Global Variome shared LOVD
LOVD v.3.0 Build 28 [
Current LOVD status
]
Register as submitter
|
Log in
View all genes
Create a new gene entry
View all transcripts
Create a new transcript information entry
View all variants
View all variants affecting transcripts
Create a new data submission
View active genomic custom columns
Enable more genomic custom columns
View all individuals
Create a new data submission
View active custom columns
Enable more custom columns
View all diseases
Create a new disease information entry
View available phenotype columns
View all screenings
Create a new data submission
View active custom columns
Enable more custom columns
Submit new data
Phenotypes for disease #00207 (CJD (Creutzfeldt-Jakob disease (CJD)), OMIM:123400)
Legend
Please note that a short description of a certain column can be displayed when you move your mouse cursor over the column's header and hold it still. Below, a more detailed description is shown per column.
Phenotype details
: additional information on the phenotype of the individual, preferably use HPO terms only (http://www.human-phenotype-ontology.org/)
Diagnosis/Initial
: initial diagnosis, before molecular testing
Diagnosis/Definite
: phenotype individual after molecular testing (OMIM abbreviation)
Inheritance
: Indicates the inheritance of the phenotype in the family; unknown, familial (autosomal/X-linked, dominant/ recessive), paternal (Y-linked), maternal (mitochondrial), isolated (sporadic) or complex
All options:
Unknown
Familial
Familial, autosomal dominant
Familial, autosomal recessive
Familial, X-linked
Familial, X-linked dominant
Familial, X-linked dominant, male sparing
Familial, X-linked recessive
Paternal, Y-linked
Maternal, mitochondrial
Isolated (sporadic)
Di-genic
Complex
- = Not applicable
Age/Examination
: age at which the individual was examined.
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Age/Diagnosis
: age diagnosis was confirmed
Age/Onset
: Age first symptoms disease appeared in individual:
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Phenotype/Onset
: individual's phenotype at Age/Onset described using HPO
Protein
: result from protein staining
How to query this table
All list views have search fields which can be used to search data. You can search for a complete word or you can search for a part of a search term. If you enclose two or more words in double quotes, LOVD will search for the combination of those words only exactly in the order you specify. Note that search terms are case-insensitive and that wildcards such as * are treated as normal text! For all options, like "and", "or", and "not" searches, or searching for prefixes or suffixes, see the table below.
Operator
Column type
Example
Matches
Text
Arg
all entries containing 'Arg'
space
Text
Arg Ser
all entries containing 'Arg' and 'Ser'
|
Text
Arg|Ser
all entries containing 'Arg' or 'Ser'
!
Text
!fs
all entries not containing 'fs'
^
Text
^p.(Arg
all entries beginning with 'p.(Arg'
$
Text
Ser)$
all entries ending with 'Ser)'
=""
Text
=""
all entries with this field empty
=""
Text
="p.0"
all entries exactly matching 'p.0'
!=""
Text
!=""
all entries with this field not empty
!=""
Text
!="p.0"
all entries not exactly matching 'p.0?'
combination
Text
*|Ter !fs
all entries containing '*' or 'Ter' but not containing 'fs'
Date
2020
all entries matching the year 2020
|
Date
2020-03|2020-04
all entries matching March or April, 2020
!
Date
!2020-03
all entries not matching March, 2020
<
Date
<2020
all entries before the year 2020
<=
Date
<=2020-06
all entries in or before June, 2020
>
Date
>2020-06
all entries after June, 2020
>=
Date
>=2020-06-15
all entries on or after June 15th, 2020
combination
Date
2019|2020 <2020-03
all entries in 2019 or 2020, and before March, 2020
Numeric
23
all entries exactly matching 23
|
Numeric
23|24
all entries exactly matching 23 or 24
!
Numeric
!23
all entries not exactly matching 23
<
Numeric
<23
all entries lower than 23
<=
Numeric
<=23
all entries lower than, or equal to, 23
>
Numeric
>23
all entries higher than 23
>=
Numeric
>=23
all entries higher than, or equal to, 23
combination
Numeric
>=20 <30 !23
all entries with values from 20 to 29, but not equal to 23
Some more advanced examples:
Example
Matches
Asian
all entries containing 'Asian', 'asian', including 'Caucasian', 'caucasian', etc.
Asian !Caucasian
all entries containing 'Asian' but not containing 'Caucasian'
Asian|African !Caucasian
all entries containing 'Asian' or 'African', but not containing 'Caucasian'
"South Asian"
all entries containing 'South Asian', but not containing 'South East Asian'
To sort on a certain column, click on the column header or on the arrows. If that column is already selected to sort on, the sort order will be swapped. The column currently sorted on has a darker blue background color than the other columns. The up and down arrows next to the column name indicate the current sorting direction. When sorting on any field other than the default, LOVD will sort secondarily on the default sort column.
23 entries on 1 page. Showing entries 1 - 23.
10 per page
25 per page
50 per page
100 per page
250 per page
500 per page
1000 per page
Legend
How to query
Phenotype ID
Phenotype details
Diagnosis/Initial
Diagnosis/Definite
Inheritance
Age/Examination
Age/Diagnosis
Age/Onset
Phenotype/Onset
Protein
Owner
Individual ID
0000002909
-
-
-
Familial, autosomal dominant
-
-
-
-
-
Johan den Dunnen
00004169
0000002910
-
-
-
Familial, autosomal dominant
-
-
-
-
-
Johan den Dunnen
00004170
0000002911
-
-
-
Familial, autosomal dominant
-
-
-
-
-
Johan den Dunnen
00004171
0000002912
-
-
-
Familial, autosomal dominant
-
-
-
-
-
Johan den Dunnen
00004172
0000002914
-
-
-
Isolated (sporadic)
-
-
-
-
-
Johan den Dunnen
00004174
0000002923
-
-
-
Isolated (sporadic)
-
-
-
-
-
Johan den Dunnen
00004183
0000002924
-
-
-
Isolated (sporadic)
-
-
-
-
-
Johan den Dunnen
00004184
0000002925
-
-
-
Isolated (sporadic)
-
-
-
-
-
Johan den Dunnen
00004185
0000002927
-
-
-
Familial, autosomal dominant
-
-
-
-
-
Johan den Dunnen
00004187
0000002928
-
-
-
Familial, autosomal dominant
-
-
-
-
-
Johan den Dunnen
00004188
0000002929
dementia, atypical
-
-
Familial, autosomal dominant
-
-
-
-
-
Johan den Dunnen
00004189
0000002935
-
-
-
Familial, autosomal dominant
-
-
-
-
-
Johan den Dunnen
00004195
0000002936
-
-
-
Isolated (sporadic)
-
-
-
-
-
Johan den Dunnen
00004196
0000002937
-
-
-
Isolated (sporadic)
-
-
-
-
-
Johan den Dunnen
00004197
0000002938
-
-
-
Isolated (sporadic)
-
-
-
-
-
Johan den Dunnen
00004198
0000002939
-
-
-
Unknown
-
-
-
-
-
Johan den Dunnen
00004199
0000002940
-
-
-
Unknown
-
-
-
-
-
Johan den Dunnen
00004200
0000002941
-
-
-
Unknown
-
-
-
-
-
Johan den Dunnen
00004201
0000002949
atypical
-
-
Unknown
-
-
-
-
-
Johan den Dunnen
00004209
0000016192
-
-
-
Unknown
-
-
-
-
-
J Beck
00011462
0000016198
see paper; 75y-excessive fatigue, perceived left sided weakness/sensory disturbances feet; in 6m rapid deterioration, recurrent falls, asymmetrical akinetic rigid syndrome, broken pursuit eye movements, myoclonic jerks, mild apraxia with well preserved cognition; MRI high signal change putamen/caudate nuclei bilaterally (particularly right); CSF unremarkable (14-3-3 absent); EEG left hemisphere slow wave activity; declined rapidly, died without post-mortem examination
-
-
Isolated (sporadic)
75y
-
-
-
-
Johan den Dunnen
00017845
0000016211
see paper
-
-
Familial, autosomal dominant
-
-
-
-
-
Johan den Dunnen
00017856
0000016212
see paper
-
-
Familial
-
-
-
-
-
Johan den Dunnen
00017857
10 per page
25 per page
50 per page
100 per page
250 per page
500 per page
1000 per page
Legend
How to query
Powered by
LOVD v.3.0
Build 28
LOVD software ©2004-2022
Leiden University Medical Center