Individual #00202900

ID_report -
Reference PubMed: Agalliu 2009
Remarks 40/145 (27.6%) homozygotes among African-American prostate cancer patients (71 heterozygotes)
Gender M
Consanguinity -
Country United States
Population African-American
Age at death -
VIP 0
Data_av -
Treatment -
Panel size 40
Diseases cancer, prostate
Owner name Astrid Out
Database submission license No license selected
Created by Astrid Out


Phenotypes

cancer, prostate (cancer, prostate)   Add phenotype for this disease

AscendingPhenotype ID     

Phenotype details     

Diagnosis/Initial     

Diagnosis/Definite     

Inheritance     

Age/Examination     

Age/Diagnosis     

Age/Onset     

Phenotype/Onset     

Protein     

Tumor/MSI     

Diagnosis/Criteria     

Owner     
0000150047 - - - Unknown - - - - - - - Astrid Out



Screenings


AscendingScreening ID     

Template     

Technique     

Tissue     

Remarks     

Genes screened     

Variants found     

Owner     
0000203931 DNA SEQ leukocyte allelic discrimination, test known variant (group) MUTYH 2 Astrid Out



Variants

2 entries on 1 page. Showing entries 1 - 2.
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Chr     

Allele     

Effect     

Classification method     

Clinical classification     

AscendingDNA change (genomic) (hg19)     

DNA change (hg38)     

Published as     

ISCN     

DB-ID     

Variant remarks     

Reference     

ClinVar ID     

dbSNP ID     

Origin     

Segregation     

Frequency     

Re-site     

VIP     

Methylation     

Owner     

Gene     

IDbase Accession Number     

VariO/DNA     

VariO/Protein     

VariO/RNA     

Exon     

DNA change (cDNA)     

Haplotype     

RNA change     

Protein     

P-domain     

Exon_old     

Function/GVS     

Predict/AGVGD     

Predict/Grantham     

Predict/MutationTaster     

Predict/PolyPhen     

Predict/PolyPhenScore     

Predict/SIFT     

Predicted     

Type/DNA     

Conservation     

CpG     

Enzyme activity     

mRNA level     

Predict/CADD     

Predict/Splice     

Legacy protein change     

Protein level     
1 Parent #1 ?/. - VUS g.45810091A>G g.45344419A>G - - MUTYH_000039 NM_001128425.1(MUTYH): c.-216-3949T>C; NG_008189.1(MUTYH):g.1052T>C; NM_007170.2(TESK2):c.*421T>C; NT_032977.8:g.15782009A>G PubMed: Agalliu 2009 - rs9429072 Unknown - 151/290=52.1% - 0 - Astrid Out MUTYH - - - - _1 NM_001128425.1:c.-216-3949T>C - r.(=) p.(=) - - - - - - - - - - - - - - - - - - -
1 Parent #2 ?/. - VUS g.45810091A>G g.45344419A>G - - MUTYH_000039 NM_001128425.1(MUTYH): c.-216-3949T>C; NG_008189.1(MUTYH):g.1052T>C; NM_007170.2(TESK2):c.*421T>C; NT_032977.8:g.15782009A>G PubMed: Agalliu 2009 - rs9429072 Unknown - 151/290=52.1% - 0 - Astrid Out MUTYH - - - - _1 NM_001128425.1:c.-216-3949T>C - r.(=) p.(=) - - - - - - - - - - - - - - - - - - -
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