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Phenotypes for disease #00661 (TRPS1 (trichorhinophalangeal syndrome, type I (TRPS-1)), OMIM:190350)
Legend
Please note that a short description of a certain column can be displayed when you move your mouse cursor over the column's header and hold it still. Below, a more detailed description is shown per column.
Phenotype details
: additional information on the phenotype of the individual, preferably use HPO terms only (http://www.human-phenotype-ontology.org/)
Diagnosis/Initial
: initial diagnosis, before molecular testing
Diagnosis/Definite
: phenotype individual after molecular testing (OMIM abbreviation)
Inheritance
: Indicates the inheritance of the phenotype in the family; unknown, familial (autosomal/X-linked, dominant/ recessive), paternal (Y-linked), maternal (mitochondrial), isolated (sporadic) or complex
All options:
Unknown
Familial
Familial, autosomal dominant
Familial, autosomal recessive
Familial, X-linked
Familial, X-linked dominant
Familial, X-linked dominant, male sparing
Familial, X-linked recessive
Paternal, Y-linked
Maternal, mitochondrial
Isolated (sporadic)
Di-genic
Complex
- = Not applicable
Age/Examination
: age at which the individual was examined.
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Age/Diagnosis
: age diagnosis was confirmed
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Age/Onset
: Age first symptoms disease appeared in individual:
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Phenotype/Onset
: individual's phenotype at Age/Onset described using HPO
Protein
: result from protein staining
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Column type
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Text
Arg
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space
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|
Text
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!
Text
!fs
all entries not containing 'fs'
^
Text
^p.(Arg
all entries beginning with 'p.(Arg'
$
Text
Ser)$
all entries ending with 'Ser)'
=""
Text
=""
all entries with this field empty
=""
Text
="p.0"
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!=""
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!=""
Text
!="p.0"
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combination
Text
*|Ter !fs
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Date
2020
all entries matching the year 2020
|
Date
2020-03|2020-04
all entries matching March or April, 2020
!
Date
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all entries not matching March, 2020
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Date
<2020
all entries before the year 2020
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Date
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all entries in or before June, 2020
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Date
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all entries after June, 2020
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Date
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all entries on or after June 15th, 2020
combination
Date
2019|2020 <2020-03
all entries in 2019 or 2020, and before March, 2020
Numeric
23
all entries exactly matching 23
|
Numeric
23|24
all entries exactly matching 23 or 24
!
Numeric
!23
all entries not exactly matching 23
<
Numeric
<23
all entries lower than 23
<=
Numeric
<=23
all entries lower than, or equal to, 23
>
Numeric
>23
all entries higher than 23
>=
Numeric
>=23
all entries higher than, or equal to, 23
combination
Numeric
>=20 <30 !23
all entries with values from 20 to 29, but not equal to 23
Some more advanced examples:
Example
Matches
Asian
all entries containing 'Asian', 'asian', including 'Caucasian', 'caucasian', etc.
Asian !Caucasian
all entries containing 'Asian' but not containing 'Caucasian'
Asian|African !Caucasian
all entries containing 'Asian' or 'African', but not containing 'Caucasian'
"South Asian"
all entries containing 'South Asian', but not containing 'South East Asian'
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How to query
Phenotype ID
Phenotype details
Diagnosis/Initial
Diagnosis/Definite
Inheritance
Age/Examination
Age/Diagnosis
Age/Onset
Phenotype/Onset
Protein
Owner
Individual ID
0000060793
-
-
-
Familial, autosomal dominant
-
-
-
-
-
Gemeinschaftspraxis für Humangenetik Dresden
00081135
0000081673
brachydactyly
-
-
Isolated (sporadic)
01y
11y
01y
bilateral postaxial polydactyly
-
Arrate Pereda
00103738
0000081674
deformities of the middle phalangeal joints of the III and right IV
-
-
Isolated (sporadic)
05y
11y
-
-
-
Arrate Pereda
00103738
0000081675
short stature (<3rd centile)
-
-
Isolated (sporadic)
06y
11y
01y
-
-
Arrate Pereda
00103738
0000081676
sparse hair (HP:0008070); pear-shaped nose (HP:0000447); long philtrum (HP:0000343); thin vermilion border (HP:0000233); micrognathia (HP:0000347); large prominent ears (HP:0000400); bilateral clinodactyly 3rd & 4th fingers, brachydactyly-E; short big toes; normal calcium homeostasis; delayed bone maturation; no calcification; no intellectual disability; delayed growth; short stature (<3rd centile)
-
-
Isolated (sporadic)
10y07m
11y
01y
bilateral postaxial polydactyly
-
Arrate Pereda
00103738
0000081883
brachydactyly; delayed bone maturation; no calcification; no intellectual disability; postnatal growth retardation; stature, short, mild (HPO_0003502)
-
-
Familial, autosomal dominant
01y01m
01y01m
-
-
-
Guiomar Perez de Nanclares
00103753
0000092376
-
-
-
Unknown
-
-
-
-
-
Gemeinschaftspraxis für Humangenetik Dresden
00116803
0000105987
-
-
-
Familial, autosomal dominant
-
-
-
-
-
Gemeinschaftspraxis für Humangenetik Dresden
00133222
0000106827
cone-shaped epiphysis middle phalanges; ulnar and radius epiphysis hypoplasia; flattened femoral epiphysis; sparse scalp hair; bulbous nose; brachydactyly-E; no delayed bone maturation; no calcification; dysmorphic face; short stature (<3rd centile)
-
-
Isolated (sporadic)
14y
14y
-
-
-
Arrate Pereda
00134069
0000349727
-
-
-
Unknown
-
-
-
-
-
Gemeinschaftspraxis für Humangenetik Dresden
00462227
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