Individual #00315455

ID_report -
Reference PubMed: Hammer 2010
Remarks Pharmacogenetic study
Gender -
Consanguinity -
Country Germany
Population white
Age at death -
VIP 0
Data_av -
Treatment -
Panel size 1
Diseases cancer
Owner name Louise Amlie-Wolf
Database submission license No license selected
Created by Louise Amlie-Wolf


Phenotypes

cancer (cancer)   Add phenotype for this disease

AscendingPhenotype ID     

Phenotype details     

Diagnosis/Initial     

Diagnosis/Definite     

Inheritance     

Age/Examination     

Age/Diagnosis     

Age/Onset     

Phenotype/Onset     

Protein     

Tumor/MSI     

Diagnosis/Criteria     

Cancer/Sub_type     

Owner     
0000239207 chemotherapy-induced nausea and vomiting cancer - Unknown - - - - - - - - Louise Amlie-Wolf



Screenings


AscendingScreening ID     

Template     

Technique     

Tissue     

Remarks     

Genes screened     

Variants found     

Owner     
0000316631 DNA SEQ blood - HTR3D 1 Louise Amlie-Wolf



Variants

1 entry on 1 page. Showing entry 1.
Legend   How to query  

Chr     

Allele     

Effect     

Classification method     

Clinical classification     

AscendingDNA change (genomic) (hg19)     

DNA change (hg38)     

Published as     

ISCN     

DB-ID     

Variant remarks     

Reference     

ClinVar ID     

dbSNP ID     

Origin     

Segregation     

Frequency     

Re-site     

VIP     

Methylation     

Owner     

Gene     

Codon change     

IDbase Accession Number     

VariO/DNA     

VariO/Protein     

VariO/RNA     

Exon     

DNA change (cDNA)     

Haplotype     

RNA change     

Protein     

P-domain     

Exon_old     

Function/GVS     

Predict/AGVGD     

Predict/Grantham     

Predict/MutationTaster     

Predict/PolyPhen     

Predict/PolyPhenScore     

Predict/SIFT     

Predicted     

Type/DNA     

Conservation     

CpG     

Enzyme activity     

mRNA level     

Predict/CADD     

Predict/Splice     

Legacy protein change     

Protein level     
3 Unknown +?/? - association g.183754294G>C g.184036506G>C p.A36G; c.332G>A - HTR3D_000004 - PubMed: Hammer 2010 - rs6443930 Germline - 0.477 (0.408-0.546) +AluI; -HphI, Hpy166II, MnlI 0 - Louise Amlie-Wolf HTR3D - - - - - 3 NM_182537.2:c.107G>C - r.(?) p.(Gly36Ala) N-term, Cys-loop - - - - - - - - - - - - - - - - - -
Legend   How to query