Global Variome shared LOVD
GLRA1 (glycine receptor, alpha 1)
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Phenotypes for disease #01245 (CMT1B (Charcot-Marie-Tooth disease, type IB (CMT-1B)), OMIM:118200)
Legend
Please note that a short description of a certain column can be displayed when you move your mouse cursor over the column's header and hold it still. Below, a more detailed description is shown per column.
Phenotype details
: additional information on the phenotype of the individual, preferably use HPO terms only (http://www.human-phenotype-ontology.org/)
Diagnosis/Initial
: initial diagnosis, before molecular testing
Diagnosis/Definite
: phenotype individual after molecular testing (OMIM abbreviation)
Inheritance
: Indicates the inheritance of the phenotype in the family; unknown, familial (autosomal/X-linked, dominant/ recessive), paternal (Y-linked), maternal (mitochondrial), isolated (sporadic) or complex
All options:
Unknown
Familial
Familial, autosomal dominant
Familial, autosomal recessive
Familial, X-linked
Familial, X-linked dominant
Familial, X-linked dominant, male sparing
Familial, X-linked recessive
Paternal, Y-linked
Maternal, mitochondrial
Isolated (sporadic)
Di-genic
Complex
- = Not applicable
Age/Examination
: age at which the individual was examined.
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Age/Diagnosis
: age diagnosis was confirmed
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Age/Onset
: Age first symptoms disease appeared in individual:
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Phenotype/Onset
: individual's phenotype at Age/Onset described using HPO
Protein
: result from protein staining
How to query this table
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Operator
Column type
Example
Matches
Text
Arg
all entries containing 'Arg'
space
Text
Arg Ser
all entries containing 'Arg' and 'Ser'
|
Text
Arg|Ser
all entries containing 'Arg' or 'Ser'
!
Text
!fs
all entries not containing 'fs'
^
Text
^p.(Arg
all entries beginning with 'p.(Arg'
$
Text
Ser)$
all entries ending with 'Ser)'
=""
Text
=""
all entries with this field empty
=""
Text
="p.0"
all entries exactly matching 'p.0'
!=""
Text
!=""
all entries with this field not empty
!=""
Text
!="p.0"
all entries not exactly matching 'p.0?'
combination
Text
*|Ter !fs
all entries containing '*' or 'Ter' but not containing 'fs'
Date
2020
all entries matching the year 2020
|
Date
2020-03|2020-04
all entries matching March or April, 2020
!
Date
!2020-03
all entries not matching March, 2020
<
Date
<2020
all entries before the year 2020
<=
Date
<=2020-06
all entries in or before June, 2020
>
Date
>2020-06
all entries after June, 2020
>=
Date
>=2020-06-15
all entries on or after June 15th, 2020
combination
Date
2019|2020 <2020-03
all entries in 2019 or 2020, and before March, 2020
Numeric
23
all entries exactly matching 23
|
Numeric
23|24
all entries exactly matching 23 or 24
!
Numeric
!23
all entries not exactly matching 23
<
Numeric
<23
all entries lower than 23
<=
Numeric
<=23
all entries lower than, or equal to, 23
>
Numeric
>23
all entries higher than 23
>=
Numeric
>=23
all entries higher than, or equal to, 23
combination
Numeric
>=20 <30 !23
all entries with values from 20 to 29, but not equal to 23
Some more advanced examples:
Example
Matches
Asian
all entries containing 'Asian', 'asian', including 'Caucasian', 'caucasian', etc.
Asian !Caucasian
all entries containing 'Asian' but not containing 'Caucasian'
Asian|African !Caucasian
all entries containing 'Asian' or 'African', but not containing 'Caucasian'
"South Asian"
all entries containing 'South Asian', but not containing 'South East Asian'
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44 entries on 1 page. Showing entries 1 - 44.
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Legend
How to query
Phenotype ID
Phenotype details
Diagnosis/Initial
Diagnosis/Definite
Inheritance
Age/Examination
Age/Diagnosis
Age/Onset
Phenotype/Onset
Protein
Owner
Individual ID
0000050214
-
-
-
Unknown
-
-
-
-
-
Johan den Dunnen
00063631
0000050217
-
-
-
Unknown
-
-
-
-
-
Johan den Dunnen
00063634
0000050223
-
-
-
Unknown
-
-
-
-
-
Johan den Dunnen
00063640
0000050228
-
-
-
Unknown
-
-
-
-
-
Johan den Dunnen
00063645
0000050232
-
-
-
Unknown
-
-
-
-
-
Johan den Dunnen
00063649
0000050241
-
-
-
Unknown
-
-
-
-
-
Johan den Dunnen
00063658
0000050244
-
-
-
Unknown
-
-
-
-
-
Johan den Dunnen
00063661
0000050245
-
-
-
Unknown
-
-
-
-
-
Johan den Dunnen
00063662
0000050247
-
-
-
Unknown
-
-
-
-
-
Johan den Dunnen
00063664
0000050253
-
-
-
Unknown
-
-
-
-
-
Johan den Dunnen
00063670
0000050257
-
-
-
Unknown
-
-
-
-
-
Johan den Dunnen
00063674
0000050258
-
-
-
Unknown
-
-
-
-
-
Johan den Dunnen
00063675
0000050260
-
-
-
Unknown
-
-
-
-
-
Johan den Dunnen
00063677
0000050261
-
-
-
Unknown
-
-
-
-
-
Johan den Dunnen
00063678
0000050266
-
-
-
Unknown
-
-
-
-
-
Johan den Dunnen
00063683
0000050268
-
-
-
Unknown
-
-
-
-
-
Johan den Dunnen
00063685
0000050270
-
-
-
Unknown
-
-
-
-
-
Johan den Dunnen
00063687
0000050273
-
-
-
Unknown
-
-
-
-
-
Johan den Dunnen
00063690
0000050274
-
-
-
Unknown
-
-
-
-
-
Johan den Dunnen
00063691
0000050275
-
-
-
Unknown
-
-
-
-
-
Johan den Dunnen
00063692
0000050276
-
-
-
Unknown
-
-
-
-
-
Johan den Dunnen
00063693
0000050279
-
-
-
Unknown
-
-
-
-
-
Johan den Dunnen
00063696
0000050280
-
-
-
Unknown
-
-
-
-
-
Johan den Dunnen
00063697
0000050282
-
-
-
Unknown
-
-
-
-
-
Johan den Dunnen
00063699
0000050284
-
-
-
Unknown
-
-
-
-
-
Johan den Dunnen
00063701
0000050295
-
-
-
Unknown
-
-
-
-
-
Johan den Dunnen
00063712
0000050305
-
-
-
Unknown
-
-
-
-
-
Johan den Dunnen
00063722
0000050308
-
-
-
Unknown
-
-
-
-
-
Johan den Dunnen
00063725
0000050313
-
-
-
Unknown
-
-
-
-
-
Johan den Dunnen
00063730
0000050317
-
-
-
Unknown
-
-
-
-
-
Johan den Dunnen
00063734
0000050318
-
-
-
Unknown
-
-
-
-
-
Johan den Dunnen
00063735
0000050320
-
-
-
Unknown
-
-
-
-
-
Johan den Dunnen
00063737
0000050328
-
-
-
Unknown
-
-
-
-
-
Johan den Dunnen
00063745
0000050330
-
-
-
Unknown
-
-
-
-
-
Johan den Dunnen
00063747
0000050332
-
-
-
Unknown
-
-
-
-
-
Johan den Dunnen
00063749
0000050335
-
-
-
Unknown
-
-
-
-
-
Johan den Dunnen
00063752
0000050336
-
-
-
Unknown
-
-
-
-
-
Johan den Dunnen
00063753
0000050344
-
-
-
Unknown
-
-
-
-
-
Johan den Dunnen
00063761
0000050345
-
-
-
Unknown
-
-
-
-
-
Johan den Dunnen
00063762
0000050351
-
-
-
Unknown
-
-
-
-
-
Johan den Dunnen
00063768
0000050352
-
-
-
Unknown
-
-
-
-
-
Johan den Dunnen
00063769
0000050358
-
-
-
Unknown
-
-
-
-
-
Johan den Dunnen
00063775
0000050359
-
-
-
Unknown
-
-
-
-
-
Johan den Dunnen
00063776
0000050363
-
-
-
Unknown
-
-
-
-
-
Johan den Dunnen
00063780
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