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Phenotypes for disease #00639 (cancer, lung (cancer, lung (adenocarcinoma)), OMIM:211980)
Legend
Please note that a short description of a certain column can be displayed when you move your mouse cursor over the column's header and hold it still. Below, a more detailed description is shown per column.
Phenotype details
: additional information on the phenotype of the individual, preferably use HPO terms only (http://www.human-phenotype-ontology.org/)
Diagnosis/Initial
: initial diagnosis, before molecular testing
Diagnosis/Definite
: phenotype individual after molecular testing (OMIM abbreviation)
Inheritance
: Indicates the inheritance of the phenotype in the family; unknown, familial (autosomal/X-linked, dominant/ recessive), paternal (Y-linked), maternal (mitochondrial), isolated (sporadic) or complex
All options:
Unknown
Familial
Familial, autosomal dominant
Familial, autosomal recessive
Familial, X-linked
Familial, X-linked dominant
Familial, X-linked dominant, male sparing
Familial, X-linked recessive
Paternal, Y-linked
Maternal, mitochondrial
Isolated (sporadic)
Di-genic
Complex
- = Not applicable
Age/Examination
: age at which the individual was examined.
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Age/Diagnosis
: age diagnosis was confirmed
Age/Onset
: Age first symptoms disease appeared in individual:
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Phenotype/Onset
: individual's phenotype at Age/Onset described using HPO
Protein
: result from protein staining
Cancer/Sub_type
: cancer(s) identified in individual
All options:
CDC = collecting duct carcinoma (CDC)
CL = cutaneous leiomyoma (CL)
GIST = gastrointestinal stromal tumor (GIST)
HLRCC = hereditary leiomyomatosis and renal cell cancer (HLRCC)
LCT = leydig cell tumor (LCT)
MCUL = multiple cutaneous leiomyoma (MCUL)
MMAD = masive macronodular adrenocortical disease (MMAD)
OMS = ovarian mucinous cystadenoma (OMS)
ONC = oncocytoma (ONC)
PCC = pheochromocytoma
PCC-EA = pheochromocytoma extra-adrenal
PCC-Z = pheochromocytoma zuckerkandl
PGL = paraganglioma
PGL-B = paraganglioma bladder
PGL-C = paraganglioma cardiac
PGL-CB = paraganglioma carotid body
PGL-EA = paraganglioma extra-adrenal
PGL-F = paraganglioma functional
PGL-HN = paraganglioma head and neck
PGL-IA = paraganglioma intra-abdominal
PGL-J = paraganglioma jugular
PGL-JT = paraganglioma jugulotympanic
PGL-MF = paraganglioma multifocal
PGL-PA = paraganglioma para-aortic
PGL-R = paraganglioma renal
PGL-V = paraganglioma vagal
PGL-Z = paraganglioma zuckerkandl
PMA = pituitary macroadenoma (PMA)
PTC = papillary thyroid carcinoma (PTC)
RCC = renal cell carcinoma (RCC)
STS = soft tissue sarcoma (STS)
UL = uterine leiomyoma (UL)
ULMS = uterine leiomyosarcoma (ULMS)
How to query this table
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Operator
Column type
Example
Matches
Text
Arg
all entries containing 'Arg'
space
Text
Arg Ser
all entries containing 'Arg' and 'Ser'
|
Text
Arg|Ser
all entries containing 'Arg' or 'Ser'
!
Text
!fs
all entries not containing 'fs'
^
Text
^p.(Arg
all entries beginning with 'p.(Arg'
$
Text
Ser)$
all entries ending with 'Ser)'
=""
Text
=""
all entries with this field empty
=""
Text
="p.0"
all entries exactly matching 'p.0'
!=""
Text
!=""
all entries with this field not empty
!=""
Text
!="p.0"
all entries not exactly matching 'p.0?'
combination
Text
*|Ter !fs
all entries containing '*' or 'Ter' but not containing 'fs'
Date
2020
all entries matching the year 2020
|
Date
2020-03|2020-04
all entries matching March or April, 2020
!
Date
!2020-03
all entries not matching March, 2020
<
Date
<2020
all entries before the year 2020
<=
Date
<=2020-06
all entries in or before June, 2020
>
Date
>2020-06
all entries after June, 2020
>=
Date
>=2020-06-15
all entries on or after June 15th, 2020
combination
Date
2019|2020 <2020-03
all entries in 2019 or 2020, and before March, 2020
Numeric
23
all entries exactly matching 23
|
Numeric
23|24
all entries exactly matching 23 or 24
!
Numeric
!23
all entries not exactly matching 23
<
Numeric
<23
all entries lower than 23
<=
Numeric
<=23
all entries lower than, or equal to, 23
>
Numeric
>23
all entries higher than 23
>=
Numeric
>=23
all entries higher than, or equal to, 23
combination
Numeric
>=20 <30 !23
all entries with values from 20 to 29, but not equal to 23
Some more advanced examples:
Example
Matches
Asian
all entries containing 'Asian', 'asian', including 'Caucasian', 'caucasian', etc.
Asian !Caucasian
all entries containing 'Asian' but not containing 'Caucasian'
Asian|African !Caucasian
all entries containing 'Asian' or 'African', but not containing 'Caucasian'
"South Asian"
all entries containing 'South Asian', but not containing 'South East Asian'
To sort on a certain column, click on the column header or on the arrows. If that column is already selected to sort on, the sort order will be swapped. The column currently sorted on has a darker blue background color than the other columns. The up and down arrows next to the column name indicate the current sorting direction. When sorting on any field other than the default, LOVD will sort secondarily on the default sort column.
40 entries on 1 page. Showing entries 1 - 40.
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Legend
How to query
Phenotype ID
Phenotype details
Diagnosis/Initial
Diagnosis/Definite
Inheritance
Age/Examination
Age/Diagnosis
Age/Onset
Phenotype/Onset
Protein
Cancer/Sub_type
Owner
Individual ID
0000027947
lung cancer
-
-
-
-
-
-
-
-
-
Johan den Dunnen
00034549
0000027949
lung cancer
-
-
-
-
-
-
-
-
-
Johan den Dunnen
00034551
0000044738
lung, adenocarcinoma
-
-
Unknown
-
-
-
-
-
-
Johan den Dunnen
00058107
0000083274
Lung cancer
-
-
Unknown
-
-
-
-
-
-
Zoe Baily
00105378
0000083277
Lung cancer
-
-
Unknown
-
-
-
-
-
-
Zoe Baily
00105381
0000083284
Lung cancer
-
-
Unknown
-
-
-
-
-
-
Zoe Baily
00105388
0000083297
Lung cancer
-
-
Unknown
-
-
-
-
-
-
Zoe Baily
00105401
0000203240
fetal adenocarcinoma of the lung
primary lung adenocarcinomas
well-differentiated fetal adenocarcinoma
Unknown
31y
31y
-
-
-
-
Rosemary Ekong
00265438
0000281549
-
lung cancer
-
Unknown
-
-
-
-
-
-
Johan den Dunnen
00152033
0000281558
lung cancer with EML4-ALK translocation
lung cancer
-
Unknown
66y
-
-
-
-
-
Grigorij Yanus
00177086
0000281559
-
-
-
Unknown
-
-
74y
-
-
-
InSiGHT - John-Paul Plazzer
00201838
0000281560
-
-
-
Unknown
-
-
-
-
-
-
Carli Tops
00202549
0000281561
among cancerous tissues of 55 unrelated lungcancer patients
-
-
Unknown
-
-
-
-
-
-
Carli Tops
00202551
0000281562
-
-
-
Unknown
-
-
-
-
-
-
Carli Tops
00202552
0000281563
-
-
-
Unknown
-
-
-
-
-
-
Carli Tops
00202554
0000281564
-
-
-
Unknown
-
-
-
-
-
-
Astrid Out
00202555
0000281565
-
-
-
Unknown
-
-
-
-
-
-
Carli Tops
00202556
0000281566
-
-
-
Unknown
-
-
-
-
-
-
Astrid Out
00202746
0000281567
among 47 lung cancer cell lines
-
-
Unknown
-
-
-
-
-
-
Astrid Out
00202747
0000281568
among 47 lung cancer cell lines
-
-
Unknown
-
-
-
-
-
-
Astrid Out
00202748
0000281569
-
-
-
Unknown
-
-
-
-
-
-
Astrid Out
00202760
0000281570
-
-
-
Unknown
-
-
-
-
-
-
Astrid Out
00202764
0000281571
-
-
-
Unknown
-
-
-
-
-
-
Astrid Out
00202765
0000281572
-
-
-
Unknown
-
-
-
-
-
-
Astrid Out
00203591
0000281573
-
-
-
Unknown
-
-
-
-
-
-
Astrid Out
00203593
0000281574
-
-
-
Unknown
-
-
-
-
-
-
Astrid Out
00203595
0000281575
-
-
-
Unknown
-
-
-
-
-
-
Astrid Out
00203597
0000281576
-
-
-
Unknown
-
-
-
-
-
-
Astrid Out
00203599
0000281577
-
-
-
Unknown
-
-
-
-
-
-
Astrid Out
00203601
0000281578
-
-
-
Unknown
-
-
-
-
-
-
Astrid Out
00203603
0000281579
-
-
-
Unknown
-
-
-
-
-
-
Astrid Out
00203605
0000281580
-
-
-
Unknown
-
-
-
-
-
-
Astrid Out
00203607
0000281581
-
-
-
Unknown
-
-
-
-
-
-
Astrid Out
00203609
0000281582
-
-
-
Unknown
-
-
-
-
-
-
Astrid Out
00203611
0000281583
-
-
-
Unknown
-
-
-
-
-
-
Astrid Out
00203612
0000281584
-
-
-
Unknown
-
-
-
-
-
-
Astrid Out
00203616
0000281585
-
lung cancer
-
Unknown
-
-
-
-
-
-
Johan den Dunnen
00210497
0000281586
-
-
-
Familial, autosomal dominant
-
-
-
-
-
-
Leiyang
00222938
0000281587
adenocarcinoma
-
-
Familial, autosomal dominant
-
-
50y
-
-
-
Joanne van der Vis
00295609
0000281588
-
-
-
Familial, autosomal dominant
-
-
54y
-
-
-
Joanne van der Vis
00295615
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