Global Variome shared LOVD
UBTF (upstream binding transcription factor, RNA po...)
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Phenotypes for disease #00779 (OPD2 (otopalatodigital syndrome, type II (OPD-2)), OMIM:304120)
Legend
Please note that a short description of a certain column can be displayed when you move your mouse cursor over the column's header and hold it still. Below, a more detailed description is shown per column.
Phenotype details
: additional information on the phenotype of the individual, preferably use HPO terms only (http://www.human-phenotype-ontology.org/)
Diagnosis/Initial
: initial diagnosis, before molecular testing
Diagnosis/Definite
: phenotype individual after molecular testing (OMIM abbreviation)
Inheritance
: Indicates the inheritance of the phenotype in the family; unknown, familial (autosomal/X-linked, dominant/ recessive), paternal (Y-linked), maternal (mitochondrial), isolated (sporadic) or complex
All options:
Unknown
Familial
Familial, autosomal dominant
Familial, autosomal recessive
Familial, X-linked
Familial, X-linked dominant
Familial, X-linked dominant, male sparing
Familial, X-linked recessive
Paternal, Y-linked
Maternal, mitochondrial
Isolated (sporadic)
Di-genic
Complex
- = Not applicable
Age/Examination
: age at which the individual was examined.
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Age/Diagnosis
: age diagnosis was confirmed
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Age/Onset
: Age first symptoms disease appeared in individual:
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Phenotype/Onset
: individual's phenotype at Age/Onset described using HPO
Protein
: result from protein staining
How to query this table
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Example
Matches
Text
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all entries containing 'Arg'
space
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Text
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Text
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all entries not containing 'fs'
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Text
^p.(Arg
all entries beginning with 'p.(Arg'
$
Text
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all entries ending with 'Ser)'
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Text
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Text
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Text
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combination
Text
*|Ter !fs
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Date
2020
all entries matching the year 2020
|
Date
2020-03|2020-04
all entries matching March or April, 2020
!
Date
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all entries not matching March, 2020
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Date
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all entries before the year 2020
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Date
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all entries in or before June, 2020
>
Date
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all entries after June, 2020
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Date
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all entries on or after June 15th, 2020
combination
Date
2019|2020 <2020-03
all entries in 2019 or 2020, and before March, 2020
Numeric
23
all entries exactly matching 23
|
Numeric
23|24
all entries exactly matching 23 or 24
!
Numeric
!23
all entries not exactly matching 23
<
Numeric
<23
all entries lower than 23
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Numeric
<=23
all entries lower than, or equal to, 23
>
Numeric
>23
all entries higher than 23
>=
Numeric
>=23
all entries higher than, or equal to, 23
combination
Numeric
>=20 <30 !23
all entries with values from 20 to 29, but not equal to 23
Some more advanced examples:
Example
Matches
Asian
all entries containing 'Asian', 'asian', including 'Caucasian', 'caucasian', etc.
Asian !Caucasian
all entries containing 'Asian' but not containing 'Caucasian'
Asian|African !Caucasian
all entries containing 'Asian' or 'African', but not containing 'Caucasian'
"South Asian"
all entries containing 'South Asian', but not containing 'South East Asian'
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20 entries on 1 page. Showing entries 1 - 20.
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Legend
How to query
Phenotype ID
Phenotype details
Diagnosis/Initial
Diagnosis/Definite
Inheritance
Age/Examination
Age/Diagnosis
Age/Onset
Phenotype/Onset
Protein
Owner
Individual ID
0000024746
omphalocele, perinatal death, bowed bones, abnormal digits
-
-
Familial
-
-
-
-
-
Yu Sun
00028707
0000024747
hydrocephalus, omphalocele, perinatal death, bowed bones, abnormal digits, cleft palate
-
-
Familial
-
-
-
-
-
Yu Sun
00028708
0000024748
hydrocephalus, omphalocele, perinatal death, bowed bones, abnormal digits, cleft palate
-
-
Familial
-
-
-
-
-
Yu Sun
00028709
0000024757
cleft palate
-
-
Familial
-
-
-
-
-
Yu Sun
00028729
0000024849
-
-
-
Familial
-
-
-
-
-
Yu Sun
00028833
0000024850
-
-
-
Familial
-
-
-
-
-
Yu Sun
00028834
0000024862
hydrocephalus, short stature, bowed bones, abnormal digits
-
-
Familial
-
-
-
-
-
Yu Sun
00028856
0000024863
short stature, bowed bones, abnormal digits
-
-
Familial
-
-
-
-
-
Yu Sun
00028857
0000024865
perinatal death, short stature, bowed bones, abnormal digits, cleft palate
-
-
Familial
-
-
-
-
-
Yu Sun
00028861
0000024866
hydrocephalus, short stature, bowed bones, abnormal digits, cleft palate
-
-
Familial
-
-
-
-
-
Yu Sun
00028862
0000024923
omphalocele, perinatal death, bowed bones, abnormal digits, cleft palate
-
-
Unknown
-
-
-
-
-
Yu Sun
00028710
0000024930
short stature, bowed bones, abnormal digits, cleft palate
-
-
Unknown
-
-
-
-
-
Yu Sun
00028727
0000024932
perinatal death, short stature, bowed bones, abnormal digits, cleft palate
-
-
Unknown
-
-
-
-
-
Yu Sun
00028730
0000024944
-
-
-
Unknown
-
-
-
-
-
Yu Sun
00028879
0000038111
-
-
-
Familial, X-linked dominant
-
-
-
-
-
Sébastien Moutton
00051523
0000038112
-
-
-
Familial, X-linked dominant
-
-
-
-
-
Sébastien Moutton
00051524
0000038113
-
-
-
Familial, X-linked dominant
-
-
-
-
-
Sébastien Moutton
00051525
0000038114
-
-
-
Familial, X-linked dominant
-
-
-
-
-
Sébastien Moutton
00051526
0000038649
see paper; sagittal sutures affected, broad prominent forehead/brow ridge, no micro/retrognathia, no camptodactyly/arthrogryposis, broad/flattened/spatulateterminal digits; hHypertelorism, cleft palate, ...
-
-
Isolated (sporadic)
-
-
-
-
-
Johan den Dunnen
00027224
0000231956
Bilateral choanal stenosis Intestinal malrotation Bilateral cryptorchidism
-
-
Familial, X-linked
-
-
00y
-
-
Laura Tanner
00306115
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