Individual #00058918

ID_report -
Reference Carrera et al., submitted
Remarks large 4-generation family
Gender F
Consanguinity yes
Country Italy
Population white
Age at death -
VIP -
Data_av contributing lab 4
Treatment -
Panel size 1
Diseases PKD
Owner name Paola Carrera
Database submission license No license selected
Created by Paola Carrera
Date created 2016-01-10 14:30:07 +01:00 (CET)
Date last edited 2022-01-21 16:45:37 +01:00 (CET)


Phenotypes

kidney disease, polycystic (PKD) (PKD)   Add phenotype for this disease

AscendingPhenotype ID     

Phenotype details     

Diagnosis/Initial     

Diagnosis/Definite     

Inheritance     

Age/Examination     

Age/Diagnosis     

Age/Onset     

Phenotype/Onset     

Protein     

Cysts     

Hypertension     

Owner     
0000045506 renal cysts (HP:0000107); hepatic cysts (HP:0001407) - - Familial, autosomal dominant - - - affected - renal;hepatic - Paola Carrera



Screenings


AscendingScreening ID     

Template     

Technique     

Tissue     

Remarks     

Genes screened     

Variants found     

Owner     
0000058881 DNA SEQ blood - PKD1 4 Paola Carrera



Variants

4 entries on 1 page. Showing entries 1 - 4.
Legend   How to query  

Chr     

Allele     

Effect     

Classification method     

Clinical classification     

AscendingDNA change (genomic) (hg19)     

DNA change (hg38)     

Published as     

ISCN     

DB-ID     

Variant remarks     

Reference     

ClinVar ID     

dbSNP ID     

Origin     

Segregation     

Frequency     

Re-site     

VIP     

Methylation     

Owner     

Gene     

IDbase Accession Number     

VariO/DNA     

VariO/Protein     

VariO/RNA     

Exon     

DNA change (cDNA)     

Haplotype     

RNA change     

Protein     

P-domain     

Exon_old     

Function/GVS     

Predict/AGVGD     

Predict/MutationTaster     

Predict/SIFT     

Predicted     

Type/DNA     

CpG     

Enzyme activity     

mRNA level     

Predict-BioInf     

Legacy protein change     

Protein level     
4 Paternal (inferred) +/+ - pathogenic g.88967950_88967951del g.88046798_88046799del - - PKD2_000144 - - - - Germline - - - - - Paola Carrera PKD2 - - - - 6 NM_000297.3:c.1476_1477del - r.(?) p.(Leu493Glyfs*32) - - - - - - - - - - - - - -
16 Unknown ?/. - VUS g.2158843T>C g.2108842T>C - - PKD1_000637 - - - - Germline - - - - - Paola Carrera PKD1 - - - - 15 NM_001009944.2:c.6325A>G - r.(?) p(Arg2109Gly) - - - - - - - - - - - PolyPhen: benign; SIFT: Tolerated; MutationTaster: polymorphism; Grantham: 125; AGVGD: C0 - -
16 Unknown -?/. - likely benign g.2168022C>A g.2118021C>A - - PKD1_000054 - - - rs199476099 Germline - - - - - Paola Carrera PKD1 - - - - 5 NM_001009944.2:c.971G>T - r.(?) p.(Arg324Leu) - - - - - - - - - - - PolyPhen: possibly damaging; SIFT: Tolerated; MutationTaster: disease causing; Grantham: 102; AGVGD: C0 - -
16 Unknown ?/. - VUS g.2169327G>A g.2119326G>A - - PKD1_000704 - - - - Germline - - - - - Paola Carrera PKD1 - - - - 2 NM_001009944.2:c.268C>T - r.(?) p.(Leu90Phe) - - - - - - - - - - - PolyPhen: benign; SIFT: damaging; MutationTaster: polymorphism; Grantham: 22; AGVGD: C0 - -
Legend   How to query  


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