### LOVD-version 3000-30b ### Full data download ### To import, do not remove or alter this header ### ## Filter: (gene_public = TNFRSF10D) # charset = UTF-8 ## Genes ## Do not remove or alter this header ## ## Count = 1 "{{id}}" "{{name}}" "{{chromosome}}" "{{chrom_band}}" "{{imprinting}}" "{{refseq_genomic}}" "{{refseq_UD}}" "{{reference}}" "{{url_homepage}}" "{{url_external}}" "{{allow_download}}" "{{id_hgnc}}" "{{id_entrez}}" "{{id_omim}}" "{{show_hgmd}}" "{{show_genecards}}" "{{show_genetests}}" "{{show_orphanet}}" "{{note_index}}" "{{note_listing}}" "{{refseq}}" "{{refseq_url}}" "{{disclaimer}}" "{{disclaimer_text}}" "{{header}}" "{{header_align}}" "{{footer}}" "{{footer_align}}" "{{created_by}}" "{{created_date}}" "{{edited_by}}" "{{edited_date}}" "{{updated_by}}" "{{updated_date}}" "TNFRSF10D" "tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain" "8" "p21" "unknown" "NG_032579.1" "UD_136018724256" "" "https://www.LOVD.nl/TNFRSF10D" "" "1" "11907" "8793" "603614" "1" "1" "1" "1" "The work leading to the establishment of this LSDB was supported by the European Community\'s Seventh Framework Programme (FP7/2007-2013) under grant agreement no. 200754 - the GEN2PHEN project." "" "g" "https://databases.lovd.nl/shared/refseq/TNFRSF10D_codingDNA.html" "1" "" "
Death Receptor Database (DRdb).
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" "-1" "" "-1" "00001" "2012-04-30 00:00:00" "00085" "2017-10-06 14:54:49" "00001" "2019-12-04 15:26:33" ## Transcripts ## Do not remove or alter this header ## ## Count = 1 "{{id}}" "{{geneid}}" "{{name}}" "{{id_mutalyzer}}" "{{id_ncbi}}" "{{id_ensembl}}" "{{id_protein_ncbi}}" "{{id_protein_ensembl}}" "{{id_protein_uniprot}}" "{{remarks}}" "{{position_c_mrna_start}}" "{{position_c_mrna_end}}" "{{position_c_cds_end}}" "{{position_g_mrna_start}}" "{{position_g_mrna_end}}" "{{created_by}}" "{{created_date}}" "{{edited_by}}" "{{edited_date}}" "00021556" "TNFRSF10D" "tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain" "001" "NM_003840.4" "" "NP_003831.2" "" "" "" "-95" "3443" "1161" "23021543" "22993101" "" "0000-00-00 00:00:00" "" "" ## Diseases ## Do not remove or alter this header ## ## Count = 0 ## Genes_To_Diseases ## Do not remove or alter this header ## ## Count = 0 ## Individuals ## Do not remove or alter this header ## ## Count = 0 ## Individuals_To_Diseases ## Do not remove or alter this header ## ## Count = 0 ## Phenotypes ## Do not remove or alter this header ## ## Count = 0 ## Screenings ## Do not remove or alter this header ## ## Count = 0 ## Screenings_To_Genes ## Do not remove or alter this header ## ## Count = 0 ## Variants_On_Genome ## Do not remove or alter this header ## ## Please note that not necessarily all variants found in the given individuals are shown. This output is restricted to variants in the selected gene. ## Count = 22 "{{id}}" "{{allele}}" "{{effectid}}" "{{chromosome}}" "{{position_g_start}}" "{{position_g_end}}" "{{type}}" "{{average_frequency}}" "{{owned_by}}" "{{VariantOnGenome/DBID}}" "{{VariantOnGenome/DNA}}" "{{VariantOnGenome/Frequency}}" "{{VariantOnGenome/Reference}}" "{{VariantOnGenome/Restriction_site}}" "{{VariantOnGenome/Published_as}}" "{{VariantOnGenome/Remarks}}" "{{VariantOnGenome/Genetic_origin}}" "{{VariantOnGenome/Segregation}}" "{{VariantOnGenome/dbSNP}}" "{{VariantOnGenome/VIP}}" "{{VariantOnGenome/Methylation}}" "{{VariantOnGenome/ISCN}}" "{{VariantOnGenome/DNA/hg38}}" "{{VariantOnGenome/ClinVar}}" "{{VariantOnGenome/ClinicalClassification}}" "{{VariantOnGenome/ClinicalClassification/Method}}" "0000171284" "0" "55" "8" "23021399" "23021399" "subst" "0" "01911" "TNFRSF10D_000019" "g.23021399G>T" "A=1/C=10755" "{EVS:TNFRSF10D}" "" "" "Variant Error [EREF/EREF]: This genomic variant does not match the reference sequence; the transcript variant does not match the reference sequence either. Please fix this entry and then remove this message." "Germline" "" "" "0" "" "" "g.23163886G>T" "" "VUS" "" "0000171285" "0" "55" "8" "22995405" "22995405" "subst" "0" "01911" "TNFRSF10D_000001" "g.22995405C>A" "A=1/C=10757" "{EVS:TNFRSF10D}" "" "" "" "Germline" "" "" "0" "" "" "g.23137892C>A" "" "VUS" "" "0000171286" "0" "55" "8" "23012456" "23012456" "subst" "0" "01911" "TNFRSF10D_000015" "g.23012456G>A" "C=1/T=10757" "{EVS:TNFRSF10D}" "" "" "Variant Error [EREF/EREF]: This genomic variant does not match the reference sequence; the transcript variant does not match the reference sequence either. Please fix this entry and then remove this message." "Germline" "" "" "0" "" "" "g.23154943G>A" "" "VUS" "" "0000171287" "0" "55" "8" "23004546" "23004546" "subst" "0" "01911" "TNFRSF10D_000014" "g.23004546C>T" "G=1/A=10757" "{EVS:TNFRSF10D}" "" "" "Variant Error [EREF/EREF]: This genomic variant does not match the reference sequence; the transcript variant does not match the reference sequence either. Please fix this entry and then remove this message." "Germline" "" "" "0" "" "" "g.23147033C>T" "" "VUS" "" "0000171288" "0" "55" "8" "23004525" "23004525" "subst" "0" "01911" "TNFRSF10D_000013" "g.23004525G>T" "A=2/C=10756" "{EVS:TNFRSF10D}" "" "" "Variant Error [EREF/EREF]: This genomic variant does not match the reference sequence; the transcript variant does not match the reference sequence either. Please fix this entry and then remove this message." "Germline" "" "" "0" "" "" "g.23147012G>T" "" "VUS" "" "0000171289" "0" "55" "8" "23002015" "23002015" "subst" "4.06412E-6" "01911" "TNFRSF10D_000007" "g.23002015G>C" "C=1/G=10757" "{EVS:TNFRSF10D}" "" "" "" "Germline" "" "" "0" "" "" "g.23144502G>C" "" "VUS" "" "0000171290" "0" "55" "8" "22995484" "22995484" "subst" "0" "01911" "TNFRSF10D_000004" "g.22995484G>T" "A=1/C=10757" "{EVS:TNFRSF10D}" "" "" "Variant Error [EREF/EREF]: This genomic variant does not match the reference sequence; the transcript variant does not match the reference sequence either. Please fix this entry and then remove this message." "Germline" "" "" "0" "" "" "g.23137971G>T" "" "VUS" "" "0000171301" "0" "55" "8" "22995390" "22995390" "subst" "4.09913E-6" "01911" "TNFRSF10D_000020" "g.22995390C>T" "" "1000 Genomes 1KG_8_22995390" "" "" "" "Germline" "" "" "0" "" "" "g.23137877C>T" "" "VUS" "" "0000171302" "0" "55" "8" "23012457" "23012457" "subst" "4.08911E-6" "01911" "TNFRSF10D_000021" "g.23012457G>C" "" "1000 Genomes 1KG_8_23012457" "" "" "" "Germline" "" "" "0" "" "" "g.23154944G>C" "" "VUS" "" "0000171303" "0" "55" "8" "23021381" "23021381" "subst" "0" "01911" "TNFRSF10D_000022" "g.23021381C>A" "" "1000 Genomes 1KG_8_23021381" "" "" "" "Germline" "" "" "0" "" "" "g.23163868C>A" "" "VUS" "" "0000171311" "0" "55" "8" "23021346" "23021346" "subst" "0.196543" "01911" "TNFRSF10D_000017" "g.23021346G>A" "T=0.849/C=0.151" "" "" "" "" "Germline" "" "rs11135703" "0" "" "" "g.23163833G>A" "" "VUS" "" "0000171315" "0" "55" "8" "23001988" "23001988" "subst" "0" "01911" "TNFRSF10D_000006" "g.23001988C>T" "G=0.584/A=0.416" "" "" "" "Variant Error [EREF/EREF]: This genomic variant does not match the reference sequence; the transcript variant does not match the reference sequence either. Please fix this entry and then remove this message." "Germline" "" "rs1133782" "0" "" "" "g.23144475C>T" "" "VUS" "" "0000171317" "0" "55" "8" "23003364" "23003364" "subst" "0" "01911" "TNFRSF10D_000011" "g.23003364G>T" "C=0.997/A=0.003" "" "" "" "Variant Error [EREF/EREF]: This genomic variant does not match the reference sequence; the transcript variant does not match the reference sequence either. Please fix this entry and then remove this message." "Germline" "" "rs114914813" "0" "" "" "g.23145851G>T" "" "VUS" "" "0000171319" "0" "55" "8" "23002045" "23002045" "subst" "0" "01911" "TNFRSF10D_000008" "g.23002045C>G" "G=0.989/C=0.011" "" "" "" "Variant Error [EREF/EREF]: This genomic variant does not match the reference sequence; the transcript variant does not match the reference sequence either. Please fix this entry and then remove this message." "Germline" "" "rs116710124" "0" "" "" "g.23144532C>G" "" "VUS" "" "0000171331" "0" "55" "8" "23012480" "23012480" "subst" "0" "01911" "TNFRSF10D_000016" "g.23012480T>C" "" "" "" "" "Variant Error [EREF/EREF]: This genomic variant does not match the reference sequence; the transcript variant does not match the reference sequence either. Please fix this entry and then remove this message." "Germline" "" "rs143066323" "0" "" "" "g.23154967T>C" "" "VUS" "" "0000171338" "0" "55" "8" "22995462" "22995462" "subst" "0" "01911" "TNFRSF10D_000003" "g.22995462T>C" "" "" "" "" "Variant Error [EREF/EREF]: This genomic variant does not match the reference sequence; the transcript variant does not match the reference sequence either. Please fix this entry and then remove this message." "Germline" "" "rs146406246" "0" "" "" "g.23137949T>C" "" "VUS" "" "0000171342" "0" "55" "8" "22995436" "22995436" "subst" "0" "01911" "TNFRSF10D_000002" "g.22995436G>A" "" "" "" "" "Variant Error [EREF/EREF]: This genomic variant does not match the reference sequence; the transcript variant does not match the reference sequence either. Please fix this entry and then remove this message." "Germline" "" "rs148603893" "0" "" "" "g.23137923G>A" "" "VUS" "" "0000171343" "0" "55" "8" "23004486" "23004486" "subst" "0" "01911" "TNFRSF10D_000012" "g.23004486C>T" "G=0.999/A=0.001" "" "" "" "Variant Error [EREF/EREF]: This genomic variant does not match the reference sequence; the transcript variant does not match the reference sequence either. Please fix this entry and then remove this message." "Germline" "" "rs149074636" "0" "" "" "g.23146973C>T" "" "VUS" "" "0000171349" "0" "55" "8" "22995511" "22995511" "subst" "0.00620891" "01911" "TNFRSF10D_000005" "g.22995511T>G" "A=0.964/C=0.036" "" "" "" "" "Germline" "" "rs34622674" "0" "" "" "g.23137998T>G" "" "VUS" "" "0000171351" "0" "55" "8" "23003321" "23003321" "subst" "0.00159988" "01911" "TNFRSF10D_000010" "g.23003321A>G" "T=0.986/C=0.014" "" "" "" "" "Germline" "" "rs34866525" "0" "" "" "g.23145808A>G" "" "VUS" "" "0000171352" "0" "55" "8" "23003292" "23003292" "subst" "0" "01911" "TNFRSF10D_000009" "g.23003292C>A" "C=0.984/T=0.016" "" "" "" "Variant Error [EREF/EREF]: This genomic variant does not match the reference sequence; the transcript variant does not match the reference sequence either. Please fix this entry and then remove this message." "Germline" "" "rs35213435" "0" "" "" "g.23145779C>A" "" "VUS" "" "0000171358" "0" "55" "8" "23021397" "23021397" "subst" "0" "01911" "TNFRSF10D_000018" "g.23021397C>T" "" "" "" "" "Variant Error [EREF/EREF]: This genomic variant does not match the reference sequence; the transcript variant does not match the reference sequence either. Please fix this entry and then remove this message." "Germline" "" "rs73671020" "0" "" "" "g.23163884C>T" "" "VUS" "" ## Variants_On_Transcripts ## Do not remove or alter this header ## ## Please note that not necessarily all variants found in the given individuals are shown. This output is restricted to variants in the selected gene. ## Note: Only showing Variants_On_Transcript columns active for Genes TNFRSF10D ## Count = 22 "{{id}}" "{{transcriptid}}" "{{effectid}}" "{{position_c_start}}" "{{position_c_start_intron}}" "{{position_c_end}}" "{{position_c_end_intron}}" "{{VariantOnTranscript/DNA}}" "{{VariantOnTranscript/RNA}}" "{{VariantOnTranscript/Protein}}" "{{VariantOnTranscript/Exon}}" "{{VariantOnTranscript/Predict/BioInf}}" "0000171284" "00021556" "55" "50" "0" "50" "0" "c.50C>A" "r.(?)" "p.(Gly17Val)" "1" "PolyPhen: probably damaging" "0000171285" "00021556" "55" "1139" "0" "1139" "0" "c.1139G>T" "r.(?)" "p.(Gly380Val)" "9" "PolyPhen: probably damaging" "0000171286" "00021556" "55" "187" "0" "187" "0" "c.187C>T" "r.(?)" "p.(Glu63Lys)" "2" "PolyPhen: probably damaging" "0000171287" "00021556" "55" "410" "0" "410" "0" "c.410G>A" "r.(?)" "p.(Thr137Ile)" "4" "PolyPhen: probably damaging" "0000171288" "00021556" "55" "431" "0" "431" "0" "c.431C>A" "r.(?)" "p.(Gly144Val)" "4" "PolyPhen: probably damaging" "0000171289" "00021556" "55" "902" "0" "902" "0" "c.902C>G" "r.(?)" "p.(Ala301Gly)" "7" "PolyPhen: probably damaging" "0000171290" "00021556" "55" "1060" "0" "1060" "0" "c.1060C>A" "r.(?)" "p.(Glu354*)" "9" "" "0000171301" "00021556" "55" "1154" "0" "1154" "0" "c.1154G>A" "r.(?)" "p.(Cys385Tyr)" "9" "PolyPhen: possibly damaging" "0000171302" "00021556" "55" "186" "0" "186" "0" "c.186C>G" "r.(?)" "p.(Asp62Glu)" "2" "PolyPhen: possibly damaging" "0000171303" "00021556" "55" "68" "0" "68" "0" "c.68G>T" "r.(?)" "p.(Arg23Met)" "1" "PolyPhen: probably damaging" "0000171311" "00021556" "55" "103" "0" "103" "0" "c.103C>T" "r.(?)" "p.(Pro35Ser)" "1" "PolyPhen: possibly damaging" "0000171315" "00021556" "55" "929" "0" "929" "0" "c.929G>A" "r.(?)" "p.(Leu310Ser)" "7" "PolyPhen: probably damaging" "0000171317" "00021556" "55" "553" "0" "553" "0" "c.553C>A" "r.(?)" "p.(Ala185Ser)" "5" "PolyPhen: possibly damaging" "0000171319" "00021556" "55" "872" "0" "872" "0" "c.872G>C" "r.(?)" "p.(Ser291Cys)" "7" "PolyPhen: probably damaging" "0000171331" "00021556" "55" "163" "0" "163" "0" "c.163A>G" "r.(?)" "p.(Ser55Pro)" "2" "PolyPhen: probably damaging" "0000171338" "00021556" "55" "1082" "0" "1082" "0" "c.1082A>G" "r.(?)" "p.(Thr361Ile)" "9" "PolyPhen: probably damaging" "0000171342" "00021556" "55" "1108" "0" "1108" "0" "c.1108C>T" "r.(?)" "p.(Glu370Lys)" "9" "PolyPhen: possibly damaging" "0000171343" "00021556" "55" "470" "0" "470" "0" "c.470G>A" "r.(?)" "p.(Thr157Met)" "4" "PolyPhen: possibly damaging" "0000171349" "00021556" "55" "1033" "0" "1033" "0" "c.1033A>C" "r.(?)" "p.(Thr345Pro)" "9" "PolyPhen: probably damaging" "0000171351" "00021556" "55" "596" "0" "596" "0" "c.596T>C" "r.(?)" "p.(Val199Ala)" "5" "PolyPhen: probably damaging" "0000171352" "00021556" "55" "625" "0" "625" "0" "c.625G>T" "r.(?)" "p.(Pro209Thr)" "5" "PolyPhen: possibly damaging" "0000171358" "00021556" "55" "52" "0" "52" "0" "c.52G>A" "r.(?)" "p.(Arg18Cys)" "1" "PolyPhen: probably damaging" ## Screenings_To_Variants ## Do not remove or alter this header ## ## Count = 0