Global Variome shared LOVD
SLC22A4 (solute carrier family 22 (organic cation/...))
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Phenotypes for disease #00038 (LS (Leigh syndrome (LS)), OMIM:256000)
Legend
Please note that a short description of a certain column can be displayed when you move your mouse cursor over the column's header and hold it still. Below, a more detailed description is shown per column.
Diagnosis/Initial
: initial diagnosis, before molecular testing
Inheritance
: Indicates the inheritance of the phenotype in the family; unknown, familial (autosomal/X-linked, dominant/ recessive), paternal (Y-linked), maternal (mitochondrial), isolated (sporadic) or complex
All options:
Unknown
Familial
Familial, autosomal dominant
Familial, autosomal recessive
Familial, X-linked
Familial, X-linked dominant
Familial, X-linked dominant, male sparing
Familial, X-linked recessive
Paternal, Y-linked
Maternal, mitochondrial
Isolated (sporadic)
Di-genic
Complex
- = Not applicable
Age/Examination
: age at which the individual was examined.
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Diagnosis/Definite
: phenotype individual after molecular testing (OMIM abbreviation)
Age/Diagnosis
: age diagnosis was confirmed
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Age/Onset
: Age first symptoms disease appeared in individual:
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Phenotype/Onset
: individual's phenotype at Age/Onset described using HPO
Phenotype details
: additional information on the phenotype of the individual, preferably use HPO terms only (http://www.human-phenotype-ontology.org/)
Protein
: result from protein staining
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62 entries on 1 page. Showing entries 1 - 62.
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How to query
Phenotype ID
Diagnosis/Initial
Inheritance
Age/Examination
Diagnosis/Definite
Age/Diagnosis
Age/Onset
Phenotype/Onset
Phenotype details
Protein
Owner
Individual ID
0000003234
-
Familial, autosomal recessive
-
-
-
-
-
failure to thrive, dysphagia, recurrent vomiting, apnoea, developmental regression
-
Robert McFarland
00004537
0000003235
-
Familial, autosomal recessive
-
-
-
-
-
-
-
Robert McFarland
00004538
0000003236
-
Familial, autosomal recessive
-
-
-
-
-
-
-
Robert McFarland
00004539
0000052027
-
Familial, autosomal recessive
-
-
-
-
-
-
-
Tonino Ercolino
00072357
0000052028
-
Familial, autosomal recessive
-
-
-
-
-
Epilepsy, psychomotor retardation, and tetraspasticity.
-
Jean-Pierre Bayley
00072358
0000052030
-
Familial, autosomal recessive
-
-
-
-
-
Leukodystrophy
-
Tonino Ercolino
00072360
0000052031
-
Familial, autosomal recessive
-
-
-
-
-
-
-
Tonino Ercolino
00072361
0000052765
-
Unknown
-
-
-
-
-
death in infancy respiratory infection and severe hypoglycemia
-
Jean-Pierre Bayley
00073073
0000052788
-
Unknown
-
-
-
-
-
-
-
Herma Renkema
00073096
0000052789
-
Unknown
-
-
-
-
-
no basal ganglia involvement
-
Herma Renkema
00073097
0000052791
-
Unknown
-
-
-
-
-
-
-
Herma Renkema
00073099
0000060377
-
Familial, autosomal recessive
-
-
-
-
-
Leigh syndrome, COX IV deficiency (OMIM:256000)
-
Daniel Trujillano
00080808
0000060552
-
Familial, autosomal recessive
-
-
-
-
-
Leigh syndrome (OMIM:256000)
-
Daniel Trujillano
00080983
0000066703
-
Familial, autosomal recessive
-
-
-
-
-
Leigh's disease
-
Sudha Kohli, Renu Saxena, Ratna Puri, I.C. Verma
00087078
0000139677
Leigh syndrome
Familial, autosomal recessive
-
-
-
-
-
see paper; ...
-
Mariella Simon
00174853
0000139678
Leigh syndrome
Unknown
-
-
-
-
-
?
-
Mariella Simon
00174854
0000139679
atypical Leigh syndrome
Familial, autosomal recessive
-
-
-
-
-
see paper; ...
-
Mariella Simon
00174855
0000153329
-
-
-
-
4y
-
-
Hypotonia, ataxia, ophthalmoplegia,nystagmus
-
Inn-Chi Lee
00205135
0000153330
-
-
-
-
3y
-
-
Hypotonia, ataxia, myoclonic jerks, extrapyramidal movements
-
Inn-Chi Lee
00205137
0000153331
-
-
-
-
-
2y
-
Hypotonia, ataxia, dystonia, Cerebellum, brainstem, and basal ganglia in MRI
-
Inn-Chi Lee
00205138
0000153332
-
-
-
-
1y9m
-
-
atypical
-
Inn-Chi Lee
00205139
0000153333
-
-
-
-
-
-
-
hypotonia, ataxia, apnea
-
Inn-Chi Lee
00205140
0000153334
-
Familial, autosomal recessive
-
-
-
-
-
-
-
Carl Fratter
00205141
0000153335
-
Familial, autosomal recessive
-
-
-
-
-
-
-
Carl Fratter
00205142
0000153336
-
Familial, autosomal recessive
-
-
-
-
-
-
-
Carl Fratter
00205143
0000153337
-
Familial, autosomal recessive
-
-
-
-
-
-
-
Carl Fratter
00205144
0000153338
-
-
-
-
2y
-
-
atypical / Hypotonia, microcephaly, Leucodystrophy in MRI
-
Inn-Chi Lee
00205146
0000153339
-
Familial, autosomal recessive
-
-
-
-
-
-
-
Carl Fratter
00205147
0000153340
-
-
-
-
-
-
-
Hypotonia, ataxia, nystagmus
-
Inn-Chi Lee
00205148
0000153341
-
-
-
-
-
-
-
abnormal MRI in basal ganglia
-
Inn-Chi Lee
00205149
0000153342
-
-
-
-
-
-
-
Down syndrome, cardiovascular malformations, vertebral anomalies, hypotonia, muscle weakness, swallowing difficulties
-
Inn-Chi Lee
00205151
0000153343
-
Familial, autosomal recessive
-
-
-
-
-
-
-
Carl Fratter
00205152
0000153344
-
Familial, autosomal recessive
-
-
-
-
-
-
-
Carl Fratter
00205153
0000153345
-
-
-
-
6y
-
-
-
-
Inn-Chi Lee
00205156
0000153346
-
-
-
-
-
-
-
atypical
-
Inn-Chi Lee
00205145
0000153347
-
-
-
-
-
-
-
atypical
-
Inn-Chi Lee
00205154
0000153417
-
Familial, autosomal recessive
-
-
-
00y01m15d?
-
Global developmental delay (HP:0001263), failure to thrive (HP:0001508), seizures (HP:0001250), elevated blood and CSF lactate levels (HP:0003128)
-
Sze Chern Lim
00205226
0000153419
-
Familial, autosomal recessive
-
-
-
00y04m
-
Global developmental delay (HP:0001263), failure to thrive (HP:0001508), seizures (HP:0001250), increased blood and CSF lactate levels (HP:0003128)
-
Sze Chern Lim
00204778
0000154805
-
Familial, autosomal recessive
-
-
-
00y03m
-
Elevated serum and CSF lactate levels (HP:0003128), elevated CSF and serum pyruvate (HP:0003542) levels
-
Sze Chern Lim
00207012
0000154807
-
Familial, autosomal recessive
-
-
-
00y06m
-
Elevated plasma and CSF lactate levels (HP:0003128), profound mental retardation (HP:0002187), seizures (HP:0001250)
-
Sze Chern Lim
00207013
0000154809
-
Familial, autosomal recessive
-
-
-
00y04m
-
seizures (HP:0001250), delayed motor milestones (HP:0001270), increased CSF lactate (HP:0002490)
-
Sze Chern Lim
00207014
0000155191
-
Familial, autosomal recessive
-
-
-
00y04m
-
Leigh-like, profound global developmental delay(HP:0001263), hypotonia and seizures (HP:0001250)
-
Sze Chern Lim
00207418
0000155193
-
Familial, autosomal recessive
-
-
-
00y09m
-
seizures (HP:0001250), developmental delay, hypotonia, failure to thrive (HP:0001508), increased blood lactate (HP:0002151)
-
Sze Chern Lim
00207419
0000155196
-
Familial, autosomal recessive
-
-
-
00y06m
-
Lactic acidosis in blood and CSF (HP:0003128), hypotonic, seizures commenced before 8mo, severe hearing deficit and visual impairment
-
Sze Chern Lim
00207420
0000155198
-
Familial, autosomal recessive
-
-
-
00y04m
-
Leigh-like, developmental delay, hypotonia, seizures, elevated lactic acid and alanine levels in the urine
-
Sze Chern Lim
00207421
0000155200
-
Familial, autosomal recessive
00y04m
-
-
-
-
blood and CSF lactate levels, and blood pyruvate level were elevated. Cranial MRI showed high-intensity signals in the putamen. Poor neurological development with myoclonic spasms, cortical blindness, and feeding difficulties.
-
Sze Chern Lim
00207422
0000172718
Leigh syndrome
-
-
18m
-
-
-
failure to thrive,psychomotor regression,seizures and vomiting,increased lactate
-
Wenjuan Qiu
00228779
0000209179
Leigh syndrome
Familial, autosomal recessive
-
-
-
-
-
see paper; ...
-
Johan den Dunnen
00274234
0000209180
Leigh syndrome
Familial, autosomal recessive
-
-
-
-
-
see paper; ...
-
Johan den Dunnen
00274235
0000209181
Leigh syndrome
Familial, autosomal recessive
-
-
-
-
-
see paper; ...
-
Johan den Dunnen
00274236
0000230648
late-onset Leigh syndrome
Familial, autosomal recessive
-
-
-
-
-
see paper; ...
-
Johan den Dunnen
00303585
0000230650
Leigh syndrome
Familial, autosomal recessive
18y
LS
-
04y
-
see paper; ...
-
Johan den Dunnen
00303587
0000230651
Leigh syndrome
Familial, autosomal recessive
39y
LS
-
04y
-
see paper; ...
-
Johan den Dunnen
00303588
0000231995
Leigh syndrome
Familial, autosomal recessive
-
ECHS1D
-
-
-
see paper; ..., fatal Leigh disease, increased excretion of S-(2-carboxypropyl)cysteine and several other metabolites
-
Johan den Dunnen
00306151
0000232014
Leigh syndrome
Familial, autosomal recessive
-
-
-
-
-
see paper; ...
-
Mariella Simon
00306170
0000232015
Leigh syndrome
Familial, autosomal recessive
-
ECHS1D
-
-
-
see paper; ...
-
Johan den Dunnen
00306171
0000232016
Leigh syndrome
Familial, autosomal recessive
-
ECHS1D
-
-
-
see paper; ...
-
Johan den Dunnen
00306172
0000326675
Leigh syndrome
Familial, autosomal recessive
01y04m
COXPD51
-
-
-
see paper; ..., 1y4m-died of respiratory failure; low birth weight 632g (− 4.26SD), height 28cm (− 4.7SD), OFC 23.2 cm (− 2.3SD); mental retardation, optic atrophy, MRI brain abnormal bilateral signals basal ganglia/brainstem; severe bilateral hearing loss
-
Johan den Dunnen
00436498
0000326854
-
Familial, autosomal dominant
-
-
-
-
-
-
-
Rosalba Carrozzo
00436739
0000351390
Leigh syndrome
Familial, autosomal recessive
14m15d
-
-
-
failure to thrive
see paper; ..., 14m15d-failure to thrive, microcephaly (OFC 41cm, Z-4.7), hypotonia, gross motor skills <4m skill level), fine motor skills 6m level), no expressive language skills attendance to voices, nystagmus, esotropi, no retinal pathology
-
Johan den Dunnen
00466005
0000351391
Leigh syndrome
Familial, autosomal recessive
27y
-
-
-
fever unknwn origin
see paper; ..., fever unknown origin; sub-acute onset cognitive-motor slowing, lethargy, hyperphagia, difficulty in ambulation, oculomotor alterations (mild convergent strabismus left eye with mild abduction deficit, vertical nystagmus primary position, horizontal nystagmus in bilateral gaze settings, complete deficit ocular pursuit movements vertical plane); MRI-brain intra-axial lesions midbrain, tegmentum, and tectal plate, with extension along medial longitudinal fasciculus, with modest mass effect, linear enhancement, increased perfusion indices; lactic acid peak on spectroscopy
-
Johan den Dunnen
00466006
0000351392
Leigh syndrome
Familial, autosomal recessive
-
-
-
-
born small for gestational age
see paper; ..., born small for gestational age; pregnancy preeclampsia; intensive care nursery for poor feeding for 3w; eat orally, failure to thrive, 11m-gastrostomy tube; global developmental delay without regression, most notably in gross motor skills, 2y-walk; expressive speech, 16m-first babbling, 21m-sign 20–30 word; exercise intolerance; dysmorphic facial features (midfacial hypoplasia, prominent cheeks, micro/retrognathia, epicanthus, down-slanting palpebral fissures, smooth philtrum, thin upper lip; intermittent mild lactatemia
-
Johan den Dunnen
00466007
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