Global Variome shared LOVD
ZNF441 (zinc finger protein 441)
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Phenotypes for disease #00513 (HNPCC1 (cancer, colorectal, nonpolyposis, hereditary, type 1), OMIM:120435)
Legend
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Phenotype details
: additional information on the phenotype of the individual, preferably use HPO terms only (http://www.human-phenotype-ontology.org/)
Diagnosis/Initial
: initial diagnosis, before molecular testing
Diagnosis/Definite
: phenotype individual after molecular testing (OMIM abbreviation)
Inheritance
: Indicates the inheritance of the phenotype in the family; unknown, familial (autosomal/X-linked, dominant/ recessive), paternal (Y-linked), maternal (mitochondrial), isolated (sporadic) or complex
All options:
Unknown
Familial
Familial, autosomal dominant
Familial, autosomal recessive
Familial, X-linked
Familial, X-linked dominant
Familial, X-linked dominant, male sparing
Familial, X-linked recessive
Paternal, Y-linked
Maternal, mitochondrial
Isolated (sporadic)
Di-genic
Complex
- = Not applicable
Age/Examination
: age at which the individual was examined.
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Age/Diagnosis
: age diagnosis was confirmed
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Age/Onset
: Age first symptoms disease appeared in individual:
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Phenotype/Onset
: individual's phenotype at Age/Onset described using HPO
Protein
: result from protein staining
Tumor/IHC
: tumour IHC
Tumor/MSI
: tumor MSI (micro-sattelite instability); MSI-H (MSI-high), MSI-L (MSI-low), MSS ( microsatellite stable), ? (unknown), n/a (not analysed)
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combination
Text
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Date
2020
all entries matching the year 2020
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Date
2020-03|2020-04
all entries matching March or April, 2020
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Date
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all entries not matching March, 2020
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Date
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all entries before the year 2020
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Date
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Date
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Date
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all entries on or after June 15th, 2020
combination
Date
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all entries in 2019 or 2020, and before March, 2020
Numeric
23
all entries exactly matching 23
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Numeric
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all entries exactly matching 23 or 24
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Numeric
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all entries not exactly matching 23
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Numeric
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all entries lower than 23
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Numeric
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all entries lower than, or equal to, 23
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Numeric
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Numeric
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combination
Numeric
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all entries with values from 20 to 29, but not equal to 23
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Matches
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all entries containing 'Asian', 'asian', including 'Caucasian', 'caucasian', etc.
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all entries containing 'South Asian', but not containing 'South East Asian'
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13 entries on 1 page. Showing entries 1 - 13.
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Legend
How to query
Phenotype ID
Phenotype details
Diagnosis/Initial
Diagnosis/Definite
Inheritance
Age/Examination
Age/Diagnosis
Age/Onset
Phenotype/Onset
Protein
Tumor/IHC
Tumor/MSI
Owner
Individual ID
0000029149
Caecal Adenocarcinoma
-
-
Unknown
-
-
46y
-
-
MLH1:Positive; MSH2:Positive; MSH6:Positive; PMS2:Positive (PMS2 had weak focal positivity)
MSI-H
Ruth Armstrong
00038793
0000034320
Endometrial (53y)
-
-
Unknown
-
-
-
-
-
MLH1, MSH2+, MSH6-, PMS2+
-
InSiGHT - John-Paul Plazzer
00046950
0000038642
-
-
-
Unknown
-
-
-
-
-
MLH1+, MSH2+, MSH6+, PMS2-
MSI-H
Ian Berry
00052040
0000038643
-
-
-
Unknown
-
-
-
-
-
MLH1+, MSH2+, MSH6+, PMS2- LOST (tumour & normal tissue)
MSI-H
Ian Berry
00052042
0000038644
-
-
-
Unknown
-
-
-
-
-
MLH1+, MSH2+, MSH6+, PMS2-
n/a
Ian Berry
00052043
0000043905
HNPCC3, ovarian cancer 43y, colon cancer 51y, endometrial cancer 65y; family history A+
-
-
Familial
-
-
43y
-
-
-
-
Johan den Dunnen
00057225
0000043906
colorectal cancer 42y
-
-
Familial
-
-
42y
-
-
-
-
Johan den Dunnen
00057226
0000244582
HP:0002672
Signet ring cell carcinoma of rectum
HNPCC (Lynch syndrome)
Familial, autosomal dominant
23y
25y
23y
HP:0002672
-
-
Microsatellite stable
Harsh Sheth
00326097
0000244583
HP:0002672
Adenocarcinoma of caecum and ascending colon
Lynch syndrome (HNPCC)
Familial, autosomal dominant
37y
37y
37y
HP:0002672
-
-
Microsatellite unstable
Harsh Sheth
00326098
0000278409
-
Adenocarcinoma of the ascending colon
-
Familial, autosomal dominant
-
-
-
-
-
-
-
Andreas Laner
00384619
0000295786
Transverse colon cancer diagnosed at age 65, 10 tubular adenomas with low grade dysplasia and 10 serrated polyps
-
-
Familial, autosomal dominant
-
-
-
-
-
NAD
-
Sarah Collis
00403039
0000308522
-
Lynch syndrome, colorectal cancer
OMIM 120435
Familial, autosomal dominant
-
29y
-
-
-
-
-
Farid Cherbal
00417005
0000351450
stomach cancer (HP:0012126)
stomach cancer
HNPCC1
Familial, autosomal dominant
61y
61y
-
-
MSH2, MSH6 deficient
MSH2, MSH6 deficient
-
Harsh Sheth
00466065
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