Individual #00265647

ID_report Fam? / 11R-00685
Reference PubMed: Monies 2016
Remarks 759-gene panel analysis 50 patients suspected of LGMD
Gender -
Consanguinity -
Country Saudi Arabia
Population -
Age at death -
VIP 0
Data_av -
Treatment -
Panel size 1
Diseases LGMD
Owner name Johan den Dunnen
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by Johan den Dunnen


Phenotypes

dystrophy, muscular, limb-girdle (LGMD) (LGMD)   Add phenotype for this disease

AscendingPhenotype ID     

Phenotype details     

Diagnosis/Initial     

Diagnosis/Definite     

Inheritance     

Age/Examination     

Age/Diagnosis     

Age/Onset     

Phenotype/Onset     

Protein     

Owner     
0000203434 - LGMD - Unknown - - - - - Johan den Dunnen



Screenings


AscendingScreening ID     

Template     

Technique     

Tissue     

Remarks     

Genes screened     

Variants found     

Owner     
0000266770 DNA SEQ;SEQ-NG - 759-gene panel neurological disorders ALG2 1 Johan den Dunnen



Variants

1 entry on 1 page. Showing entry 1.
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Chr     

Allele     

Effect     

Classification method     

Clinical classification     

AscendingDNA change (genomic) (hg19)     

DNA change (hg38)     

Published as     

ISCN     

DB-ID     

Variant remarks     

Reference     

ClinVar ID     

dbSNP ID     

Origin     

Segregation     

Frequency     

Re-site     

VIP     

Methylation     

Owner     

Gene     

IDbase Accession Number     

VariO/DNA     

VariO/Protein     

VariO/RNA     

Exon     

DNA change (cDNA)     

Haplotype     

RNA change     

Protein     

P-domain     

Exon_old     

Function/GVS     

Predict/AGVGD     

Predict/Grantham     

Predict/MutationTaster     

Predict/PolyPhen     

Predict/PolyPhenScore     

Predict/SIFT     

Predicted     

Type/DNA     

Conservation     

CpG     

Enzyme activity     

mRNA level     

Predict/CADD     

Predict/Splice     

Legacy protein change     

Protein level     
9 Both (homozygous) +/. ACMG pathogenic g.101983953_101983963delinsCGGGGACT g.99221671_99221681delinsCGGGGACT - - ALG2_000009 ACMG PVS1, PP1-S, PM2, PM3, PM4, PP1, PP3, PP4 PubMed: Monies 2016 - - Germline - - - 0 - Johan den Dunnen ALG2 - - - - - NM_033087.3:c.214_224delinsAGTCCCCG - r.(?) p.(Gly72_Leu75delinsSerProArg) - - - - - - - - - - - - - - - - - - -
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