Individual #00457935

ID_report Fam9Pat12
Reference PubMed: Heide 2022
Remarks relative
Gender M
Consanguinity -
Country Algeria
Population -
Age at death -
VIP -
Data_av -
Treatment -
Panel ID 00457934
Panel size 1
Diseases ?
Owner name Johan den Dunnen
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by Johan den Dunnen
Date created 2024-11-21 14:48:01 +01:00 (CET)
Date last edited N/A


Phenotypes

unclassified / mixed (?)   Add phenotype for this disease

AscendingPhenotype ID     

Diagnosis/Initial     

Diagnosis/Definite     

Phenotype details     

Inheritance     

Age/Examination     

Age/Diagnosis     

Age/Onset     

Phenotype/Onset     

Protein     

Tumor/MSI     

Diagnosis/Criteria     

Owner     
0000346385 GM3 synthase deficiency SPDRS see paper; ..., no feeding difficulties; irritability; severe intellectual disability; not sitting; not walking; nonverbal;  ; no hearing loss; no eye contact; no optic atrophy/pale papillae; no epilepsy; no microcephaly (SD-1.3); no hypotrophy; choreo-athetosis; normal pigmentation skin Familial, autosomal recessive 3y6m - - - - - - Johan den Dunnen



Screenings


AscendingScreening ID     

Template     

Technique     

Tissue     

Remarks     

Genes screened     

Variants found     

Owner     
0000459555 DNA SEQ;SEQ-NG - - - 1 Johan den Dunnen



Variants

1 entry on 1 page. Showing entry 1.
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Chr     

Allele     

Effect     

Classification method     

Clinical classification     

AscendingDNA change (genomic) (hg19)     

DNA change (hg38)     

Published as     

ISCN     

DB-ID     

Variant remarks     

Reference     

ClinVar ID     

dbSNP ID     

Origin     

Segregation     

Frequency     

Re-site     

VIP     

Methylation     

Owner     

Gene     

IDbase Accession Number     

VariO/DNA     

VariO/Protein     

VariO/RNA     

Exon     

DNA change (cDNA)     

Haplotype     

RNA change     

Protein     

P-domain     

Exon_old     

Function/GVS     

Predict/AGVGD     

Predict/MutationTaster     

Predict/SIFT     

Predicted     

Type/DNA     

CpG     

Enzyme activity     

mRNA level     

Predict-BioInf     

Legacy protein change     

Protein level     
2 Both (homozygous) +?/. - likely pathogenic (recessive) g.86067269A>G g.85840146A>G - - ST3GAL5_000026 - PubMed: Heide 2022 - - Germline - - - - - Johan den Dunnen ST3GAL5 - - - - - NM_003896.3:c.1255T>C - r.(?) p.(Ter419ArgextTer38) - - - - - - - - - - - - - -
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