Individual #00091816

ID_report 2
Reference PubMed: Chen XF 2016
Remarks -
Gender M
Consanguinity -
Country China
Population -
Age/Death -
VIP 0
Data_av -
Treatment -
Panel size 1
Diseases XLA
Owner name Qing Wang


Phenotypes

agammaglobulinemia, X-linked (XLA, agammaglobulinemia, X-linked, type 1 (AGMX-1)) (XLA;AGMX-1)   Add phenotype for this disease

AscendingPhenotype ID     

Diagnosis/Initial     

Kinase activity     

Diagnosis/Definite     

IgA (g/l)     

IgE (g/l)     

IgG (g/l)     

IgG1 (g/l)     

IgG2 (g/l)     

IgG3 (g/l)     

IgG4 (g/l)     

IgM (g/l)     

Phenotype details     

Inheritance     

Age/Examination     

Age/Diagnosis     

Age/Onset     

Phenotype/Onset     

B cells (%)     

B cells surf Ig (%)     

CD3     

CD4     

CD8     

CD19     

CD20     

Protein     

Owner     
0000070143 - - - 0.0001 - 0.015 - - - - 0.002 Symptoms: pneumonia, otitis media, persisting diarrhea, skin infection, arthritis Unknown - 03y06m 00y10m - 0.2 - - - - - - - Qing Wang



Screenings


AscendingScreening ID     

Template     

Technique     

Tissue     

Remarks     

Genes screened     

Variants found     

Owner     
0000091958 DNA PCR;SEQ - - BTK 1 Qing Wang



Variants

1 entry on 1 page. Showing entry 1.
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Chr     

Allele     

Effect     

AscendingDNA change (genomic) (hg19)     

DNA change (hg38)     

Published as     

ISCN     

DB-ID     

Variant remarks     

Reference     

ClinVar ID     

dbSNP ID     

Origin     

Segregation     

Frequency     

Re-site     

VIP     

Methylation     

Owner     

Gene     

Codon change     

IDbase Accession Number     

VariO/DNA     

VariO/Protein     

VariO/RNA     

Exon     

DNA change (cDNA)     

Haplotype     

ClassClinical     

RNA change     

Protein     

P-domain     

Exon_old     

DNA/Legacy     

Function/GVS     

Predict/AGVGD     

Predict/Grantham     

Predict/MutationTaster     

Predict/PolyPhen     

Predict/PolyPhenScore     

Predict/SIFT     

Predicted     

Type/DNA     

Conservation     

CpG     

Enzyme activity     

mRNA level     

Predict/CADD     

Predict/Splice     

Protein level     
X Unknown +?/. g.100630272_100630276del g.101375284_101375288del 128_133delAAGCT - BTK_000830 - PubMed: Chen XF, 2016, IDbase_AccNr: A1803 - - Unknown - - - 0 - Qing Wang BTK - - DNA deletion (VariO:0141) - - 2 NM_000061.2:c.-4_-1del - - r.(=) p.(=) - - - - - - - - - - - - - - - - - - -
Legend