### LOVD-version 3000-30b ### Full data download ### To import, do not remove or alter this header ###
## Filter: (gene_public = SMARCA1)
# charset = UTF-8
## Genes ## Do not remove or alter this header ##
## Count = 1
"{{id}}" "{{name}}" "{{chromosome}}" "{{chrom_band}}" "{{imprinting}}" "{{refseq_genomic}}" "{{refseq_UD}}" "{{reference}}" "{{url_homepage}}" "{{url_external}}" "{{allow_download}}" "{{id_hgnc}}" "{{id_entrez}}" "{{id_omim}}" "{{show_hgmd}}" "{{show_genecards}}" "{{show_genetests}}" "{{show_orphanet}}" "{{note_index}}" "{{note_listing}}" "{{refseq}}" "{{refseq_url}}" "{{disclaimer}}" "{{disclaimer_text}}" "{{header}}" "{{header_align}}" "{{footer}}" "{{footer_align}}" "{{created_by}}" "{{created_date}}" "{{edited_by}}" "{{edited_date}}" "{{updated_by}}" "{{updated_date}}"
"SMARCA1" "SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1" "X" "q25" "unknown" "NG_012526.1" "UD_132085417286" "" "https://www.LOVD.nl/SMARCA1" "" "1" "11097" "6594" "300012" "1" "1" "1" "1" "This gene sequence variant database has been initiated based on the data reported by Tarpey et al. (2009) A systematic, large-scale resequencing screen of the X-chromosome coding exons in mental retardation. Nat.Genet. 41: 535-543. Establishment of the database was supported by the European Community\'s Seventh Framework Programme (FP7/2007-2013) under grant agreement No 200754 - the GEN2PHEN project.
Establishment of this gene variant database (LSDB) was supported by the Leiden University Medical Center (LUMC), Leiden, Nederland." "" "" "" "1" "" "" "-1" "" "-1" "00000" "2009-03-06 00:00:00" "00006" "2018-01-12 18:14:16" "00000" "2024-10-29 21:08:56"
## Transcripts ## Do not remove or alter this header ##
## Count = 1
"{{id}}" "{{geneid}}" "{{name}}" "{{id_mutalyzer}}" "{{id_ncbi}}" "{{id_ensembl}}" "{{id_protein_ncbi}}" "{{id_protein_ensembl}}" "{{id_protein_uniprot}}" "{{remarks}}" "{{position_c_mrna_start}}" "{{position_c_mrna_end}}" "{{position_c_cds_end}}" "{{position_g_mrna_start}}" "{{position_g_mrna_end}}" "{{created_by}}" "{{created_date}}" "{{edited_by}}" "{{edited_date}}"
"00000569" "SMARCA1" "transcript variant 1" "002" "NM_003069.3" "" "NP_003060.2" "" "" "" "-113" "3973" "3165" "128580478" "128657460" "00000" "2012-09-13 12:33:14" "" ""
## Diseases ## Do not remove or alter this header ##
## Count = 4
"{{id}}" "{{symbol}}" "{{name}}" "{{inheritance}}" "{{id_omim}}" "{{tissues}}" "{{features}}" "{{remarks}}" "{{created_by}}" "{{created_date}}" "{{edited_by}}" "{{edited_date}}"
"00139" "ID" "intellectual disability (ID)" "" "" "" "" "" "00084" "2013-06-04 18:18:07" "00006" "2015-02-09 10:02:49"
"00187" "MRX;IDX" "mental retardation, X-linked (MRX, intellectual disability (IDX))" "" "" "" "X-linked" "" "00006" "2013-09-05 15:56:47" "00006" "2018-12-18 09:23:21"
"00198" "?" "unclassified / mixed" "" "" "" "" "" "00006" "2013-09-13 14:21:47" "00006" "2024-11-23 09:38:12"
"01157" "CHTE" "Hypothyroidism, central, testicular enlargement (CHTE)" "XLR" "300888" "" "" "" "00006" "2014-09-25 23:29:40" "00006" "2021-12-10 21:51:32"
## Genes_To_Diseases ## Do not remove or alter this header ##
## Count = 0
## Individuals ## Do not remove or alter this header ##
## Count = 7
"{{id}}" "{{fatherid}}" "{{motherid}}" "{{panelid}}" "{{panel_size}}" "{{license}}" "{{owned_by}}" "{{Individual/Reference}}" "{{Individual/Remarks}}" "{{Individual/Gender}}" "{{Individual/Consanguinity}}" "{{Individual/Origin/Geographic}}" "{{Individual/Age_of_death}}" "{{Individual/VIP}}" "{{Individual/Data_av}}" "{{Individual/Treatment}}" "{{Individual/Origin/Population}}" "{{Individual/Individual_ID}}"
"00000208" "" "" "" "1" "" "00037" "{PMID:Sun 2011:23143598}, {DOI:Sun 2011:10.1038/ng.2453}" "" "M" "no" "Netherlands" "" "0" "" "" "" ""
"00150219" "" "" "" "1" "" "00006" "{PMID:Karaca 2015:26539891}" "2-generation family, 1 affected, unaffected heterozugous carrier parents" "M" "yes" "" "" "0" "family structure in paper" "" "" "26539891-FamBAB4453"
"00173364" "" "" "" "3" "" "00124" "{PMID:Tarpey 2009:19377476}" "" "M" "" "" "" "0" "for details contact Lucy Raymond (flr24 @ cam.ac.uk)" "" "" "19377476-Pat?"
"00173365" "" "" "" "1" "" "00124" "{PMID:Tarpey 2009:19377476}" "" "M" "" "" "" "0" "for details contact Lucy Raymond (flr24 @ cam.ac.uk)" "" "" "19377476-Pat?"
"00173627" "" "" "" "1" "" "00124" "{PMID:Tarpey 2009:19377476}" "" "M" "" "" "" "0" "for details contact Lucy Raymond (flr24 @ cam.ac.uk)" "" "" "19377476-Pat?"
"00173639" "" "" "" "1" "" "00124" "{PMID:Tarpey 2009:19377476}" "" "M" "" "" "" "0" "for details contact Lucy Raymond (flr24 @ cam.ac.uk)" "" "" "19377476-Pat?"
"00318024" "" "" "" "1" "" "00006" "{PMID:Riazuddin 2017:27457812}" "" "" "yes" "Pakistan" "" "0" "" "" "Punjabi" "PKMR142"
## Individuals_To_Diseases ## Do not remove or alter this header ##
## Count = 7
"{{individualid}}" "{{diseaseid}}"
"00000208" "01157"
"00150219" "00198"
"00173364" "00187"
"00173365" "00187"
"00173627" "00187"
"00173639" "00187"
"00318024" "00139"
## Phenotypes ## Do not remove or alter this header ##
## Note: Only showing Phenotype columns active for Diseases 00139, 00187, 00198, 01157
## Count = 7
"{{id}}" "{{diseaseid}}" "{{individualid}}" "{{owned_by}}" "{{Phenotype/Inheritance}}" "{{Phenotype/Age}}" "{{Phenotype/Additional}}" "{{Phenotype/Age/Onset}}" "{{Phenotype/Birth/Gestational_age_wk}}" "{{Phenotype/Age/Diagnosis}}" "{{Phenotype/Onset}}" "{{Phenotype/Protein}}" "{{Phenotype/Tumor/MSI}}" "{{Phenotype/Enzyme/CPK}}" "{{Phenotype/Heart/Myocardium}}" "{{Phenotype/Lung}}" "{{Phenotype/Diagnosis/Definite}}" "{{Phenotype/Diagnosis/Initial}}" "{{Phenotype/Diagnosis/Criteria}}"
"0000038983" "01157" "00000208" "00006" "Familial, X-linked recessive" "" "central hypothyroidism (FT4 0.50-0.99of lower limit normal), no prolactin deficiency, age sonographic determination testicular volume 17.64y, testicular volume right/left 21/20 (7.3–16ml)" "" "" "3w" "" "" "" "" "" "" "" "" ""
"0000122621" "00198" "00150219" "00006" "Unknown" "" "intellectual diability, microcephaly, spasticity, cortical atrophy, Coffin-Syris-like dysmorphic features" "" "" "" "" "" "" "" "" "" "" "" ""
"0000138228" "00187" "00173364" "00124" "Familial, X-linked" "" "" "" "" "" "" "" "" "" "" "" "" "MRX" ""
"0000138229" "00187" "00173365" "00124" "Familial, X-linked" "" "" "" "" "" "" "" "" "" "" "" "" "MRX" ""
"0000138491" "00187" "00173627" "00124" "Familial, X-linked" "" "" "" "" "" "" "" "" "" "" "" "" "MRX" ""
"0000138503" "00187" "00173639" "00124" "Familial, X-linked" "" "" "" "" "" "" "" "" "" "" "" "" "MRX" ""
"0000241808" "00139" "00318024" "00006" "Familial, autosomal recessive" "" "Moderate ID, aggressive, speaking problem, elongated faces." "" "" "" "" "" "" "" "" "" "" "intellectual disability" ""
## Screenings ## Do not remove or alter this header ##
## Count = 7
"{{id}}" "{{individualid}}" "{{variants_found}}" "{{owned_by}}" "{{created_by}}" "{{created_date}}" "{{edited_by}}" "{{edited_date}}" "{{Screening/Technique}}" "{{Screening/Template}}" "{{Screening/Tissue}}" "{{Screening/Remarks}}"
"0000000209" "00000208" "1" "00037" "00001" "2012-09-13 12:02:03" "" "" "SEQ-NG-I" "DNA" "" ""
"0000151074" "00150219" "1" "00006" "00006" "2018-01-13 12:41:38" "" "" "SEQ-NG-I" "DNA" "" "WES"
"0000174247" "00173364" "1" "00124" "00006" "2009-04-08 14:04:23" "00006" "2009-05-19 12:34:20" "SEQ" "DNA" "" ""
"0000174248" "00173365" "1" "00124" "00006" "2009-04-08 14:04:23" "00006" "2009-05-19 12:33:15" "SEQ" "DNA" "" ""
"0000174510" "00173627" "1" "00124" "00006" "2009-04-08 14:04:23" "00006" "2009-05-19 12:33:15" "SEQ" "DNA" "" ""
"0000174522" "00173639" "1" "00124" "00006" "2009-04-08 14:04:23" "00006" "2009-05-19 12:33:15" "SEQ" "DNA" "" ""
"0000319206" "00318024" "1" "00006" "00006" "2020-11-05 17:52:36" "" "" "SEQ;SEQ-NG" "DNA" "" "WES"
## Screenings_To_Genes ## Do not remove or alter this header ##
## Count = 6
"{{screeningid}}" "{{geneid}}"
"0000151074" "SMARCA1"
"0000174247" "SYTL4"
"0000174248" "TAF7L"
"0000174510" "GNL3L"
"0000174522" "ARMCX5"
"0000319206" "SMARCA1"
## Variants_On_Genome ## Do not remove or alter this header ##
## Please note that not necessarily all variants found in the given individuals are shown. This output is restricted to variants in the selected gene.
## Count = 42
"{{id}}" "{{allele}}" "{{effectid}}" "{{chromosome}}" "{{position_g_start}}" "{{position_g_end}}" "{{type}}" "{{average_frequency}}" "{{owned_by}}" "{{VariantOnGenome/DBID}}" "{{VariantOnGenome/DNA}}" "{{VariantOnGenome/Frequency}}" "{{VariantOnGenome/Reference}}" "{{VariantOnGenome/Restriction_site}}" "{{VariantOnGenome/Published_as}}" "{{VariantOnGenome/Remarks}}" "{{VariantOnGenome/Genetic_origin}}" "{{VariantOnGenome/Segregation}}" "{{VariantOnGenome/dbSNP}}" "{{VariantOnGenome/VIP}}" "{{VariantOnGenome/Methylation}}" "{{VariantOnGenome/ISCN}}" "{{VariantOnGenome/DNA/hg38}}" "{{VariantOnGenome/ClinVar}}" "{{VariantOnGenome/ClinicalClassification}}" "{{VariantOnGenome/ClinicalClassification/Method}}"
"0000002144" "0" "50" "X" "128630998" "128630999" "del" "0" "00037" "SMARCA1_000005" "g.128630998_128630999del" "" "" "" "" "" "Germline" "" "" "" "" "" "g.129497021_129497022del" "" "VUS" ""
"0000003223" "0" "50" "X" "128630976" "128630977" "del" "0" "00037" "SMARCA1_000006" "g.128630976_128630977del" "" "" "" "" "" "Germline" "" "" "" "" "" "g.129496999_129497000del" "" "VUS" ""
"0000244242" "3" "90" "X" "128657341" "128657341" "subst" "0" "00006" "SMARCA1_000007" "g.128657341G>A" "" "{PMID:Karaca 2015:26539891}" "" "NM_003069: c.C7T; p.Q3X" "" "Germline" "" "" "0" "" "" "g.129523364G>A" "" "pathogenic" ""
"0000335466" "0" "50" "X" "128615056" "128615056" "subst" "0.00060478" "01804" "SMARCA1_000008" "g.128615056G>T" "" "" "" "SMARCA1(NM_003069.3):c.2324C>A (p.(Pro775Gln))" "VKGL data sharing initiative Nederland" "CLASSIFICATION record" "" "" "0" "" "" "g.129481079G>T" "" "VUS" ""
"0000401296" "1" "30" "X" "128633717" "128633717" "subst" "0.0193373" "00124" "SMARCA1_000011" "g.128633717T>C" "3/208 cases" "{PMID:Tarpey 2009:19377476}" "" "Q423Q" "recurrent, found 3 times" "Germline" "" "" "0" "" "" "g.129499740T>C" "" "likely benign" ""
"0000401297" "1" "30" "X" "128630745" "128630745" "subst" "0.00127037" "00124" "SMARCA1_000010" "g.128630745G>A" "1/208 cases" "{PMID:Tarpey 2009:19377476}" "" "T536T" "found once, nonrecurrent change" "Germline" "" "" "0" "" "" "g.129496768G>A" "" "likely benign" ""
"0000401298" "1" "50" "X" "128642061" "128642061" "subst" "0.00261775" "00124" "SMARCA1_000012" "g.128642061G>A" "1/208 cases" "{PMID:Tarpey 2009:19377476}" "" "R275C" "found once, nonrecurrent change" "Germline" "" "" "0" "" "" "g.129508084G>A" "" "VUS" ""
"0000401299" "1" "50" "X" "128621095" "128621095" "subst" "2.4884E-5" "00124" "SMARCA1_000009" "g.128621095C>T" "1/208 cases" "{PMID:Tarpey 2009:19377476}" "" "R706H" "found once, nonrecurrent change" "Germline" "" "" "0" "" "" "g.129487118C>T" "" "VUS" ""
"0000573408" "0" "50" "X" "128582408" "128582408" "subst" "5.86985E-6" "02327" "SMARCA1_000013" "g.128582408G>A" "" "" "" "" "VKGL data sharing initiative Nederland" "CLASSIFICATION record" "" "" "" "" "" "g.129448431G>A" "" "VUS" ""
"0000573409" "0" "30" "X" "128602791" "128602791" "subst" "0" "02327" "SMARCA1_000014" "g.128602791T>A" "" "" "" "" "VKGL data sharing initiative Nederland" "CLASSIFICATION record" "" "" "" "" "" "g.129468814T>A" "" "likely benign" ""
"0000573410" "0" "30" "X" "128624163" "128624163" "subst" "0" "02327" "SMARCA1_000015" "g.128624163C>T" "" "" "" "" "VKGL data sharing initiative Nederland" "CLASSIFICATION record" "" "" "" "" "" "g.129490186C>T" "" "likely benign" ""
"0000573411" "0" "50" "X" "128645816" "128645816" "subst" "0" "01943" "SMARCA1_000016" "g.128645816G>C" "" "" "" "SMARCA1(NM_003069.4):c.775C>G (p.R259G)" "VKGL data sharing initiative Nederland" "CLASSIFICATION record" "" "" "" "" "" "g.129511839G>C" "" "VUS" ""
"0000573412" "0" "30" "X" "128657191" "128657191" "subst" "3.39443E-5" "01943" "SMARCA1_000017" "g.128657191C>T" "" "" "" "SMARCA1(NM_003069.4):c.157G>A (p.G53S)" "VKGL data sharing initiative Nederland" "CLASSIFICATION record" "" "" "" "" "" "g.129523214C>T" "" "likely benign" ""
"0000618980" "0" "50" "X" "128630743" "128630743" "subst" "1.74187E-5" "01943" "SMARCA1_000018" "g.128630743G>A" "" "" "" "SMARCA1(NM_003069.4):c.1610C>T (p.P537L)" "VKGL data sharing initiative Nederland" "CLASSIFICATION record" "" "" "" "" "" "g.129496766G>A" "" "VUS" ""
"0000618981" "0" "50" "X" "128645896" "128645896" "subst" "0" "01943" "SMARCA1_000019" "g.128645896G>C" "" "" "" "SMARCA1(NM_003069.4):c.695C>G (p.P232R)" "VKGL data sharing initiative Nederland" "CLASSIFICATION record" "" "" "" "" "" "g.129511919G>C" "" "VUS" ""
"0000624410" "0" "30" "X" "128657183" "128657183" "subst" "2.83004E-5" "01943" "SMARCA1_000020" "g.128657183C>G" "" "" "" "SMARCA1(NM_003069.4):c.165G>C (p.K55N)" "VKGL data sharing initiative Nederland" "CLASSIFICATION record" "" "" "" "" "" "g.129523206C>G" "" "likely benign" ""
"0000659074" "0" "50" "X" "128602779" "128602779" "subst" "5.82744E-6" "02325" "SMARCA1_000021" "g.128602779T>C" "" "" "" "SMARCA1(NM_003069.5):c.2669A>G (p.K890R)" "VKGL data sharing initiative Nederland" "CLASSIFICATION record" "" "" "" "" "" "g.129468802T>C" "" "VUS" ""
"0000659075" "0" "30" "X" "128605187" "128605187" "subst" "3.11278E-5" "01943" "SMARCA1_000022" "g.128605187G>A" "" "" "" "SMARCA1(NM_003069.4):c.2559C>T (p.L853=)" "VKGL data sharing initiative Nederland" "CLASSIFICATION record" "" "" "" "" "" "g.129471210G>A" "" "likely benign" ""
"0000701870" "3" "50" "X" "128657269" "128657269" "subst" "2.32956E-5" "00006" "SMARCA1_000023" "g.128657269C>T" "" "{PMID:Riazuddin 2017:27457812}" "" "" "" "Germline" "" "" "0" "" "" "g.129523292C>T" "" "VUS" ""
"0000728399" "0" "50" "X" "128599852" "128599852" "subst" "3.16142E-5" "02325" "SMARCA1_000024" "g.128599852C>T" "" "" "" "SMARCA1(NM_003069.5):c.2786G>A (p.R929K)" "VKGL data sharing initiative Nederland" "CLASSIFICATION record" "" "" "" "" "" "" "" "VUS" ""
"0000728400" "0" "50" "X" "128602843" "128602843" "subst" "0" "01943" "SMARCA1_000025" "g.128602843T>A" "" "" "" "SMARCA1(NM_003069.4):c.2605A>T (p.I869F)" "VKGL data sharing initiative Nederland" "CLASSIFICATION record" "" "" "" "" "" "" "" "VUS" ""
"0000728401" "0" "50" "X" "128638728" "128638728" "subst" "1.68846E-5" "02325" "SMARCA1_000026" "g.128638728C>T" "" "" "" "SMARCA1(NM_003069.5):c.1150G>A (p.V384M)" "VKGL data sharing initiative Nederland" "CLASSIFICATION record" "" "" "" "" "" "" "" "VUS" ""
"0000809860" "0" "50" "X" "128624133" "128624133" "subst" "0" "01943" "SMARCA1_000027" "g.128624133G>A" "" "" "" "SMARCA1(NM_003069.4):c.1852C>T (p.R618C)" "VKGL data sharing initiative Nederland" "CLASSIFICATION record" "" "" "" "" "" "" "" "VUS" ""
"0000809861" "0" "50" "X" "128630845" "128630845" "subst" "0" "01943" "SMARCA1_000028" "g.128630845G>A" "" "" "" "SMARCA1(NM_003069.4):c.1508C>T (p.S503L)" "VKGL data sharing initiative Nederland" "CLASSIFICATION record" "" "" "" "" "" "" "" "VUS" ""
"0000809862" "0" "30" "X" "128645937" "128645937" "subst" "0.000130095" "01943" "SMARCA1_000029" "g.128645937T>C" "" "" "" "SMARCA1(NM_003069.4):c.654A>G (p.T218=)" "VKGL data sharing initiative Nederland" "CLASSIFICATION record" "" "" "" "" "" "" "" "likely benign" ""
"0000809863" "0" "30" "X" "128657260" "128657260" "subst" "9.87499E-5" "01943" "SMARCA1_000030" "g.128657260C>G" "" "" "" "SMARCA1(NM_003069.4):c.88G>C (p.G30R)" "VKGL data sharing initiative Nederland" "CLASSIFICATION record" "" "" "" "" "" "" "" "likely benign" ""
"0000856330" "0" "30" "X" "128599623" "128599623" "subst" "0.000143506" "01943" "SMARCA1_000031" "g.128599623T>C" "" "" "" "SMARCA1(NM_003069.4):c.2904A>G (p.R968=)" "VKGL data sharing initiative Nederland" "CLASSIFICATION record" "" "" "" "" "" "" "" "likely benign" ""
"0000856331" "0" "30" "X" "128649963" "128649963" "subst" "5.21555E-5" "02327" "SMARCA1_000034" "g.128649963T>C" "" "" "" "" "VKGL data sharing initiative Nederland" "CLASSIFICATION record" "" "" "" "" "" "" "" "likely benign" ""
"0000867024" "0" "30" "X" "128614753" "128614753" "subst" "5.27406E-5" "01943" "SMARCA1_000032" "g.128614753A>G" "" "" "" "SMARCA1(NM_003069.4):c.2367T>C (p.F789=)" "VKGL data sharing initiative Nederland" "CLASSIFICATION record" "" "" "" "" "" "" "" "likely benign" ""
"0000867025" "0" "50" "X" "128631896" "128631896" "subst" "3.92163E-5" "01943" "SMARCA1_000033" "g.128631896G>C" "" "" "" "SMARCA1(NM_003069.4):c.1430C>G (p.T477S), SMARCA1(NM_003069.5):c.1430C>G (p.T477S)" "VKGL data sharing initiative Nederland" "CLASSIFICATION record" "" "" "" "" "" "" "" "VUS" ""
"0000867026" "0" "50" "X" "128631896" "128631896" "subst" "3.92163E-5" "02325" "SMARCA1_000033" "g.128631896G>C" "" "" "" "SMARCA1(NM_003069.4):c.1430C>G (p.T477S), SMARCA1(NM_003069.5):c.1430C>G (p.T477S)" "VKGL data sharing initiative Nederland" "CLASSIFICATION record" "" "" "" "" "" "" "" "VUS" ""
"0000895917" "0" "50" "X" "128630779" "128630779" "subst" "3.36642E-5" "02325" "SMARCA1_000035" "g.128630779C>T" "" "" "" "SMARCA1(NM_003069.5):c.1574G>A (p.R525H)" "VKGL data sharing initiative Nederland" "CLASSIFICATION record" "" "" "" "" "" "" "" "VUS" ""
"0000895918" "0" "30" "X" "128645948" "128645948" "subst" "0" "02327" "SMARCA1_000036" "g.128645948T>C" "" "" "" "" "VKGL data sharing initiative Nederland" "CLASSIFICATION record" "" "" "" "" "" "" "" "likely benign" ""
"0000915600" "0" "50" "X" "128640152" "128640152" "subst" "2.8012E-5" "02327" "SMARCA1_000037" "g.128640152G>A" "" "" "" "" "VKGL data sharing initiative Nederland" "CLASSIFICATION record" "" "" "" "" "" "" "" "VUS" ""
"0000927251" "0" "50" "X" "128582347" "128582347" "subst" "2.25038E-5" "02325" "SMARCA1_000038" "g.128582347C>T" "" "" "" "SMARCA1(NM_003069.5):c.3104G>A (p.R1035K)" "VKGL data sharing initiative Nederland" "CLASSIFICATION record" "" "" "" "" "" "" "" "VUS" ""
"0000984441" "0" "50" "X" "128615113" "128615113" "subst" "0.000131254" "02325" "SMARCA1_000039" "g.128615113T>C" "" "" "" "SMARCA1(NM_003069.5):c.2267A>G (p.N756S)" "VKGL data sharing initiative Nederland" "CLASSIFICATION record" "" "" "" "" "" "" "" "VUS" ""
"0000984442" "0" "50" "X" "128630753" "128630753" "subst" "0" "02325" "SMARCA1_000040" "g.128630753C>T" "" "" "" "SMARCA1(NM_003069.5):c.1600G>A (p.G534R)" "VKGL data sharing initiative Nederland" "CLASSIFICATION record" "" "" "" "" "" "" "" "VUS" ""
"0001006409" "0" "50" "X" "128602767" "128602767" "subst" "0" "01804" "SMARCA1_000041" "g.128602767T>A" "" "" "" "SMARCA1(NM_003069.3):c.2681A>T (p.(Glu894Val))" "VKGL data sharing initiative Nederland" "CLASSIFICATION record" "" "" "" "" "" "" "" "VUS" ""
"0001006410" "0" "50" "X" "128605227" "128605227" "subst" "0" "01804" "SMARCA1_000042" "g.128605227G>A" "" "" "" "SMARCA1(NM_003069.3):c.2519C>T (p.(Pro840Leu))" "VKGL data sharing initiative Nederland" "CLASSIFICATION record" "" "" "" "" "" "" "" "VUS" ""
"0001006411" "0" "10" "X" "128657329" "128657329" "subst" "0" "01804" "SMARCA1_000043" "g.128657329C>T" "" "" "" "SMARCA1(NM_003069.3):c.19G>A (p.(Ala7Thr))" "VKGL data sharing initiative Nederland" "CLASSIFICATION record" "" "" "" "" "" "" "" "benign" ""
"0001006412" "0" "30" "X" "128657340" "128657340" "subst" "7.27596E-6" "01804" "SMARCA1_000044" "g.128657340T>C" "" "" "" "SMARCA1(NM_003069.3):c.8A>G (p.(Gln3Arg))" "VKGL data sharing initiative Nederland" "CLASSIFICATION record" "" "" "" "" "" "" "" "likely benign" ""
"0001015982" "0" "50" "X" "128657301" "128657301" "subst" "0" "02325" "SMARCA1_000045" "g.128657301T>C" "" "" "" "SMARCA1(NM_003069.5):c.47A>G (p.D16G)" "VKGL data sharing initiative Nederland" "CLASSIFICATION record" "" "" "" "" "" "" "" "VUS" ""
## Variants_On_Transcripts ## Do not remove or alter this header ##
## Please note that not necessarily all variants found in the given individuals are shown. This output is restricted to variants in the selected gene.
## Note: Only showing Variants_On_Transcript columns active for Genes SMARCA1
## Count = 42
"{{id}}" "{{transcriptid}}" "{{effectid}}" "{{position_c_start}}" "{{position_c_start_intron}}" "{{position_c_end}}" "{{position_c_end_intron}}" "{{VariantOnTranscript/DNA}}" "{{VariantOnTranscript/RNA}}" "{{VariantOnTranscript/Protein}}" "{{VariantOnTranscript/Exon}}"
"0000002144" "00000569" "50" "1505" "-130" "1505" "-129" "c.1505-130_1505-129del" "r.(=)" "p.(=)" ""
"0000003223" "00000569" "50" "1505" "-129" "1505" "-128" "c.1505-129_1505-128del" "r.(=)" "p.(=)" ""
"0000244242" "00000569" "90" "7" "0" "7" "0" "c.7C>T" "r.(?)" "p.(Gln3*)" ""
"0000335466" "00000569" "50" "2324" "0" "2324" "0" "c.2324C>A" "r.(?)" "p.(Pro775Gln)" ""
"0000401296" "00000569" "30" "1269" "0" "1269" "0" "c.1269A>G" "r.(?)" "p.(=)" "10"
"0000401297" "00000569" "30" "1608" "0" "1608" "0" "c.1608C>T" "r.(?)" "p.(=)" "12"
"0000401298" "00000569" "50" "823" "0" "823" "0" "c.823C>T" "r.(?)" "p.(Arg275Cys)" "7"
"0000401299" "00000569" "50" "2117" "0" "2117" "0" "c.2117G>A" "r.(?)" "p.(Arg706His)" "17"
"0000573408" "00000569" "50" "3043" "0" "3043" "0" "c.3043C>T" "r.(?)" "p.(Arg1015Cys)" ""
"0000573409" "00000569" "30" "2657" "0" "2657" "0" "c.2657A>T" "r.(?)" "p.(Glu886Val)" ""
"0000573410" "00000569" "30" "1822" "0" "1822" "0" "c.1822G>A" "r.(?)" "p.(Ala608Thr)" ""
"0000573411" "00000569" "50" "775" "0" "775" "0" "c.775C>G" "r.(?)" "p.(Arg259Gly)" ""
"0000573412" "00000569" "30" "157" "0" "157" "0" "c.157G>A" "r.(?)" "p.(Gly53Ser)" ""
"0000618980" "00000569" "50" "1610" "0" "1610" "0" "c.1610C>T" "r.(?)" "p.(Pro537Leu)" ""
"0000618981" "00000569" "50" "695" "0" "695" "0" "c.695C>G" "r.(?)" "p.(Pro232Arg)" ""
"0000624410" "00000569" "30" "165" "0" "165" "0" "c.165G>C" "r.(?)" "p.(Lys55Asn)" ""
"0000659074" "00000569" "50" "2669" "0" "2669" "0" "c.2669A>G" "r.(?)" "p.(Lys890Arg)" ""
"0000659075" "00000569" "30" "2559" "0" "2559" "0" "c.2559C>T" "r.(?)" "p.(Leu853=)" ""
"0000701870" "00000569" "50" "79" "0" "79" "0" "c.79G>A" "r.(?)" "p.(Glu27Lys)" ""
"0000728399" "00000569" "50" "2786" "0" "2786" "0" "c.2786G>A" "r.(?)" "p.(Arg929Lys)" ""
"0000728400" "00000569" "50" "2605" "0" "2605" "0" "c.2605A>T" "r.(?)" "p.(Ile869Phe)" ""
"0000728401" "00000569" "50" "1150" "0" "1150" "0" "c.1150G>A" "r.(?)" "p.(Val384Met)" ""
"0000809860" "00000569" "50" "1852" "0" "1852" "0" "c.1852C>T" "r.(?)" "p.(Arg618Cys)" ""
"0000809861" "00000569" "50" "1508" "0" "1508" "0" "c.1508C>T" "r.(?)" "p.(Ser503Leu)" ""
"0000809862" "00000569" "30" "654" "0" "654" "0" "c.654A>G" "r.(?)" "p.(Thr218=)" ""
"0000809863" "00000569" "30" "88" "0" "88" "0" "c.88G>C" "r.(?)" "p.(Gly30Arg)" ""
"0000856330" "00000569" "30" "2904" "0" "2904" "0" "c.2904A>G" "r.(?)" "p.(Arg968=)" ""
"0000856331" "00000569" "30" "437" "0" "437" "0" "c.437A>G" "r.(?)" "p.(His146Arg)" ""
"0000867024" "00000569" "30" "2367" "0" "2367" "0" "c.2367T>C" "r.(?)" "p.(Phe789=)" ""
"0000867025" "00000569" "50" "1430" "0" "1430" "0" "c.1430C>G" "r.(?)" "p.(Thr477Ser)" ""
"0000867026" "00000569" "50" "1430" "0" "1430" "0" "c.1430C>G" "r.(?)" "p.(Thr477Ser)" ""
"0000895917" "00000569" "50" "1574" "0" "1574" "0" "c.1574G>A" "r.(?)" "p.(Arg525His)" ""
"0000895918" "00000569" "30" "643" "0" "643" "0" "c.643A>G" "r.(?)" "p.(Thr215Ala)" ""
"0000915600" "00000569" "50" "1003" "0" "1003" "0" "c.1003C>T" "r.(?)" "p.(Arg335Cys)" ""
"0000927251" "00000569" "50" "3104" "0" "3104" "0" "c.3104G>A" "r.(?)" "p.(Arg1035Lys)" ""
"0000984441" "00000569" "50" "2267" "0" "2267" "0" "c.2267A>G" "r.(?)" "p.(Asn756Ser)" ""
"0000984442" "00000569" "50" "1600" "0" "1600" "0" "c.1600G>A" "r.(?)" "p.(Gly534Arg)" ""
"0001006409" "00000569" "50" "2681" "0" "2681" "0" "c.2681A>T" "r.(?)" "p.(Glu894Val)" ""
"0001006410" "00000569" "50" "2519" "0" "2519" "0" "c.2519C>T" "r.(?)" "p.(Pro840Leu)" ""
"0001006411" "00000569" "10" "19" "0" "19" "0" "c.19G>A" "r.(?)" "p.(Ala7Thr)" ""
"0001006412" "00000569" "30" "8" "0" "8" "0" "c.8A>G" "r.(?)" "p.(Gln3Arg)" ""
"0001015982" "00000569" "50" "47" "0" "47" "0" "c.47A>G" "r.(?)" "p.(Asp16Gly)" ""
## Screenings_To_Variants ## Do not remove or alter this header ##
## Count = 8
"{{screeningid}}" "{{variantid}}"
"0000000209" "0000002144"
"0000000209" "0000003223"
"0000151074" "0000244242"
"0000174247" "0000401296"
"0000174248" "0000401297"
"0000174510" "0000401298"
"0000174522" "0000401299"
"0000319206" "0000701870"