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Phenotypes for disease #00610 (CDLS1 (Cornelia de Lange syndrome, type 1 (CDLS-1)), OMIM:122470)
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Please note that a short description of a certain column can be displayed when you move your mouse cursor over the column's header and hold it still. Below, a more detailed description is shown per column.
Phenotype details
: additional information on the phenotype of the individual, preferably use HPO terms only (http://www.human-phenotype-ontology.org/)
Diagnosis/Initial
: initial diagnosis, before molecular testing
Diagnosis/Definite
: phenotype individual after molecular testing (OMIM abbreviation)
Inheritance
: Indicates the inheritance of the phenotype in the family; unknown, familial (autosomal/X-linked, dominant/ recessive), paternal (Y-linked), maternal (mitochondrial), isolated (sporadic) or complex
All options:
Unknown
Familial
Familial, autosomal dominant
Familial, autosomal recessive
Familial, X-linked
Familial, X-linked dominant
Familial, X-linked dominant, male sparing
Familial, X-linked recessive
Paternal, Y-linked
Maternal, mitochondrial
Isolated (sporadic)
Di-genic
Complex
- = Not applicable
Age/Examination
: age at which the individual was examined.
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Age/Diagnosis
: age diagnosis was confirmed
Age/Onset
: Age first symptoms disease appeared in individual:
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Phenotype/Onset
: individual's phenotype at Age/Onset described using HPO
Growth
: does the individual have abnormal growth (pre- and post-natal)
All options:
normal = normal growth
abnormal = growth abnormality (HP:0001507)
delayed = delayed (HP:00001510)
overgrowth = overgrowth (HP:0001548)
overgrowth prenatal = prenatal overgrowth (HP:0001548)
overgrowth postnatal = postnatal overgrowth (HP:0001548)
retardation prenatal = prenatal growth retardation (HP:0001511, IUGR)
no retardation prenatal = no prenatal growth retardation (-HP:0001511)
retardation prenatal mild = mild prenatal growth retardation (HP:0008883)
retardation prenatal moderate = moderate prenatal growth retardation (HP:0011408)
retardation prenatal severe = severe prenatal growth retardation (HP:0008846)
retardation postnatal = postnatal growth retardation (HP:0008897)
retardation postnatal mild = mild postnatal growth retardation (HP:0001530)
retardation postnatal moderate = moderate postnatal growth retardation (HP:0008855)
retardation postnatal severe = severe postnatal growth retardation (HP:0008850)
? = unknown
n/a = not analysed
Head/Size
: individual has abnormal size of the head
All options:
macrocephaly = macrocephaly (HP:0000256)
no macrocephaly = no macrocephaly (-HP:0000256)
macrocephaly congenital = congenital macrocephaly (HP:0004488)
no macrocephaly congenital = no congenital macrocephaly (-HP:0004488)
macrocephaly postnatal = postnatal macrocephaly (HP:0005490)
macrocephaly progressive = progressive macrocephaly (HP:0004481)
macrocephaly relative = relative macrocephaly (HPO_0004482)
microcephaly = microcephaly (yes <3rd centile, HP:0000252)
no = no microcephaly (-HP:0000252, -)
congenital = congenital microcephaly (HP:0011451)
microcephaly mild = mild microcephaly (HP:0040196)
postnatal = postnatal microcephaly (HP:0005484)
progressive = postnatal progressive microcephaly (HP:0000253)
? = unknown
nr = not reported
n/a = not applicable
MotorSkills
: development motor skills; age head control (in months), age sitting (without support, in months), age walking (without support, in months); head:7m, sit:10m, walk:24m, delayed gross motor development (HP:0002194), delayed fine motor development (HP:0010862)
Speech
: does the individual have normal speech and language development
All options:
- = no speech delay
speech delayed (HP:0000750)
mild = mild speech delayed (HP:0000750)
mild-moderate = mild-moderate speech delayed (HP:0000750)
moderate = speech delayed (HP:0000750)
moderate-severe = moderate-severe speech delayed (HP:0000750),
severe =severe speech delayed (HP:0000750)
no speech = no speech (HP:0001344)
loss of speech = loss of speech (HP:0002371)
poor speech = poor speech (HP:0002465)
nasal = nasal speech (HP:0001611)
nasal/dysarthic =nasal, dysarthic speech (HP:0008376)
hyponasal = hyponasal speech (HP:0100271)
articulation difficulties = articulation difficulties (HP:0009088)
dysarthria = dysarthria (HP:0001260)
grammar-specific = grammar-specific speech disorder (HP:0006977)
incomprehensible = incomprehensible speech (HP:0002546)
scanning = scanning speech (HP:0002168)
slurred = slurred speech (HP:0001350)
slowed slurred = slowed slurred speech (HP:0007164)
apraxia = speech apraxia (HP:0011098)
? = unknown
n/a = not analysed
Cleft
: does the individual have a facial cleft (please specify)
All options:
- = no cleft
chin = cleft chin (HP:0011323)
face = cleft facial (HP:0002006)
face midline = cleft facial midline (HP:0100629)
face transverse = cleft facial transverse (HP:0100731)
lip bilateral = cleft lip bilateral (HP:0100336)
lip unilateral = cleft lip unilateral (HP:0100333)
lip lower = cleft lip lower (HP:0010281)
lip median = cleft lip median (HP:0000161)
lip non-mdiline = cleft lip non-mdiline (HP:0100335)
lip upper = cleft lip upper (HP:0000204)
lip upper incomplete = cleft lip upper incomplete (HP:0011340)
lip submucous = cleft lip submucous (HP:0009101)
lip/palate bilateral = cleft lip/palate bilateral (HP:0002744)
lip/palate median = cleft lip/palate median (HP:0008501)
mandible = cleft mandible (HP:0010752)
oral = cleft oral (HP:0000202)
palate = cleft palate (HP:0000175)
palate bilateral = cleft palate bilateral (HP:0100337)
palate unilateral = cleft palate unilateral (HP:0100334)
palate median = cleft palate median (HP:0009099)
palate non-mdiline = cleft palate non-mdiline (HP:0100338)
palate hard = cleft palate hard (HP:0410005)
palate hard submucous = cleft palate hard submucous (HP:0000176)
palate soft = cleft palate soft (HP:0000185)
palate soft submucous = cleft palate soft submucous (HP:0011819)
palate primary = cleft palate primary (HP:0410003)
palate secondary = cleft palate secondary (HP:0410004)
palate hard = cleft palate hard (HP:0410005)
? = unknown
n/a = not analysed
Protein
: result from protein staining
Abnormality
: abnormality specific organ/tissue
All options:
abdomen = abdomen (HP:0001438)
blood/blood forming tissue = blood/blood forming tissue (HP:0001871)
breast = breast (HP:0000769)
cardiovascular = cardiovascular system (HP:0001626)
heart = abnormal cardiac morphology (HP:0001627)
vascular = abnormal vasculature (HP:0002597)
connective = connective tissue (HP:0003549)
endocrine = endocrine system (HP:0000818)
genitourinary = genitourinary system (HP:0000119)
genital = genital system (HP:0000078)
urinary= urinary system (HP:0000079)
head/neck = head (face) or neck (HP:0000152)
ear = ear (HP:0000598)
eye = eye (HP:0000478)
face = face (HP:0000271)
immune = immune system (HP:0002715)
integument = integument (HP:0001574)
limbs = limbs (HP:0040064)
metabolism/homeostasis = metabolism/homeostasis (HP:0001939)
musculature = musculature (HP:0003011)
neoplasm = neoplasm (HP:0002664)
nervous = nervous system (HP:0000707)
respiratory = respiratory system (HP:0002086)
skeletal = skeletal system (HP:0000924)
thoracic cavity = thoracic cavity (HP:0045027)
voice = voice (HP:0001608)
no = no abnormality
? = unknown
n/a = not analysed
Hirsutism
: individual has hirsutism (excessive hair growth), please specify
All options:
hirsutism = hirsutism (HP:0001007)
facial = facial hirsutism (HP:0009937)
forehead = frontal hirsutism (HP:0011335)
generalized = generalized hirsutism (HP:0002230)
localized = localized hirsutism (HP:0009889)
lumbosacral = lumbosacral hirsutism (HP:0009747)
no = no hirsutism
? = unknown
n/a = not analysed
Intellectual_dis
: individual has intellectual disability (intellectual disability (mental retardation), HP:0001249,mental retardation); please specify
All options:
yes = intellectual disability (HP:0001249, IQ below 70)
borderline = intellectual disability, borderline (HP:0006889, IQ 70-79)
mild = intellectual disability, mild (HP:0001256, IQ 50-69)
moderate = intellectual disability, moderate (HP:0002342, IQ 35-49)
profound = intellectual disability, profound (HP:0002187, IQ below 20)
severe = intellectual disability, severe (HP:0010864, IQ 20-34)
progressive = intellectual disability, progressive (HP:0006887)
no = no intellectual disability (IQ above 79, -)
? = unknown
n/a = not analysed
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4 entries on 1 page. Showing entries 1 - 4.
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Phenotype ID
Phenotype details
Diagnosis/Initial
Diagnosis/Definite
Inheritance
Age/Examination
Age/Diagnosis
Age/Onset
Phenotype/Onset
Growth
Head/Size
MotorSkills
Speech
Cleft
Protein
Abnormality
Hirsutism
Intellectual_dis
Owner
Individual ID
0000232076
-
-
-
Unknown
-
-
-
-
-
-
-
-
-
-
-
-
-
Sha Hong
00306228
0000253327
-
1month
-
Unknown
-
-
-
-
retardation prenatal
macrocephaly postnatal
-
-
?
-
heart
-
n/a
Andreas Laner
00335380
0000274687
-
-
Cornelia de Lange syndrome
Familial, autosomal dominant
-
-
-
-
-
-
-
-
-
-
-
-
-
LOVD
00380834
0000284504
Intrauterine growth retardation, Short long bone, Abnormality of long bone morphology, Abnormal appendicular skeleton morphology, Prenatal maternal abnormality, Preeclampsia, Abnormality of prenatal development or birth
04mo
-
Isolated (sporadic)
-
-
-
-
retardation prenatal
no macrocephaly congenital
-
?
-
-
limbs
?
?
Andreas Laner
00391016
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