Individual #00000076

ID_report -
Reference PubMed: Bell 2011
Remarks -
Gender -
Consanguinity -
Country -
Population -
Age/Death -
VIP -
Data_av -
Treatment -
Panel size 1
Diseases -
Owner name LOVD-team, but with Curator vacancy


Stop! No phenotypes found for this individual!



Screenings


AscendingScreening ID     

Template     

Technique     

Tissue     

Remarks     

Genes screened     

Variants found     

Owner     
0000000076 DNA SEQ-NG - - ATP7B, BCKDHA, FKRP, GAA, GLB1, HSD17B4, IGHMBP2, MEFV, NHLRC1, NPHS1, PMM2, POMGNT1, PPT1, SERPINA1, SLC26A2 17 LOVD-team, but with Curator vacancy



Variants

17 entries on 1 page. Showing entries 1 - 17.
Legend  

Chr     

Allele     

AscendingDNA change (genomic) (hg19)     

DNA change (hg38)     

Published as     

ISCN     

DB-ID     

Variant remarks     

Reference     

ClinVar ID     

dbSNP ID     

Origin     

Segregation     

Frequency     

Re-site     

VIP     

Methylation     

Owner     

Gene     

Effect     

Codon change     

IDbase Accession Number     

VariO/DNA     

VariO/Protein     

VariO/RNA     

Exon     

DNA change (cDNA)     

Haplotype     

ClassClinical     

RNA change     

Protein     

P-domain     

Exon_old     

DNA/Legacy     

Function/GVS     

Protein/Legacy     

CodonNr     

Method     

Predict/AGVGD     

Predict/Grantham     

Predict/MutationTaster     

Predict/PolyPhen     

Predict/PolyPhenScore     

Predict/SIFT     

Predicted     

Type/DNA     

Conservation     

CpG     

Enzyme activity     

mRNA level     

Predict/CADD     

Predict/Splice     

Protein/Stain     

Protein level     
1 Unknown g.40557070T>A g.40091398T>A - - PPT1_000001 - - - - Germline - - - - - Gerard C.P. Schaafsma PPT1 ?/. - - - - - - NM_000310.3:c.364A>T - - r.(?) p.(Arg122Trp) - - - - - - - - - - - - - - - - - - - - - - -
1 Unknown g.40558179C>T g.40092507C>T - - PPT1_000002 - - - - Germline - - - - - Gerard C.P. Schaafsma PPT1 ?/. - - - - - - NM_000310.3:c.125G>A - - r.(?) p.(Gly42Glu) - - - - - - - - - - - - - - - - - - - - - - -
1 Unknown g.46655645C>T g.46189973C>T - - POMGNT1_000035 - - - - Germline - - - - - Gerard C.P. Schaafsma POMGNT1 ./. - - - - - - NM_001243766.1:c.1666G>A - - r.(?) p.(Asp556Asn) - - - - - - - - - - - - - - - - - - - - - - -
3 Unknown g.33138549G>A g.33097057G>A - - GLB1_000061 - - - - Germline - - - 0 - Gerard C.P. Schaafsma GLB1, TMPPE ./. - - - - - - NM_000404.2:c.29C>T, NM_001039770.2:c.-447C>T - - r.(?), r.(=) p.(Pro10Leu), p.(=) - - - - - - - - - - - - - - - - - - - - - - -
5 Unknown g.118829596A>T g.119493901A>T - - HSD17B4_000001 - - - - Unknown - - - 0 - Gerard C.P. Schaafsma HSD17B4 ?/. - - - - - 11 NM_000414.3:c.823A>T - - r.(?) p.(Lys275*) - - - - - - - - - - - - - - - - - - - - - - -
5 Unknown g.149361221A>T g.149981658A>T - - SLC26A2_000001 - - - - Germline - - - 0 - Gerard C.P. Schaafsma SLC26A2 ?/. - - - - - 3 NM_000112.3:c.2065A>T - - r.(?) p.(Thr689Ser) - - - - - - - - - - - - - - - - - - - - - - -
6 Unknown g.18122506G>A g.18122275G>A - - NHLRC1_000001 - - - - Germline - - - - - Gerard C.P. Schaafsma NHLRC1 ?/. - - - - - - NM_198586.2:c.332C>T - - r.(?) p.(Pro111Leu) - - - - - - - - - - - - - - - - - - - - - - -
11 Unknown g.68705674C>A g.68938206C>A - - IGHMBP2_000003 - - - - Germline - - - 0 - Gerard C.P. Schaafsma IGHMBP2 ?/. - - - - - 14 NM_002180.2:c.2636C>A - - r.(?) p.(Thr879Lys) - - - - - - - - - - - - - - - - - - - - - - -
13 Both (homozygous) g.52515354A>G g.51941218A>G - - ATP7B_000001 - - - - Germline - - - - - Gerard C.P. Schaafsma ATP7B ./. - - - - - - NM_000053.3:c.3419T>C - - r.(?) p.(Val1140Ala) - - - - - - - - - - - - - - - - - - - - - - -
14 Unknown g.94847415A>G g.94381078A>G - - SERPINA1_000002 - - - - Germline - - - - - Gerard C.P. Schaafsma SERPINA1 ?/. - - - - - - NM_001127701.1:c.710T>C - - r.(?) p.(Val237Ala) - - - - - - - - - - - - - - - - - - - - - - -
16 Unknown g.3304463C>T g.3254463C>T - - MEFV_000001 - - - - Unknown - - - 0 - Gerard C.P. Schaafsma MEFV ?/. - - - - - 2 NM_000243.2:c.605G>A - - r.(?) p.(Arg202Gln) - - - - - - - - - - - - - - - - - - - - - - -
16 Unknown g.8906914A>C g.8813057A>C - - PMM2_000049 - PubMed: Bell 2011 - - Germline - - - 0 - Gerard C.P. Schaafsma PMM2 ?/. - - - - - 7 NM_000303.2:c.590A>C - - r.(?) p.(Glu197Ala) - - - - - - - - - - - - - - - - - - - - - - -
17 Unknown g.78078910del g.80105111del - - GAA_000028 - - - - Germline - - - - - Gerard C.P. Schaafsma GAA ?/. - - - - - 2 NM_000152.3:c.525del - VUS r.(?) p.(Glu176Argfs*45) - - - - - - - - - - - - - - - - - - - - - - -
19 Unknown g.36322601T>C g.35831699T>C - - NPHS1_000002 - - - - Germline - - - - - Gerard C.P. Schaafsma NPHS1 ?/. - - - - - - NM_004646.3:c.3230A>G - - r.(?) p.(Asn1077Ser) - - - - - - - - - - - - - - - - - - - - - - -
19 Unknown g.36342212C>T g.35851310C>T - - NPHS1_000001 - - - - Germline - - - - - Gerard C.P. Schaafsma NPHS1 ?/. - - - - - - NM_004646.3:c.349G>A - - r.(?) p.(Glu117Lys) - - - - - - - - - - - - - - - - - - - - - - -
19 Unknown g.41920030C>T g.41414125C>T - - BCKDHA_000002 - - - - Germline - - - - - Gerard C.P. Schaafsma BCKDHA ?/. - - - - - - NM_000709.3:c.452C>T - - r.(?) p.(Thr151Met) - - - - - - - - - - - - - - - - - - - - - - -
19 Unknown g.47259048C>G g.46755791C>G - - FKRP_000016 - - - - Germline - - - 0 - Gerard C.P. Schaafsma FKRP ?/. - - - - - 4 NM_024301.4:c.341C>G - VUS r.(?) p.(Ala114Gly) - - - - - - - - - - - - - - - - - - - - - - -
Legend