Global Variome shared LOVD
TGFB3 (transforming growth factor, beta 3)
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Curator:
Paul van der Zwaag
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Phenotypes for disease #01699 (IBGC1 (calcification, basal ganglia, idiopathic, type 1 (IBGC-1, Fahr's syndrome)), OMIM:213600)
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Please note that a short description of a certain column can be displayed when you move your mouse cursor over the column's header and hold it still. Below, a more detailed description is shown per column.
Phenotype details
: additional information on the phenotype of the individual, preferably use HPO terms only (http://www.human-phenotype-ontology.org/)
Diagnosis/Initial
: initial diagnosis, before molecular testing
Diagnosis/Definite
: phenotype individual after molecular testing (OMIM abbreviation)
Inheritance
: Indicates the inheritance of the phenotype in the family; unknown, familial (autosomal/X-linked, dominant/ recessive), paternal (Y-linked), maternal (mitochondrial), isolated (sporadic) or complex
All options:
Unknown
Familial
Familial, autosomal dominant
Familial, autosomal recessive
Familial, X-linked
Familial, X-linked dominant
Familial, X-linked dominant, male sparing
Familial, X-linked recessive
Paternal, Y-linked
Maternal, mitochondrial
Isolated (sporadic)
Di-genic
Complex
- = Not applicable
Age/Examination
: age at which the individual was examined.
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Age/Diagnosis
: age diagnosis was confirmed
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Age/Onset
: Age first symptoms disease appeared in individual:
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Phenotype/Onset
: individual's phenotype at Age/Onset described using HPO
Protein
: result from protein staining
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all entries beginning with 'p.(Arg'
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Date
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Date
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Date
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Date
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Date
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Date
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all entries on or after June 15th, 2020
combination
Date
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all entries in 2019 or 2020, and before March, 2020
Numeric
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all entries exactly matching 23
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Numeric
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all entries exactly matching 23 or 24
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Numeric
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all entries not exactly matching 23
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Numeric
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all entries lower than 23
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Numeric
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all entries lower than, or equal to, 23
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Numeric
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Numeric
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combination
Numeric
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all entries with values from 20 to 29, but not equal to 23
Some more advanced examples:
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Matches
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all entries containing 'Asian', 'asian', including 'Caucasian', 'caucasian', etc.
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all entries containing 'Asian' but not containing 'Caucasian'
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all entries containing 'South Asian', but not containing 'South East Asian'
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25 entries on 1 page. Showing entries 1 - 25.
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How to query
Phenotype ID
Phenotype details
Diagnosis/Initial
Diagnosis/Definite
Inheritance
Age/Examination
Age/Diagnosis
Age/Onset
Phenotype/Onset
Protein
Owner
Individual ID
0000045425
-
-
-
Unknown
-
-
-
-
-
Johan den Dunnen
00058839
0000045426
-
-
-
Unknown
-
-
-
-
-
Johan den Dunnen
00058838
0000045427
-
-
-
Unknown
-
-
-
-
-
Johan den Dunnen
00058837
0000144744
brain calcifications
-
-
Unknown
-
-
-
-
-
Wanjin Chen
00184614
0000144745
brain calcification, TIA
-
-
Unknown
-
-
-
-
-
Wanjin Chen
00184615
0000144746
brain calcification, dreaminess
-
-
Unknown
-
-
-
-
-
Wanjin Chen
00184616
0000144747
brain calcification, chronic headache
-
-
Familial, autosomal dominant
-
-
-
-
-
Wanjin Chen
00184617
0000144748
brain calcification
-
-
Unknown
-
-
-
-
-
Wanjin Chen
00184618
0000144749
brain calcifications, Vertigo
-
-
Unknown
-
-
-
-
-
Wanjin Chen
00184619
0000144750
brain calcifications, chronic headache
-
-
Unknown
-
-
-
-
-
Wanjin Chen
00184620
0000144751
brain calcifications
-
-
Unknown
-
-
-
-
-
Wanjin Chen
00184621
0000144752
brain calcifications
-
-
Familial, autosomal dominant
-
-
-
-
-
Wanjin Chen
00184622
0000144753
brain calcifications
-
-
Unknown
-
-
-
-
-
Wanjin Chen
00184623
0000144754
brain calcifications, numbness of limbs
-
-
Unknown
-
-
-
-
-
Wanjin Chen
00184624
0000144755
brain calcifications
-
-
Unknown
-
-
-
-
-
Wanjin Chen
00184625
0000144756
brain calcifications
-
-
Unknown
-
-
-
-
-
Wanjin Chen
00184626
0000144757
brain calcifications, hypomnesia
-
-
Unknown
-
-
-
-
-
Wanjin Chen
00184627
0000144758
brain calcifications
-
-
Unknown
-
-
-
-
-
Wanjin Chen
00184628
0000144759
brain calcifications
-
-
Familial, autosomal dominant
-
-
-
-
-
Wanjin Chen
00184629
0000144760
brain calcifications
-
-
Familial, autosomal dominant
-
-
-
-
-
Wanjin Chen
00184630
0000167948
brain calcifications
-
-
Familial, autosomal dominant
-
-
-
-
-
Wanjin Chen
00222747
0000167949
brain calcifications
-
-
Familial, autosomal dominant
-
-
-
-
-
Wanjin Chen
00222748
0000167954
brain calcifications
-
-
Familial, autosomal dominant
-
-
-
-
-
Wanjin Chen
00222752
0000232905
HP:0000709, HP:0001260, HP:0002312, HP:0002514
IBGC-1
IBGC-1
Familial, autosomal recessive
20y
55y
20y
-
-
A. Arteche-López
00307086
0000301673
best corrected visual acuity: 1; electroretinogram , rod: n.a., cone: n.a.
-
dystrophy, corneoretinal, crystalline, Bietti (BCD)
Familial, autosomal recessive
56y
-
55y
-
-
LOVD
00409556
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