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Phenotypes for disease #00876 (JBTS14 (Joubert syndrome, type 14 (JBTS-14)), OMIM:614424)
Legend
Please note that a short description of a certain column can be displayed when you move your mouse cursor over the column's header and hold it still. Below, a more detailed description is shown per column.
Phenotype details
: additional information on the phenotype of the individual, preferably use HPO terms only (http://www.human-phenotype-ontology.org/)
Diagnosis/Initial
: initial diagnosis, before molecular testing
Diagnosis/Definite
: phenotype individual after molecular testing (OMIM abbreviation)
Inheritance
: Indicates the inheritance of the phenotype in the family; unknown, familial (autosomal/X-linked, dominant/ recessive), paternal (Y-linked), maternal (mitochondrial), isolated (sporadic) or complex
All options:
Unknown
Familial
Familial, autosomal dominant
Familial, autosomal recessive
Familial, X-linked
Familial, X-linked dominant
Familial, X-linked dominant, male sparing
Familial, X-linked recessive
Paternal, Y-linked
Maternal, mitochondrial
Isolated (sporadic)
Di-genic
Complex
- = Not applicable
Age/Examination
: age at which the individual was examined.
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Age/Diagnosis
: age diagnosis was confirmed
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Age/Onset
: Age first symptoms disease appeared in individual:
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Phenotype/Onset
: individual's phenotype at Age/Onset described using HPO
Protein
: result from protein staining
How to query this table
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Operator
Column type
Example
Matches
Text
Arg
all entries containing 'Arg'
space
Text
Arg Ser
all entries containing 'Arg' and 'Ser'
|
Text
Arg|Ser
all entries containing 'Arg' or 'Ser'
!
Text
!fs
all entries not containing 'fs'
^
Text
^p.(Arg
all entries beginning with 'p.(Arg'
$
Text
Ser)$
all entries ending with 'Ser)'
=""
Text
=""
all entries with this field empty
=""
Text
="p.0"
all entries exactly matching 'p.0'
!=""
Text
!=""
all entries with this field not empty
!=""
Text
!="p.0"
all entries not exactly matching 'p.0?'
combination
Text
*|Ter !fs
all entries containing '*' or 'Ter' but not containing 'fs'
Date
2020
all entries matching the year 2020
|
Date
2020-03|2020-04
all entries matching March or April, 2020
!
Date
!2020-03
all entries not matching March, 2020
<
Date
<2020
all entries before the year 2020
<=
Date
<=2020-06
all entries in or before June, 2020
>
Date
>2020-06
all entries after June, 2020
>=
Date
>=2020-06-15
all entries on or after June 15th, 2020
combination
Date
2019|2020 <2020-03
all entries in 2019 or 2020, and before March, 2020
Numeric
23
all entries exactly matching 23
|
Numeric
23|24
all entries exactly matching 23 or 24
!
Numeric
!23
all entries not exactly matching 23
<
Numeric
<23
all entries lower than 23
<=
Numeric
<=23
all entries lower than, or equal to, 23
>
Numeric
>23
all entries higher than 23
>=
Numeric
>=23
all entries higher than, or equal to, 23
combination
Numeric
>=20 <30 !23
all entries with values from 20 to 29, but not equal to 23
Some more advanced examples:
Example
Matches
Asian
all entries containing 'Asian', 'asian', including 'Caucasian', 'caucasian', etc.
Asian !Caucasian
all entries containing 'Asian' but not containing 'Caucasian'
Asian|African !Caucasian
all entries containing 'Asian' or 'African', but not containing 'Caucasian'
"South Asian"
all entries containing 'South Asian', but not containing 'South East Asian'
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19 entries on 1 page. Showing entries 1 - 19.
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Legend
How to query
Phenotype ID
Phenotype details
Diagnosis/Initial
Diagnosis/Definite
Inheritance
Age/Examination
Age/Diagnosis
Age/Onset
Phenotype/Onset
Protein
Owner
Individual ID
0000092955
encephalocele;cystic kidney;
-
-
Familial, autosomal recessive
02d
-
-
-
-
Lijia Huang
00117485
0000092956
molar tooth sign; posterior fossa abnormality; hydrocephalus; cystic kidney; nystagmus; strabismus; optic atrophy
-
-
Familial, autosomal recessive
08y
-
-
-
-
Lijia Huang
00117486
0000092957
molar tooth sign; posterior fossa abnormality; hydrocephalus; encephalocele; cystic kidney; Nystagmus; strabismus
-
-
Familial, autosomal recessive
07y
-
-
-
-
Lijia Huang
00117487
0000092958
cerebellar vermis hypoplasia; nystagmus; strabismus
-
-
Familial, autosomal recessive
28y
-
-
-
-
Lijia Huang
00117488
0000092959
cerebellar vermis hypoplasia; nystagmus; strabismus
-
-
Familial, autosomal recessive
12y
-
-
-
-
Lijia Huang
00117489
0000092960
molar tooth sign; nystagmus; strabismus; coloboma;intracranial bleed
-
-
Familial, autosomal recessive
12y
-
-
-
-
Lijia Huang
00117490
0000092961
encephalocele; hydrocephalus; cystic kidney; cleft palate
-
-
Familial, autosomal recessive
00d
-
-
-
-
Lijia Huang
00117491
0000092962
hydrocephalus; cystic kidney;postaxial polydactyly
-
-
Familial, autosomal recessive
02d
-
-
-
-
Lijia Huang
00117492
0000092963
molar tooth sign; encephalocele; cystic kidney; nystagmus; strabismus; coloboma; ventricular septal defect
-
-
Familial, autosomal recessive
09y
-
-
-
-
Lijia Huang
00117493
0000092964
encephalocele; hydrocephalus; Dandy-Walker variant; cystic kidney; nystagmus; strabismus
-
-
Familial, autosomal recessive
13m
-
-
-
-
Lijia Huang
00117494
0000092965
molar tooth sign; posterior fossa abnormality; cystic kidney; nystagmus; strabismus
-
-
Familial, autosomal recessive
08y
-
-
-
-
Lijia Huang
00117495
0000092966
molar tooth sign; Dandy-Walker variant; hydrocephalus; encephalocele; cystic kidney
-
-
Familial, autosomal recessive
21d
-
-
-
-
Lijia Huang
00117496
0000092967
molar tooth sign; Dandy-Walker variant; hydrocephalus; encephalocele; cystic kidney; nystagmus
-
-
Familial, autosomal recessive
03m
-
-
-
-
Lijia Huang
00117497
0000092968
molar tooth sign; Dandy-Walker variant; hydrocephalus; cystic kidney; nystagmus
-
-
Familial, autosomal recessive
-
-
-
-
-
Lijia Huang
00117498
0000092969
molar tooth sign; hydrocephalus; posterior fossa abnormality; cortical visual impairment; cystic kidney; nystagmus; strabismus
-
-
Familial, autosomal recessive
04y
-
-
-
-
Lijia Huang
00117499
0000092970
cerebellar vermis aplasia; cystic kidney; morning glory disc anomaly;
-
-
Familial, autosomal recessive
04y
-
-
-
-
Lijia Huang
00117500
0000092971
hydrocephalus; cerebellar vermis aplasia; corpus callosum hypoplasia; meningocele; cystic kidney; morning glory disc anomaly
-
-
Familial, autosomal recessive
-
-
-
-
-
Lijia Huang
00117501
0000092972
cerebellar vermis aplasia; brain stem hypoplasia; cystic kidney; nystagmus; morning glory disc anomaly
-
-
Familial, autosomal recessive
11y
-
-
-
-
Lijia Huang
00117502
0000092974
meningomyelocele; cortical visual impairment
-
-
Familial, autosomal recessive
-
-
-
-
-
Lijia Huang
00117504
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