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Phenotypes for disease #00520 (HNPCC8 (cancer, colorectal, nonpolyposis, hereditary, type 8 (HNPCC-8)), OMIM:613244)
Legend
Please note that a short description of a certain column can be displayed when you move your mouse cursor over the column's header and hold it still. Below, a more detailed description is shown per column.
Phenotype details
: additional information on the phenotype of the individual, preferably use HPO terms only (http://www.human-phenotype-ontology.org/)
Diagnosis/Initial
: initial diagnosis, before molecular testing
Diagnosis/Definite
: phenotype individual after molecular testing (OMIM abbreviation)
Inheritance
: Indicates the inheritance of the phenotype in the family; unknown, familial (autosomal/X-linked, dominant/ recessive), paternal (Y-linked), maternal (mitochondrial), isolated (sporadic) or complex
All options:
Unknown
Familial
Familial, autosomal dominant
Familial, autosomal recessive
Familial, X-linked
Familial, X-linked dominant
Familial, X-linked dominant, male sparing
Familial, X-linked recessive
Paternal, Y-linked
Maternal, mitochondrial
Isolated (sporadic)
Di-genic
Complex
- = Not applicable
Age/Examination
: age at which the individual was examined.
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Age/Diagnosis
: age diagnosis was confirmed
Age/Onset
: Age first symptoms disease appeared in individual:
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Phenotype/Onset
: individual's phenotype at Age/Onset described using HPO
Protein
: result from protein staining
Diagnosis/Criteria
: why was individual tested?
Tumor/MSI
: tumor MSI (micro-sattelite instability); MSI-H (MSI-high), MSI-L (MSI-low), MSS ( microsatellite stable), ? (unknown), n/a (not analysed)
How to query this table
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Column type
Example
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Text
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all entries containing 'Arg'
space
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|
Text
Arg|Ser
all entries containing 'Arg' or 'Ser'
!
Text
!fs
all entries not containing 'fs'
^
Text
^p.(Arg
all entries beginning with 'p.(Arg'
$
Text
Ser)$
all entries ending with 'Ser)'
=""
Text
=""
all entries with this field empty
=""
Text
="p.0"
all entries exactly matching 'p.0'
!=""
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!=""
all entries with this field not empty
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Text
!="p.0"
all entries not exactly matching 'p.0?'
combination
Text
*|Ter !fs
all entries containing '*' or 'Ter' but not containing 'fs'
Date
2020
all entries matching the year 2020
|
Date
2020-03|2020-04
all entries matching March or April, 2020
!
Date
!2020-03
all entries not matching March, 2020
<
Date
<2020
all entries before the year 2020
<=
Date
<=2020-06
all entries in or before June, 2020
>
Date
>2020-06
all entries after June, 2020
>=
Date
>=2020-06-15
all entries on or after June 15th, 2020
combination
Date
2019|2020 <2020-03
all entries in 2019 or 2020, and before March, 2020
Numeric
23
all entries exactly matching 23
|
Numeric
23|24
all entries exactly matching 23 or 24
!
Numeric
!23
all entries not exactly matching 23
<
Numeric
<23
all entries lower than 23
<=
Numeric
<=23
all entries lower than, or equal to, 23
>
Numeric
>23
all entries higher than 23
>=
Numeric
>=23
all entries higher than, or equal to, 23
combination
Numeric
>=20 <30 !23
all entries with values from 20 to 29, but not equal to 23
Some more advanced examples:
Example
Matches
Asian
all entries containing 'Asian', 'asian', including 'Caucasian', 'caucasian', etc.
Asian !Caucasian
all entries containing 'Asian' but not containing 'Caucasian'
Asian|African !Caucasian
all entries containing 'Asian' or 'African', but not containing 'Caucasian'
"South Asian"
all entries containing 'South Asian', but not containing 'South East Asian'
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70 entries on 1 page. Showing entries 1 - 70.
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Legend
How to query
Phenotype ID
Phenotype details
Diagnosis/Initial
Diagnosis/Definite
Inheritance
Age/Examination
Age/Diagnosis
Age/Onset
Phenotype/Onset
Protein
Diagnosis/Criteria
Tumor/MSI
Owner
Individual ID
0000138603
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173749
0000138604
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173750
0000138605
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173751
0000138606
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173752
0000138607
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173753
0000138608
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173754
0000138609
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173755
0000138610
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173756
0000138611
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173757
0000138612
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173758
0000138613
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173759
0000138614
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173760
0000138615
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173761
0000138616
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173762
0000138617
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173763
0000138618
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173764
0000138619
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173765
0000138620
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173766
0000138621
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173767
0000138622
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173768
0000138623
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173769
0000138624
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173770
0000138625
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173771
0000138626
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173772
0000138627
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173773
0000138628
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173774
0000138629
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173775
0000138630
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173776
0000138631
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173777
0000138632
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173778
0000138633
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173779
0000138634
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173780
0000138635
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173781
0000138636
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173782
0000138637
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173783
0000138638
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173784
0000138639
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173785
0000138640
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173786
0000138641
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173787
0000138642
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173788
0000138643
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173789
0000138644
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173790
0000138645
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173791
0000138646
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173792
0000138647
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173793
0000138648
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173794
0000138649
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173795
0000138650
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173796
0000138651
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173797
0000138652
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173798
0000138653
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173799
0000138654
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173800
0000138655
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173801
0000138656
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173802
0000138657
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173803
0000138658
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173804
0000138659
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173805
0000138660
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173806
0000138661
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173807
0000138662
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173808
0000138663
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173809
0000138664
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173810
0000138665
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173811
0000138666
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
44y
-
-
-
-
-
-
Mamata Sivagnanam
00173812
0000138667
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173813
0000138668
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173814
0000138669
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173815
0000138670
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173816
0000138671
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173817
0000138672
see paper; …
Lynch syndrome
HNPCC-8
Familial, autosomal dominant
-
-
-
-
-
-
-
Mamata Sivagnanam
00173818
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