Individual #00002047

ID_report -
Reference -
Remarks brother of A194
Gender M
Consanguinity ?
Country Poland
Population white
Age at death -
VIP -
Data_av -
Treatment -
Panel size 1
Diseases SLOS
Parent(s) Father, Mother
Owner name Division of Human Genetics, Innsbruck
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by Johan den Dunnen


Phenotypes

Smith-Lemli-Opitz syndrome (SLOS) (SLOS)   Add phenotype for this disease

AscendingPhenotype ID     

Diagnosis/Initial     

Inheritance     

Diagnosis/Definite     

Age/Examination     

Age/Onset     

Phenotype/Onset     

Phenotype details     

Biochem     

Protein     

Age/Diagnosis     

Severity_score     

Owner     
0000001026 - Familial - - - - ascertainment clinical presentation cholesterol: 1496 ug/ml, 7DHC: 196 ug/ml, 8DHC: 189 ug/ml - - 11 Division of Human Genetics, Innsbruck



Screenings


AscendingScreening ID     

Template     

Technique     

Tissue     

Remarks     

Genes screened     

Variants found     

Owner     
0000001725 DNA SEQ - - DHCR7 2 Division of Human Genetics, Innsbruck
0000002221 DNA SEQ - - APOE 1 Division of Human Genetics, Innsbruck



Variants

3 entries on 1 page. Showing entries 1 - 3.
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Chr     

Allele     

Effect     

Classification method     

Clinical classification     

AscendingDNA change (genomic) (hg19)     

DNA change (hg38)     

Published as     

ISCN     

DB-ID     

Variant remarks     

Reference     

ClinVar ID     

dbSNP ID     

Origin     

Segregation     

Frequency     

Re-site     

VIP     

Methylation     

Owner     

Gene     

Codon change     

IDbase Accession Number     

VariO/DNA     

VariO/Protein     

VariO/RNA     

Exon     

DNA change (cDNA)     

Haplotype     

RNA change     

Protein     

P-domain     

Exon_old     

Function/GVS     

Predict/AGVGD     

Predict/Grantham     

Predict/MutationTaster     

Predict/PolyPhen     

Predict/PolyPhenScore     

Predict/SIFT     

Predicted     

Type/DNA     

Conservation     

CpG     

Enzyme activity     

mRNA level     

Predict/CADD     

Predict/Splice     

Legacy protein change     

Protein level     
11 Unknown +/+ - pathogenic g.71146873C>A g.71435827C>A - - DHCR7_000006 - PubMed: Fitzky et al. 1998 - rs80338859 Unknown - - - 0 - Division of Human Genetics, Innsbruck DHCR7 - - - - - 9 NM_001360.2:c.976G>T - r.(?) p.(Val326Leu) - - - - - - - - - - - - - - - - - - -
11 Maternal (confirmed) +?/+? - likely pathogenic g.71155157A>G g.71444111A>G - - DHCR7_000151 - PubMed: Ciara et al. 2004 - - Unknown - - - 0 - Division of Human Genetics, Innsbruck DHCR7 - - - - - 4 NM_001360.2:c.203T>C - r.(?) p.(Leu68Pro) - - - - - - - - - - - - - - - - - - -
19 Parent #1 ?/? - VUS g.45412079C>T g.44908822C>T apoE2 - APOE_000002 - PubMed: Fitzky et al. 1998 - - Germline no - - 0 - Division of Human Genetics, Innsbruck APOE - - - - - 4 NM_000041.2:c.526C>T E2 r.(?) p.(Arg176Cys) - - - - - - - - - - - - - - - - - - -
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