Global Variome shared LOVD
MERTK (c-mer proto-oncogene tyrosine kinase)
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Curators:
Isabelle Audo
and
Christina Zeitz
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Phenotypes for disease #00193 (CHARGE (CHARGE syndrome), OMIM:214800)
Legend
Please note that a short description of a certain column can be displayed when you move your mouse cursor over the column's header and hold it still. Below, a more detailed description is shown per column.
Phenotype details
: additional information on the phenotype of the individual, preferably use HPO terms only (http://www.human-phenotype-ontology.org/)
Diagnosis/Initial
: initial diagnosis, before molecular testing
Diagnosis/Definite
: phenotype individual after molecular testing (OMIM abbreviation)
Inheritance
: Indicates the inheritance of the phenotype in the family; unknown, familial (autosomal/X-linked, dominant/ recessive), paternal (Y-linked), maternal (mitochondrial), isolated (sporadic) or complex
All options:
Unknown
Familial
Familial, autosomal dominant
Familial, autosomal recessive
Familial, X-linked
Familial, X-linked dominant
Familial, X-linked dominant, male sparing
Familial, X-linked recessive
Paternal, Y-linked
Maternal, mitochondrial
Isolated (sporadic)
Di-genic
Complex
- = Not applicable
Age/Examination
: age at which the individual was examined.
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Age/Diagnosis
: age diagnosis was confirmed
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Age/Onset
: Age first symptoms disease appeared in individual:
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Phenotype/Onset
: individual's phenotype at Age/Onset described using HPO
Cleft
: does the individual have a facial cleft (please specify)
All options:
- = no cleft
chin = cleft chin (HP:0011323)
face = cleft facial (HP:0002006)
face midline = cleft facial midline (HP:0100629)
face transverse = cleft facial transverse (HP:0100731)
lip bilateral = cleft lip bilateral (HP:0100336)
lip unilateral = cleft lip unilateral (HP:0100333)
lip lower = cleft lip lower (HP:0010281)
lip median = cleft lip median (HP:0000161)
lip non-mdiline = cleft lip non-mdiline (HP:0100335)
lip upper = cleft lip upper (HP:0000204)
lip upper incomplete = cleft lip upper incomplete (HP:0011340)
lip submucous = cleft lip submucous (HP:0009101)
lip/palate bilateral = cleft lip/palate bilateral (HP:0002744)
lip/palate median = cleft lip/palate median (HP:0008501)
mandible = cleft mandible (HP:0010752)
oral = cleft oral (HP:0000202)
palate = cleft palate (HP:0000175)
palate bilateral = cleft palate bilateral (HP:0100337)
palate unilateral = cleft palate unilateral (HP:0100334)
palate median = cleft palate median (HP:0009099)
palate non-mdiline = cleft palate non-mdiline (HP:0100338)
palate hard = cleft palate hard (HP:0410005)
palate hard submucous = cleft palate hard submucous (HP:0000176)
palate soft = cleft palate soft (HP:0000185)
palate soft submucous = cleft palate soft submucous (HP:0011819)
palate primary = cleft palate primary (HP:0410003)
palate secondary = cleft palate secondary (HP:0410004)
palate hard = cleft palate hard (HP:0410005)
? = unknown
n/a = not analysed
Eye/Orbital
: individual has abnormality orbital region (specify)
All options:
coloboma = coloboma (HP:0000589)
choroidal = choroidal coloboma (HP:0000611)
choroid bilateral = bilateral choroid coloboma (HP:0007956)
choroidoretinal = choroidoretinal coloboma (HP:0000567)
eyelid = eyelid coloboma (HP:0000625)
lower eyelid = lower eyelid coloboma (HP:0000652)
upper eyelid = upper eyelid coloboma (HP:0000636)
irido-fundal = irido-fundal coloboma (HP:0007748)
iris = iris coloboma (HP:0000612)
iris and retina = coloboma of iris and retina (HP:0007744)
lens = lens coloboma (HP:0100719)
macular = macular coloboma (HP:0001116)
ocular = ocular coloboma (HP:0000589)
optic disk (nerve) = optic disk (nerve) coloboma (HP:0000588)
retina = retinal coloboma (HP:0000480)
retinal bilateral = bilateral retinal coloboma (HP:0007808)
globe abnormality (HP:0100886)
cyclopia (HP:0009914)
deeply set eyes (HP:0000490)
hypertelorism (HP:0000316)
hypotelorism (HP:0000601)
proptosis (HP:0000520)
shallow orbits (HP:0000586)
vertical orbital dystopia (HP:0030867)
no = no abnormality
? = unknown
nr = not reported
Protein
: result from protein staining
Eye/Ball
: individual has abnormality eye baal (globe size), please specify
All options:
abnormal = abnormality globe size (HP:0100887)
anophthalmia = anophthalmia (HP:0000528)
anophthalmia true = true anophthalmia (HP:0011478)
axial globe = axial globe length increased (HP:0007800)
cryptophthalmos = cryptophthalmos (HP:0001126)
large eyes = large eyes (HP:0001090)
microphthalmia = microphthalmia (HP:0000568)
microphthalmia bilateral = bilateral microphthalmia (HP:0007633)
microphthalmia unilateral = unilateral microphthalmia (HP:0011480)
normal = normal eye ball
? = unknown
n/a = not analysed
Fistula
: individual has fistula, please specify
All options:
anal = anal fistula (HP:0010447)
anoperineal = anoperineal fistula (HP:0005218)
arteriovenous = arteriovenous fistula (HP:0004947)
arteriovenous celiac/mesenteric = arteriovenous fistulas of celiac and mesenteric vessels (HP:0002642)
arteriovenous peripheral = peripheral arteriovenous fistula (HP:0100784)
arteriovenous pulmonary = pulmonary arteriovenous fistulas (HP:0004952)
bladder = bladder fistula (HP:0004321)
branchial = branchial cleft fistula (HP:0009795)
coronary artery = coronary artery fistula (HP:0011641)
intestinal = intestinal fistula (HP:0100819)
palate = palate fistula (HP:0010294)
pancreatic = pancreatic fistula (HP:0100844)
perineal = perineal fistula (HP:0004871)
pilonidal = pilonidal fistula (HP:0010770)
preauricular = preauricular fistulas (HP:0004467)
rectal = rectal fistula (HP:0100590)
rectoperineal = rectoperineal fistula (HP:0004792)
rectovaginal = rectovaginal fistula (HP:0000143)
sacrococcygeal = sacrococcygeal fistula (HP:0010771)
tracheoesophageal = tracheoesophageal fistula (HP:0002575)
urachus = urachus fistula (HP:0100525)
urethral = urethral fistula (HP:0010480)
urethrovaginal = urethrovaginal fistula (HP:0008716)
urogenital = urogenital fistula (HP:0100589)
vaginal = vaginal fistula (HP:0004320)
vesicovaginal = vesicovaginal fistula (HP:0001586)
no = no fistula
? = unknown
n/a = not analysed
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19 entries on 1 page. Showing entries 1 - 19.
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Legend
How to query
Phenotype ID
Phenotype details
Diagnosis/Initial
Diagnosis/Definite
Inheritance
Age/Examination
Age/Diagnosis
Age/Onset
Phenotype/Onset
Cleft
Eye/Orbital
Protein
Eye/Ball
Fistula
Owner
Individual ID
0000038125
Bilateral cleft lip and palate, Moderate global developmental delay, Micropenis, Cryptorchidism, Anosmia, Mixed hearing impairment, Abnormality of the pinna, Recurrent otitis media, Progressive pes cavus, Scapular winging,
-
-
Familial
-
-
-
-
-
-
-
-
-
Monica T.Y. Wong
00051531
0000060425
CHARGE syndrome (OMIM:214800)
-
-
Isolated (sporadic)
-
-
-
-
-
-
-
-
-
Daniel Trujillano
00080856
0000206957
-
-
-
Isolated (sporadic)
-
-
-
-
-
-
-
-
-
Ah Reum Kim
00267237
0000230702
Abnormal heart morphology (HP:0001627) Choanal atresia (HP:0000453) Abnormality of brain morphology (HP:0012443) Abnormality of the face (HP:0000271) Abnormal ear morphology (HP:0031703)
-
-
Unknown
-
-
-
-
-
coloboma
-
-
-
Valerie Benoit
00303638
0000230703
Abnormal heart morphology (HP:0001627) Choanal atresia (HP:0000453) Intrauterine growth retardation (HP:0001511) Abnormality of brain morphology (HP:0012443) Abnormality of the face (HP:0000271) Abnormal ear morphology (HP:0031703) Polyhydramnios (HP:0001561)
-
-
Unknown
-
-
-
-
?
-
-
n/a
-
Valerie Benoit
00303639
0000230704
Choanal atresia (HP:0000453) Abnormality of the face (HP:0000271) Oral cleft (HP:0000202) Abnormal ear morphology (HP:0031703)
-
-
Unknown
-
-
-
-
oral
?
-
-
-
Valerie Benoit
00303637
0000230705
Abnormal heart morphology (HP:0001627) Choanal atresia (HP:0000453) Abnormality of the genital system (HP:0000078) Abnormality of the kidney (HP:0000077) Abnormality of the face (HP:0000271) Abnormal ear morphology (HP:0031703)
-
-
Unknown
-
-
-
-
-
nr
-
-
-
Valerie Benoit
00303640
0000231190
Abnormal heart morphology (HP:0001627) Abnormality of the face (HP:0000271) Abnormal ear morphology (HP:0031703) Polyhydramnios (HP:0001561)
-
-
Unknown
-
-
-
-
-
coloboma
-
-
-
Valerie Benoit
00303641
0000231191
Abnormal heart morphology (HP:0001627) Abnormality of the genital system (HP:0000078) Abnormality of the face (HP:0000271) Abnormal ear morphology (HP:0031703) Polyhydramnios (HP:0001561)
-
-
Unknown
-
-
-
-
-
-
-
-
-
Valerie Benoit
00304128
0000231192
Abnormal heart morphology (HP:0001627) Choanal atresia (HP:0000453) Abnormality of the face (HP:0000271) Abnormal ear morphology (HP:0031703) Polyhydramnios (HP:0001561)
-
-
Unknown
-
-
-
-
-
-
-
-
-
Valerie Benoit
00304129
0000232049
-
-
-
Unknown
-
-
-
-
-
-
-
-
-
Sha Hong
00306201
0000242858
see paper; ...
global developmental delay, multiple congenital anomalies
CHARGE
Isolated (sporadic)
07y
-
-
-
-
-
-
-
-
Johan den Dunnen
00324289
0000308143
Abnormal fetal cardiovascular morphology, Hypoplastic left heart, Aortic valve stenosis, Congenital malformation of the left heart, Abnormal fetal morphology
prenatal ultra-sound
-
Isolated (sporadic)
-
-
-
-
?
nr
-
?
?
Andreas Laner
00416378
0000325436
Intellectual disability, mild, Hip dysplasia, Macrocephaly, Gait disturbance, Motor delay, Delayed speech and language development
-
-
Isolated (sporadic)
02y
-
-
-
?
nr
-
?
?
Andreas Laner
00435239
0000325558
Abnormality of the genitourinary system, Prelingual sensorineural hearing impairment, Preaxial hand polydactyly, Global developmental delay, Plagiocephaly, Atrial septal defect, Cranial nerve paralysis, Infantile muscular hypotonia
-
-
Isolated (sporadic)
01y
-
-
-
?
nr
-
?
?
Andreas Laner
00435364
0000338918
HP:0000453, HP:0001627
-
CHARGE
Isolated (sporadic)
-
-
-
-
-
-
-
-
-
Marketa Wayhelova
00449773
0000343306
HP:0000104, HP:0001508, HP:0000271, HP:0004484
CHARGE SYNDROME
CHARGE SYNDROME
Isolated (sporadic)
-
-
-
-
-
-
-
-
-
Marketa Wayhelova
00454674
0000344618
HP:0200138, HP:0009603, HP:0000377, HP:0001643, HP:0012020, HP:0002901, HP:0010515
complex neurodevelopmental disorder
CHARGE SYNDROME
Isolated (sporadic)
-
-
-
-
-
-
-
-
-
Marketa Wayhelova
00456088
0000350347
Cleft lip and palate in prenatal sonography
-
-
Isolated (sporadic)
20+5
-
-
-
lip/palate median;oral;palate
-
-
-
-
Andreas Laner
00464285
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