Individual #00000001

ID_report -
Reference PubMed: Bell 2011
Remarks -
Gender -
Consanguinity -
Country -
Population -
Age at death -
VIP -
Data_av -
Treatment -
Panel size 1
Diseases ?, JBS
Owner name Global Variome, with Curator vacancy


Stop! No phenotypes found for this individual!



Screenings


AscendingScreening ID     

Template     

Technique     

Tissue     

Remarks     

Genes screened     

Variants found     

Owner     
0000000001 DNA SEQ-NG - - ACADM, ADA, ARSB, ATP7B, CYP21A2, DMD, ETFB, GALT, GLB1, IGHMBP2, LAMA2, NHLRC1, NPHP3, NPHS1, RAD51B, SLC26A2 34 Global Variome, with Curator vacancy



Variants

34 entries on 1 page. Showing entries 1 - 34.
Legend  

Chr     

Allele     

Effect     

Classification method     

Clinical classification     

AscendingDNA change (genomic) (hg19)     

DNA change (hg38)     

Published as     

ISCN     

DB-ID     

Variant remarks     

Reference     

ClinVar ID     

dbSNP ID     

Origin     

Segregation     

Frequency     

Re-site     

VIP     

Methylation     

Owner     

Gene     

Codon change     

IDbase Accession Number     

VariO/DNA     

VariO/Protein     

VariO/RNA     

Exon     

DNA change (cDNA)     

Haplotype     

RNA change     

Protein     

P-domain     

Exon_old     

DNA/Legacy     

Function/GVS     

Predict/AGVGD     

Predict/Grantham     

Predict/MutationTaster     

Predict/PolyPhen     

Predict/PolyPhenScore     

Predict/SIFT     

Predicted     

Type/DNA     

Conservation     

CpG     

Enzyme activity     

mRNA level     

Predict/CADD     

Predict/Splice     

Legacy protein change     

Protein level     
1 Unknown ?/. - VUS g.76199277A>C g.75733592A>C - - ACADM_000001 - - - - Germline - - - - - Gerard C.P. Schaafsma ACADM - - - - - - NM_000016.4:c.351A>C - r.(=) p.(=) - - - - - - - - - - - - - - - - - - - -
3 Unknown ?/. - VUS g.33138549G>A g.33097057G>A - - GLB1_000061 - - - - Germline - - - 0 - Gerard C.P. Schaafsma GLB1, TMPPE - - - - - - NM_000404.2:c.29C>T, NM_001039770.2:c.-447C>T - r.(?), r.(=) p.(Pro10Leu), p.(=) - - - - - - - - - - - - - - - - - - - -
3 Unknown ?/. - VUS g.132401603G>C g.132682759G>C - - NPHP3_000003 - - - - Germline - - - 0 - Gerard C.P. Schaafsma NPHP3, NPHP3-ACAD11 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
5 Unknown ?/. - VUS g.78135241C>T g.78839418C>T - - ARSB_000001 - - - - Germline - - - - - Gerard C.P. Schaafsma ARSB - - - - - - NM_000046.3:c.1151G>A - r.(?) p.(Ser384Asn) - - - - - - - - - - - - - - - - - - - -
5 Unknown ?/? - VUS g.131705458G>C - c.-207G>C - SLC22A5_000045 Variant Error [EREF/ESYNTAX]: This genomic variant does not match the reference sequence; the transcript variant also has an error. Please fix this entry and then remove this message. {dbSNP2631367} - - Unknown - - - 0 - - SLC22A5 - - - - - 1 NM_003060.3:c.-207C - r.(?) p.(=) - - - - - - - - - - - - - - - - - - - -
5 Unknown ?/? - VUS g.131705676C>G g.132369984C>G - - SLC22A5_000025 - {dbSNP72552722} - - Unknown - - - 0 - - SLC22A5 - - - - - 1 NM_003060.3:c.12C>G - r.(?) p.(Tyr4*) - - - - - - - - - - - - - - - - - - - -
5 Unknown ?/? - VUS g.131705715C>G g.132370023C>G - - SLC22A5_000082 - {dbSNP11568520} - - Unknown - - - 0 - - SLC22A5 - - - - - 1 NM_003060.3:c.51C>G - r.(?) p.(Phe17Leu) - - - - - - - - - - - - - - - - - - - -
5 Unknown ?/? - VUS g.131705720G>C g.132370028G>C - - SLC22A5_000027 - {dbSNP72552723} - - Unknown - - - 0 - - SLC22A5 - - - - - 1 NM_003060.3:c.56G>C - r.(?) p.(Arg19Pro) - - - - - - - - - - - - - - - - - - - -
5 Unknown ?/? - VUS g.131705747G>T g.132370055G>T - - SLC22A5_000042 - {dbSNP72552724} - - Unknown - - - 0 - - SLC22A5 - - - - - 1 NM_003060.3:c.83G>T - r.(?) p.(Ser28Ile) - - - - - - - - - - - - - - - - - - - -
5 Unknown ?/? - VUS g.131705759A>G g.132370067A>G - - SLC22A5_000040 - {dbSNP72552725} - - Unknown - - - 0 - - SLC22A5 - - - - - 1 NM_003060.3:c.95A>G - r.(?) p.(Asn32Ser) - - - - - - - - - - - - - - - - - - - -
5 Unknown ?/? - VUS g.131705912G>T g.132370220G>T - - SLC22A5_000047 - {dbSNP72552726} - - Unknown - - - 0 - - SLC22A5 - - - - - 1 NM_003060.3:c.248G>T - r.(?) p.(Arg83Leu) - - - - - - - - - - - - - - - - - - - -
5 Unknown ?/? - VUS g.131714072G>A g.132378380G>A - - SLC22A5_000004 - {dbSNP72552727} - - Unknown - - - 0 - - SLC22A5 - - - - - 2 NM_003060.3:c.396G>A - r.(?) p.(Trp132*) - - - - - - - - - - - - - - - - - - - -
5 Unknown ?/? - VUS g.131721092G>T g.132385400G>T - - SLC22A5_000022 - {dbSNP72552728} - - Unknown - - - 0 - - SLC22A5 - - - - - 4 NM_003060.3:c.725G>T - r.(?) p.(Gly242Val) - - - - - - - - - - - - - - - - - - - -
5 Unknown ?/? - VUS g.131722739T>C g.132387047T>C - - SLC22A5_000018 - {dbSNP72552729} - - Unknown - - - 0 - - SLC22A5 - - - - - 5 NM_003060.3:c.847T>C - r.(?) p.(Trp283Arg) - - - - - - - - - - - - - - - - - - - -
5 Unknown ?/? - VUS g.131722794C>A g.132387102C>A - - SLC22A5_000023 - {dbSNP72552730} - - Unknown - - - 0 - - SLC22A5 - - - - - 5 NM_003060.3:c.902C>A - r.(?) p.(Ala301Asp) - - - - - - - - - - - - - - - - - - - -
5 Unknown ?/? - VUS g.131724712T>C g.132389020T>C - - SLC22A5_000020 - {dbSNP68018207} - - Unknown - - - 0 - - SLC22A5 - - - - - 6 NM_003060.3:c.1051T>C - r.(?) p.(Trp351Arg) - - - - - - - - - - - - - - - - - - - -
5 Unknown ?/? - VUS g.131726490T>G g.132390798T>G - - SLC22A5_000028 - {dbSNP72552731} - - Unknown - - - 0 - - SLC22A5 - - - - - 7 NM_003060.3:c.1161T>G - r.(?) p.(Tyr387*) - - - - - - - - - - - - - - - - - - - -
5 Unknown ?/? - VUS g.131728176C>T g.132392484C>T - - SLC22A5_000034 - {dbSNP72552732} - - Unknown - - - 0 - - SLC22A5 - - - - - 8 NM_003060.3:c.1319C>T - r.(?) p.(Thr440Met) - - - - - - - - - - - - - - - - - - - -
5 Unknown ?/? - VUS g.131728193G>T g.132392501G>T - - SLC22A5_000002 - {dbSNP72552733} - - Unknown - - - 0 - - SLC22A5 - - - - - 8 NM_003060.3:c.1336G>T - r.(?) p.(Val446Phe) - - - - - - - - - - - - - - - - - - - -
5 Unknown ?/? - VUS g.131728202T>G g.132392510T>G - - SLC22A5_000044 - {dbSNP11568514} - - Unknown - - - 0 - - SLC22A5 - - - - - 8 NM_003060.3:c.1345T>G - r.(?) p.(Tyr449Asp) - - - - - - - - - - - - - - - - - - - -
5 Unknown ?/? - VUS g.131728211G>A g.132392519G>A - - SLC22A5_000019 - {dbSNP72552734} - - Unknown - - - 0 - - SLC22A5 - - - - - 8 NM_003060.3:c.1354G>A - r.(?) p.(Glu452Lys) - - - - - - - - - - - - - - - - - - - -
5 Unknown ?/? - VUS g.131728257C>G g.132392565C>G - - SLC22A5_000015 - {dbSNP60376624} - - Unknown - - - 0 - - SLC22A5 - - - - - 8 NM_003060.3:c.1400C>G - r.(?) p.(Ser467Cys) - - - - - - - - - - - - - - - - - - - -
5 Unknown ?/? - VUS g.131728290C>T g.132392598C>T - - SLC22A5_000011 - {dbSNP72552735} - - Unknown - - - 0 - - SLC22A5 - - - - - 8 NM_003060.3:c.1433C>T - r.(?) p.(Pro478Leu) - - - - - - - - - - - - - - - - - - - -
5 Unknown ?/? - VUS g.131728298G>T g.132392606G>T - - SLC22A5_000058 - {dbSNP11568513} - - Unknown - - - 0 - - SLC22A5 - - - - - 9 NM_003060.3:c.1441G>T - r.(?) p.(Val481Phe) - - - - - - - - - - - - - - - - - - - -
5 Unknown ?/? - VUS g.131729380G>A g.132393688G>A - - SLC22A5_000053 - {dbSNP28383481} - - Unknown - - - 0 - - SLC22A5 - - - - - 9 NM_003060.3:c.1463G>A - r.(?) p.(Arg488His) - - - - - - - - - - - - - - - - - - - -
5 Both (homozygous) ?/. - VUS g.149361221A>T g.149981658A>T - - SLC26A2_000001 - - - - Germline - - - 0 - Gerard C.P. Schaafsma SLC26A2 - - - - - 3 NM_000112.3:c.2065A>T - r.(?) p.(Thr689Ser) - - - - - - - - - - - - - - - - - - - -
6 Unknown ?/. - VUS g.18122506G>A g.18122275G>A - - NHLRC1_000001 - - - - Germline - - - - - Gerard C.P. Schaafsma NHLRC1 - - - - - - NM_198586.2:c.332C>T - r.(?) p.(Pro111Leu) - - - - - - - - - - - - - - - - - - - -
6 Unknown ?/. - VUS g.32006387A>T g.32038610A>T - - CYP21A2_000002 - - - - Germline - - - - - Gerard C.P. Schaafsma CYP21A2 - - - - - 1 NM_000500.7:c.188A>T - r.(?) p.(His63Leu) - - - - - - - - - - - - - - - - - - - -
9 Both (homozygous) ?/. - VUS g.34647528G>C g.34647531G>C - - GALT_000001 - - - - Germline - - - - - Gerard C.P. Schaafsma GALT - - - - - - NM_000155.3:c.292G>C - r.(?) p.(Asp98His) - - - - - - - - - - - - - - - - - - - -
11 Unknown ?/. - VUS g.68705674C>A g.68938206C>A - - IGHMBP2_000003 - - - - Germline - - - 0 - Gerard C.P. Schaafsma IGHMBP2 - - - - - 14 NM_002180.2:c.2636C>A - r.(?) p.(Thr879Lys) - - - - - - - - - - - - - - - - - - - -
13 Both (homozygous) ?/. - VUS g.52515354A>G g.51941218A>G - - ATP7B_000001 - - - - Germline - - - - - Gerard C.P. Schaafsma ATP7B - - - - - - NM_000053.3:c.3419T>C - r.(?) p.(Val1140Ala) - - - - - - - - - - - - - - - - - - - -
19 Unknown ?/. - VUS g.36342212C>T g.35851310C>T - - NPHS1_000001 - - - - Germline - - - - - Gerard C.P. Schaafsma NPHS1 - - - - - - NM_004646.3:c.349G>A - r.(?) p.(Glu117Lys) - - - - - - - - - - - - - - - - - - - -
19 Unknown ?/. - VUS g.51850290G>A g.51347036G>A - - ETFB_000001 - - - - Germline - - - - - Gerard C.P. Schaafsma ETFB - - - - - - NM_001014763.1:c.734C>T, NM_001985.2:c.461C>T - r.(?) p.(Thr245Met), p.(Thr154Met) - - - - - - - - - - - - - - - - - - - -
20 Unknown ?/. - VUS g.43255220T>C g.44626579T>C - - ADA_000030 - - - - Germline - - - - - Gerard C.P. Schaafsma ADA - - - - - - NM_000022.2:c.239A>G - r.(?) p.(Lys80Arg) - - - - - - - - - - - - - - - - - - - -
Legend