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Phenotypes for disease #01676 (IMD27A (immunodeficiency, type 27A, mycobacteriosis, AR (IMD-27A)), OMIM:209950)
Legend
Please note that a short description of a certain column can be displayed when you move your mouse cursor over the column's header and hold it still. Below, a more detailed description is shown per column.
Phenotype details
: additional information on the phenotype of the individual, preferably use HPO terms only (http://www.human-phenotype-ontology.org/)
Diagnosis/Initial
: initial diagnosis, before molecular testing
Diagnosis/Definite
: phenotype individual after molecular testing (OMIM abbreviation)
Inheritance
: Indicates the inheritance of the phenotype in the family; unknown, familial (autosomal/X-linked, dominant/ recessive), paternal (Y-linked), maternal (mitochondrial), isolated (sporadic) or complex
All options:
Unknown
Familial
Familial, autosomal dominant
Familial, autosomal recessive
Familial, X-linked
Familial, X-linked dominant
Familial, X-linked dominant, male sparing
Familial, X-linked recessive
Paternal, Y-linked
Maternal, mitochondrial
Isolated (sporadic)
Di-genic
Complex
- = Not applicable
Age/Examination
: age at which the individual was examined.
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Age/Diagnosis
: age diagnosis was confirmed
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Age/Onset
: Age first symptoms disease appeared in individual:
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Phenotype/Onset
: individual's phenotype at Age/Onset described using HPO
Protein
: result from protein staining
How to query this table
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Operator
Column type
Example
Matches
Text
Arg
all entries containing 'Arg'
space
Text
Arg Ser
all entries containing 'Arg' and 'Ser'
|
Text
Arg|Ser
all entries containing 'Arg' or 'Ser'
!
Text
!fs
all entries not containing 'fs'
^
Text
^p.(Arg
all entries beginning with 'p.(Arg'
$
Text
Ser)$
all entries ending with 'Ser)'
=""
Text
=""
all entries with this field empty
=""
Text
="p.0"
all entries exactly matching 'p.0'
!=""
Text
!=""
all entries with this field not empty
!=""
Text
!="p.0"
all entries not exactly matching 'p.0?'
combination
Text
*|Ter !fs
all entries containing '*' or 'Ter' but not containing 'fs'
Date
2020
all entries matching the year 2020
|
Date
2020-03|2020-04
all entries matching March or April, 2020
!
Date
!2020-03
all entries not matching March, 2020
<
Date
<2020
all entries before the year 2020
<=
Date
<=2020-06
all entries in or before June, 2020
>
Date
>2020-06
all entries after June, 2020
>=
Date
>=2020-06-15
all entries on or after June 15th, 2020
combination
Date
2019|2020 <2020-03
all entries in 2019 or 2020, and before March, 2020
Numeric
23
all entries exactly matching 23
|
Numeric
23|24
all entries exactly matching 23 or 24
!
Numeric
!23
all entries not exactly matching 23
<
Numeric
<23
all entries lower than 23
<=
Numeric
<=23
all entries lower than, or equal to, 23
>
Numeric
>23
all entries higher than 23
>=
Numeric
>=23
all entries higher than, or equal to, 23
combination
Numeric
>=20 <30 !23
all entries with values from 20 to 29, but not equal to 23
Some more advanced examples:
Example
Matches
Asian
all entries containing 'Asian', 'asian', including 'Caucasian', 'caucasian', etc.
Asian !Caucasian
all entries containing 'Asian' but not containing 'Caucasian'
Asian|African !Caucasian
all entries containing 'Asian' or 'African', but not containing 'Caucasian'
"South Asian"
all entries containing 'South Asian', but not containing 'South East Asian'
To sort on a certain column, click on the column header or on the arrows. If that column is already selected to sort on, the sort order will be swapped. The column currently sorted on has a darker blue background color than the other columns. The up and down arrows next to the column name indicate the current sorting direction. When sorting on any field other than the default, LOVD will sort secondarily on the default sort column.
47 entries on 1 page. Showing entries 1 - 47.
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Legend
How to query
Phenotype ID
Phenotype details
Diagnosis/Initial
Diagnosis/Definite
Inheritance
Age/Examination
Age/Diagnosis
Age/Onset
Phenotype/Onset
Protein
Owner
Individual ID
0000199243
MSMD
-
-
Familial, autosomal recessive
-
-
-
-
-
LOVD
00260710
0000199244
-
-
-
Familial, autosomal recessive
-
-
-
-
-
LOVD
00260711
0000199245
B cell lymphoma
-
-
Familial, autosomal recessive
-
-
-
-
-
LOVD
00260713
0000199246
-
-
-
Familial, autosomal recessive
-
-
-
-
-
LOVD
00260714
0000199247
-
-
-
Familial, autosomal recessive
-
-
-
-
-
LOVD
00260715
0000199248
-
-
-
Familial, autosomal recessive
-
-
-
-
-
LOVD
00260716
0000199249
-
-
-
Familial, autosomal recessive
-
-
-
-
-
LOVD
00260718
0000199250
-
-
-
Familial, autosomal recessive
-
-
-
-
-
LOVD
00260719
0000199251
-
-
-
Familial, autosomal recessive
-
-
-
-
-
LOVD
00260720
0000199252
-
-
-
Familial, autosomal recessive
-
-
-
-
-
LOVD
00260721
0000199253
-
-
-
Familial, autosomal recessive
-
-
-
-
-
LOVD
00260723
0000199254
-
-
-
Familial, autosomal recessive
-
-
-
-
-
LOVD
00260724
0000199255
-
-
-
Familial, autosomal recessive
-
-
-
-
-
LOVD
00260725
0000199256
-
-
-
Familial, autosomal recessive
-
-
-
-
-
LOVD
00260726
0000199257
-
-
-
Familial, autosomal recessive
-
-
-
-
-
LOVD
00260727
0000199258
-
-
-
Familial, autosomal recessive
-
-
-
-
-
LOVD
00260728
0000199259
-
-
-
Familial, autosomal recessive
-
-
-
-
-
LOVD
00260729
0000199260
-
-
-
Familial, autosomal recessive
-
-
-
-
-
LOVD
00260730
0000199261
-
-
-
Familial, autosomal recessive
-
-
-
-
-
LOVD
00260731
0000199262
-
-
-
Familial, autosomal recessive
-
-
-
-
-
LOVD
00260732
0000199263
-
-
-
Familial, autosomal recessive
-
-
-
-
-
LOVD
00260733
0000199264
-
-
-
Familial, autosomal recessive
-
-
-
-
-
LOVD
00260734
0000199265
-
-
-
Familial, autosomal recessive
-
-
-
-
-
LOVD
00260735
0000199266
-
-
-
Familial, autosomal recessive
-
-
-
-
-
LOVD
00260736
0000199267
-
-
-
Familial, autosomal recessive
-
-
-
-
-
LOVD
00260737
0000199268
-
-
-
Familial, autosomal recessive
-
-
-
-
-
LOVD
00260738
0000199269
-
-
-
Familial, autosomal recessive
-
-
-
-
-
LOVD
00260739
0000199270
living in France
-
-
Familial, autosomal recessive
-
-
-
-
-
LOVD
00260740
0000199271
-
-
-
Familial, autosomal recessive
-
-
-
-
-
LOVD
00260741
0000199272
-
-
-
Familial, autosomal recessive
-
-
-
-
-
LOVD
00260742
0000199273
-
-
-
Familial, autosomal recessive
-
-
-
-
-
LOVD
00260743
0000199274
-
-
-
Familial, autosomal recessive
-
-
-
-
-
LOVD
00260744
0000199275
NTM infections and B cell lymphoma
-
-
Familial, autosomal recessive
-
-
-
-
-
LOVD
00260745
0000199276
-
-
-
Familial, autosomal recessive
-
-
-
-
-
LOVD
00260746
0000199278
-
-
-
Familial, autosomal recessive
-
-
-
-
-
LOVD
00260748
0000199279
-
-
-
Familial, autosomal recessive
-
-
-
-
-
LOVD
00260749
0000199280
-
-
-
Familial, autosomal recessive
-
-
-
-
-
LOVD
00260751
0000199281
M.scrofulaceum multifocal osteomyelitis. intracranial tumour (pineal germinoma)
-
-
Familial, autosomal recessive
-
-
2y10m
-
-
LOVD
00260752
0000199282
Salmonella gastroenteritis; disseminated M.fortuitum, Influenza A
-
-
Familial, autosomal recessive
-
-
-
-
-
LOVD
00260753
0000199283
-
-
-
Familial, autosomal recessive
-
-
-
-
-
LOVD
00260754
0000199284
-
-
-
Familial, autosomal recessive
-
-
-
-
-
LOVD
00260755
0000199286
EBV and disseminated M.tuberculosis
HLH
-
Familial, autosomal recessive
-
-
-
-
-
LOVD
00260757
0000199287
-
-
-
Familial, autosomal recessive
-
-
-
-
-
LOVD
00260759
0000199289
-
-
-
Familial, autosomal recessive
-
-
-
-
-
LOVD
00260762
0000199293
-
-
-
Familial, autosomal recessive
-
-
-
-
-
LOVD
00260717
0000199294
-
-
-
Familial, autosomal recessive
-
-
-
-
-
LOVD
00260722
0000242749
-
-
-
Familial, autosomal recessive
-
-
00y04m
-
-
Esther van de Vosse
00324168
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Legend
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