_genetests}}" "{{show_orphanet}}" "{{note_index}}" "{{note_listing}}" "{{refseq}}" "{{refseq_url}}" "{{disclaimer}}" "{{disclaimer_text}}" "{{header}}" "{{header_align}}" "{{footer}}" "{{footer_align}}" "{{created_by}}" "{{created_date}}" "{{edited_by}}" "{{edited_date}}" "{{updated_by}}" "{{updated_date}}" "GMNN" "geminin, DNA replication inhibitor" "6" "p21.32" "unknown" "NG_030440.1" "UD_136087255710" "" "https://www.LOVD.nl/GMNN" "" "1" "17493" "51053" "602842" "1" "1" "1" "1" "Establishment of this gene variant database (LSDB) was supported by the Leiden University Medical Center (LUMC), Leiden, Nederland." "" "g" "http://databases.lovd.nl/shared/refseq/GMNN_codingDNA.html" "1" "" "" "-1" "" "-1" "00001" "2013-05-03 00:00:00" "00006" "2017-01-06 20:10:41" "00000" "2026-01-20 18:57:21" ## Transcripts ## Do not remove or alter this header ## ## Count = 1 "{{id}}" "{{geneid}}" "{{name}}" "{{id_mutalyzer}}" "{{id_ncbi}}" "{{id_ensembl}}" "{{id_protein_ncbi}}" "{{id_protein_ensembl}}" "{{id_protein_uniprot}}" "{{remarks}}" "{{position_c_mrna_start}}" "{{position_c_mrna_end}}" "{{position_c_cds_end}}" "{{position_g_mrna_start}}" "{{position_g_mrna_end}}" "{{created_by}}" "{{created_date}}" "{{edited_by}}" "{{edited_date}}" "00008628" "GMNN" "transcript variant 1" "001" "NM_015895.4" "" "NP_056979.1" "" "" "" "-339" "930" "630" "24775159" "24786327" "" "0000-00-00 00:00:00" "" "" ## Diseases ## Do not remove or alter this header ## ## Count = 2 "{{id}}" "{{symbol}}" "{{name}}" "{{inheritance}}" "{{id_omim}}" "{{tissues}}" "{{features}}" "{{remarks}}" "{{created_by}}" "{{created_date}}" "{{edited_by}}" "{{edited_date}}" "05169" "MGORS" "Meier-Gorlin syndrome (MGORS)" "" "" "" "" "" "00006" "2016-05-26 15:16:56" "" "" "06692" "MGORS6" "Meier-Gorlin syndrome 6" "AD" "616835" "" "" "" "00006" "2021-12-10 23:20:41" "" "" ## Genes_To_Diseases ## Do not remove or alter this header ## ## Count = 1 "{{geneid}}" "{{diseaseid}}" "GMNN" "06692" ## Individuals ## Do not remove or alter this header ## ## Count = 3 "{{id}}" "{{fatherid}}" "{{motherid}}" "{{panelid}}" "{{panel_size}}" "{{license}}" "{{owned_by}}" "{{Individual/Reference}}" "{{Individual/Remarks}}" "{{Individual/Gender}}" "{{Individual/Consanguinity}}" "{{Individual/Origin/Geographic}}" "{{Individual/Age_of_death}}" "{{Individual/VIP}}" "{{Individual/Data_av}}" "{{Individual/Treatment}}" "{{Individual/Origin/Population}}" "{{Individual/Individual_ID}}" "00065288" "" "" "" "1" "" "01604" "{PMID:Burrage 2015:26637980}, {DOI:Burrage 2015:10.1016/j.ajhg.2015.11.006}" "2-generation family, 1 affected, unaffected non-carrier parents (mother had multiple spontaneous miscarriages)" "F" "?" "" ">00y34m" "0" "" "" "" "" "00065295" "" "" "" "1" "" "01604" "{PMID:Burrage 2015:26637980}, {DOI:Burrage 2015:10.1016/j.ajhg.2015.11.006}" "2-generation family, 1 affected, unaffected non-carrier parent; previously described by Bongers (patient 2) and de Munnik (subject 2)" "M" "" "" ">17y" "0" "" "" "" "" "00065297" "" "" "" "1" "" "01604" "{PMID:Burrage 2015:26637980}, {DOI:Burrage 2015:10.1016/j.ajhg.2015.11.006}" "2-generation family, 1 affected, unaffected non-carrier parent" "F" "no" "" ">03y04m" "0" "" "" "Dutch" "" ## Individuals_To_Diseases ## Do not remove or alter this header ## ## Count = 3 "{{individualid}}" "{{diseaseid}}" "00065288" "05169" "00065295" "05169" "00065297" "05169" ## Phenotypes ## Do not remove or alter this header ## ## Note: Only showing Phenotype columns active for Diseases 05169, 06692 ## Count = 3 "{{id}}" "{{diseaseid}}" "{{individualid}}" "{{owned_by}}" "{{Phenotype/Inheritance}}" "{{Phenotype/Age}}" "{{Phenotype/Additional}}" "{{Phenotype/Age/Onset}}" "{{Phenotype/Age/Diagnosis}}" "{{Phenotype/Onset}}" "{{Phenotype/Protein}}" "{{Phenotype/Enzyme/CPK}}" "{{Phenotype/Heart/Myocardium}}" "{{Phenotype/Lung}}" "{{Phenotype/Diagnosis/Definite}}" "{{Phenotype/Diagnosis/Initial}}" "0000051395" "05169" "00065288" "01604" "Familial, autosomal dominant" "00y34m" "short stature (HP:0004322), microtia (HP:0008551), patella aplasia (HP:0006443), low birth weight (HP:0001518), low weight (HP:0004325), reduced head circumference (HP:0000252), delayed bone age (HP:0002750), frontal bossing (HP:?) or high forehead (HP:0000348), down-slanted palpebral fissures (HP:0000494), posteriorly rotated ears (HP:0000358), upturned nose (HP:0000463), hypoplastic nares (HP:0000430), full lips (HP:0012471), micro-/retrognathia (HP:0000308), no motor delay (-HP:0001270), no speech delay (-HP:0000750), no pulmonary emphysema (-HP:0002097), laryngomalacia (HP:0001601), tracheo-/bronchomalacia (HP:0002786), feeding problems in infancy (HP:0011968), failure to thrive (HP:0001508), gastresophageal reflux (HP:0002020), abnormal genitalia (HP:0010460), hypoplastic labia majora (HP:0000059), trichiasis (HP:0001128), nanophthalmos (HP:0000568)" "" "" "" "" "" "" "" "" "" "0000051410" "05169" "00065295" "01604" "Familial, autosomal dominant" "17y" "short stature (HP:0004322), microtia (HP:0008551), patella aplasia (HP:0006443), low birth weight (HP:0001518), reduced birth lengt (HP:?), birth head circumference (HP:0011451), low weight (HP:0004325), delayed bone age (HP:0002750), frontal bossing (HP:?) or high forehead (HP:0000348), no down-slanted palpebral fissures (-HP:0000494), no posteriorly rotated ears (-HP:0000358), no upturned nose (-HP:0000463), hypoplastic nares (HP:0000430), full lips (HP:0012471), micro-/retrognathia (HP:0000308), motor delay (HP:0001270), speech delay (HP:0000750), developmental assessment (HP:?), pulmonary emphysema (HP:0002097), no laryngomalacia (-HP:0001601), no tracheo-/bronchomalacia (-HP:0002786), feeding problems in infancy (HP:0011968), failure to thrive (HP:0001508), no gastresophageal reflux (-HP:0002020), no abnormal genitalia (-HP:0010460), hypospadias (HP:0000047), cryptorchidism (HP:0000028), no rIncreased/marked lumbar lordosis (HP:0002938) Urethral stenosis/\r\ndysplasia (HP:0008661)enal anomalies (-HP:0000077)," "" "00y04m" "" "" "" "" "" "" "" "0000051412" "05169" "00065297" "01604" "Familial, autosomal dominant" "03y04m" "short stature (HP:0004322), microtia (HP:0008551), patella aplasia (HP:0006443), reduced birth weight (HP:0001518), reduced birth lengt (HP:?), reduced weight (HP:0004325), reduced head circumference (HP:0000252), frontal bossing (HP:?) or high forehead (HP:0000348), no down-slanted palpebral fissures (-HP:0000494), posteriorly rotated ears (HP:0000358), no upturned nose (-HP:0000463), hypoplastic nares (HP:0000430), full lips (HP:0012471), micro-/retrognathia (HP:0000308), motor delay (HP:0001270), speech delay (HP:0000750), developmental assessment IQ= 59 at age 14 years (HP:?), no pulmonary emphysema (-HP:0002097), no laryngomalacia (-HP:0001601), no tracheo-/bronchomalacia (-HP:0002786), feeding problems in infancy (HP:0011968), no failure to thrive (-HP:0001508), no gastresophageal reflux (-HP:0002020), no renal anomalies (HP:0000077\r\n), Increased/marked lumbar lordosis (HP:0002938), bilateral congenital hip subluxation (HP:0030043), strabismus (HP:0000486), cleft palate (palatum molle) (HP:0000175)" "" "03y" "" "" "" "" "" "" "" ## Screenings ## Do not remove or alter this header ## ## Count = 3 "{{id}}" "{{individualid}}" "{{variants_found}}" "{{owned_by}}" "{{created_by}}" "{{created_date}}" "{{edited_by}}" "{{edited_date}}" "{{Screening/Technique}}" "{{Screening/Template}}" "{{Screening/Tissue}}" "{{Screening/Remarks}}" "0000065441" "00065288" "1" "01604" "01604" "2016-05-26 15:49:46" "" "" "SEQ;SEQ-NG-I;Western" "DNA" "" "" "0000065448" "00065295" "1" "01604" "01604" "2016-05-27 10:52:31" "" "" "SEQ;SEQ-NG-I;Western" "DNA" "" "" "0000065450" "00065297" "1" "01604" "01604" "2016-05-27 11:16:15" "" "" "SEQ;SEQ-NG-I;Western" "DNA" "" "" ## Screenings_To_Genes ## Do not remove or alter this header ## ## Count = 3 "{{screeningid}}" "{{geneid}}" "0000065441" "GMNN" "0000065448" "GMNN" "0000065450" "GMNN" ## Variants_On_Genome ## Do not remove or alter this header ## ## Please note that not necessarily all variants found in the given individuals are shown. This output is restricted to variants in the selected gene. ## Count = 10 "{{id}}" "{{allele}}" "{{effectid}}" "{{chromosome}}" "{{position_g_start}}" "{{position_g_end}}" "{{type}}" "{{average_frequency}}" "{{owned_by}}" "{{VariantOnGenome/DBID}}" "{{VariantOnGenome/DNA}}" "{{VariantOnGenome/Frequency}}" "{{VariantOnGenome/Reference}}" "{{VariantOnGenome/Restriction_site}}" "{{VariantOnGenome/Published_as}}" "{{VariantOnGenome/Remarks}}" "{{VariantOnGenome/Genetic_origin}}" "{{VariantOnGenome/Segregation}}" "{{VariantOnGenome/dbSNP}}" "{{VariantOnGenome/VIP}}" "{{VariantOnGenome/Methylation}}" "{{VariantOnGenome/ISCN}}" "{{VariantOnGenome/DNA/hg38}}" "{{VariantOnGenome/ClinVar}}" "{{VariantOnGenome/ClinicalClassification}}" "{{VariantOnGenome/ClinicalClassification/Method}}" "0000097129" "1" "90" "6" "24777490" "24777490" "subst" "0" "01604" "GMNN_000002" "g.24777490A>T" "" "{PMID:Burrage 2015:26637980}, {DOI:Burrage 2015:10.1016/j.ajhg.2015.11.006}" "" "" "" "De novo" "-" "" "0" "" "" "g.24777262A>T" "" "pathogenic" "" "0000097137" "1" "90" "6" "24777509" "24777512" "del" "0" "01604" "GMNN_000001" "g.24777509_24777512del" "" "{PMID:Burrage 2015:26637980}, {DOI:Burrage 2015:10.1016/j.ajhg.2015.11.006}" "" "35_38delTCAA" "" "De novo" "-" "" "0" "" "" "g.24777281_24777284del" "" "pathogenic" "" "0000097139" "1" "90" "6" "24777524" "24777524" "subst" "0" "01604" "GMNN_000003" "g.24777524A>G" "" "{PMID:Burrage 2015:26637980}, {DOI:Burrage 2015:10.1016/j.ajhg.2015.11.006}" "" "" "" "De novo" "-" "" "0" "" "" "g.24777296A>G" "" "pathogenic" "" "0000977121" "0" "50" "6" "24784733" "24784733" "subst" "0" "01804" "GMNN_000006" "g.24784733A>T" "" "" "" "GMNN(NM_015895.5):c.419A>T (p.(Glu140Val))" "VKGL data sharing initiative Nederland" "CLASSIFICATION record" "" "" "" "" "" "" "" "VUS" "" "0000995595" "0" "30" "6" "24781777" "24781777" "subst" "0" "01804" "GMNN_000007" "g.24781777A>G" "" "" "" "GMNN(NM_015895.4):c.202A>G (p.(Ile68Val))" "VKGL data sharing initiative Nederland" "CLASSIFICATION record" "" "" "" "" "" "" "" "likely benign" "" "0000995596" "0" "30" "6" "24784712" "24784712" "subst" "4.06745E-5" "01804" "GMNN_000008" "g.24784712G>A" "" "" "" "GMNN(NM_015895.4):c.398G>A (p.(Arg133His))" "VKGL data sharing initiative Nederland" "CLASSIFICATION record" "" "" "" "" "" "" "" "likely benign" "" "0000995597" "0" "30" "6" "24784739" "24784739" "subst" "1.62752E-5" "01804" "GMNN_000009" "g.24784739C>A" "" "" "" "GMNN(NM_015895.4):c.425C>A (p.(Ala142Glu))" "VKGL data sharing initiative Nederland" "CLASSIFICATION record" "" "" "" "" "" "" "" "likely benign" "" "0000995598" "0" "30" "6" "24785863" "24785863" "subst" "0.000228007" "01804" "GMNN_000010" "g.24785863A>G" "" "" "" "GMNN(NM_015895.4):c.469-3A>G (p.?)" "VKGL data sharing initiative Nederland" "CLASSIFICATION record" "" "" "" "" "" "" "" "likely benign" "" "0000995599" "0" "50" "6" "24785865" "24785865" "subst" "0" "01804" "GMNN_000011" "g.24785865G>C" "" "" "" "GMNN(NM_015895.4):c.469-1G>C (p.?)" "VKGL data sharing initiative Nederland" "CLASSIFICATION record" "" "" "" "" "" "" "" "VUS" "" "0001064509" "0" "30" "6" "24785863" "24785863" "subst" "0.000228007" "02325" "GMNN_000010" "g.24785863A>G" "" "" "" "GMNN(NM_015895.4):c.469-3A>G (p.?)" "VKGL data sharing initiative Nederland" "CLASSIFICATION record" "" "" "" "" "" "" "" "likely benign" "" ## Variants_On_Transcripts ## Do not remove or alter this header ## ## Please note that not necessarily all variants found in the given individuals are shown. This output is restricted to variants in the selected gene. ## Note: Only showing Variants_On_Transcript columns active for Genes GMNN ## Count = 10 "{{id}}" "{{transcriptid}}" "{{effectid}}" "{{position_c_start}}" "{{position_c_start_intron}}" "{{position_c_end}}" "{{position_c_end_intron}}" "{{VariantOnTranscript/DNA}}" "{{VariantOnTranscript/RNA}}" "{{VariantOnTranscript/Protein}}" "{{VariantOnTranscript/Exon}}" "0000097129" "00008628" "90" "16" "0" "16" "0" "c.16A>T" "r.(?)" "p.(Lys6*)" "2" "0000097137" "00008628" "90" "35" "0" "38" "0" "c.35_38del" "r.(?)" "p.(Ile12Lysfs*4)" "2" "0000097139" "00008628" "90" "50" "0" "50" "0" "c.50A>G" "r.(?)" "p.(Lys17Arg)" "2" "0000977121" "00008628" "50" "419" "0" "419" "0" "c.419A>T" "r.(?)" "p.(Glu140Val)" "" "0000995595" "00008628" "30" "202" "0" "202" "0" "c.202A>G" "r.(?)" "p.(Ile68Val)" "" "0000995596" "00008628" "30" "398" "0" "398" "0" "c.398G>A" "r.(?)" "p.(Arg133His)" "" "0000995597" "00008628" "30" "425" "0" "425" "0" "c.425C>A" "r.(?)" "p.(Ala142Glu)" "" "0000995598" "00008628" "30" "469" "-3" "469" "-3" "c.469-3A>G" "r.spl?" "p.?" "" "0000995599" "00008628" "50" "469" "-1" "469" "-1" "c.469-1G>C" "r.spl?" "p.?" "" "0001064509" "00008628" "30" "469" "-3" "469" "-3" "c.469-3A>G" "r.spl?" "p.?" "" ## Screenings_To_Variants ## Do not remove or alter this header ## ## Count = 3 "{{screeningid}}" "{{variantid}}" "0000065441" "0000097129" "0000065448" "0000097137" "0000065450" "0000097139"