Global Variome shared LOVD
ARHGEF26 (Rho guanine nucleotide exchange factor ...))
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Phenotypes for disease #01811 (GO (geroderma osteodysplasticum), OMIM:231070)
Legend
Please note that a short description of a certain column can be displayed when you move your mouse cursor over the column's header and hold it still. Below, a more detailed description is shown per column.
Phenotype details
: additional information on the phenotype of the individual, preferably use HPO terms only (http://www.human-phenotype-ontology.org/)
Diagnosis/Initial
: initial diagnosis, before molecular testing
Diagnosis/Definite
: phenotype individual after molecular testing (OMIM abbreviation)
Inheritance
: Indicates the inheritance of the phenotype in the family; unknown, familial (autosomal/X-linked, dominant/ recessive), paternal (Y-linked), maternal (mitochondrial), isolated (sporadic) or complex
All options:
Unknown
Familial
Familial, autosomal dominant
Familial, autosomal recessive
Familial, X-linked
Familial, X-linked dominant
Familial, X-linked dominant, male sparing
Familial, X-linked recessive
Paternal, Y-linked
Maternal, mitochondrial
Isolated (sporadic)
Di-genic
Complex
- = Not applicable
Age/Examination
: age at which the individual was examined.
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Age/Diagnosis
: age diagnosis was confirmed
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Age/Onset
: Age first symptoms disease appeared in individual:
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Phenotype/Onset
: individual's phenotype at Age/Onset described using HPO
Protein
: result from protein staining
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Matches
Text
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Text
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Text
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all entries beginning with 'p.(Arg'
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all entries ending with 'Ser)'
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combination
Text
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Date
2020
all entries matching the year 2020
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Date
2020-03|2020-04
all entries matching March or April, 2020
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Date
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all entries not matching March, 2020
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Date
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all entries before the year 2020
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Date
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all entries in or before June, 2020
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Date
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all entries after June, 2020
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Date
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all entries on or after June 15th, 2020
combination
Date
2019|2020 <2020-03
all entries in 2019 or 2020, and before March, 2020
Numeric
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all entries exactly matching 23
|
Numeric
23|24
all entries exactly matching 23 or 24
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Numeric
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all entries not exactly matching 23
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Numeric
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all entries lower than 23
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Numeric
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all entries lower than, or equal to, 23
>
Numeric
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all entries higher than 23
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Numeric
>=23
all entries higher than, or equal to, 23
combination
Numeric
>=20 <30 !23
all entries with values from 20 to 29, but not equal to 23
Some more advanced examples:
Example
Matches
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all entries containing 'Asian', 'asian', including 'Caucasian', 'caucasian', etc.
Asian !Caucasian
all entries containing 'Asian' but not containing 'Caucasian'
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all entries containing 'Asian' or 'African', but not containing 'Caucasian'
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all entries containing 'South Asian', but not containing 'South East Asian'
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Legend
How to query
Phenotype ID
Phenotype details
Diagnosis/Initial
Diagnosis/Definite
Inheritance
Age/Examination
Age/Diagnosis
Age/Onset
Phenotype/Onset
Protein
Owner
Individual ID
0000325162
wrinkly skin, osteoporosis, reduced bone mineral density, no intellectual disability
gerodermia osteodysplastica
GO
Familial, autosomal recessive
-
-
-
-
-
Johan den Dunnen
00434915
0000325163
wrinkly skin, osteoporosis, reduced bone mineral density, no intellectual disability
gerodermia osteodysplastica
GO
Familial, autosomal recessive
-
-
-
-
-
Johan den Dunnen
00434916
0000325164
wrinkly skin, osteoporosis, reduced bone mineral density, no intellectual disability
gerodermia osteodysplastica
GO
Familial, autosomal recessive
-
-
-
-
-
Johan den Dunnen
00434917
0000325165
wrinkly skin, osteoporosis, reduced bone mineral density, no intellectual disability
gerodermia osteodysplastica
GO
Familial, autosomal recessive
-
-
-
-
-
Johan den Dunnen
00434918
0000325166
wrinkly skin, osteoporosis, reduced bone mineral density, no intellectual disability
gerodermia osteodysplastica
GO
Familial, autosomal recessive
-
-
-
-
-
Johan den Dunnen
00434919
0000325167
wrinkly skin, osteoporosis, reduced bone mineral density, no intellectual disability
gerodermia osteodysplastica
GO
Familial, autosomal recessive
-
-
-
-
-
Johan den Dunnen
00434920
0000325168
wrinkly skin, osteoporosis, reduced bone mineral density, no intellectual disability
gerodermia osteodysplastica
GO
Familial, autosomal recessive
-
-
-
-
-
Johan den Dunnen
00434921
0000325169
wrinkly skin, osteoporosis, reduced bone mineral density, no intellectual disability
gerodermia osteodysplastica
GO
Familial, autosomal recessive
-
-
-
-
-
Johan den Dunnen
00434922
0000325170
wrinkly skin, osteoporosis, reduced bone mineral density, no intellectual disability
gerodermia osteodysplastica
GO
Familial, autosomal recessive
-
-
-
-
-
Johan den Dunnen
00434923
0000325171
wrinkly skin, osteoporosis, reduced bone mineral density, no intellectual disability
gerodermia osteodysplastica
GO
Familial, autosomal recessive
-
-
-
-
-
Johan den Dunnen
00434924
0000325172
wrinkly skin, osteoporosis, reduced bone mineral density, no intellectual disability
gerodermia osteodysplastica
GO
Familial, autosomal recessive
-
-
-
-
-
Johan den Dunnen
00434925
0000325173
wrinkly skin, osteoporosis, reduced bone mineral density, no intellectual disability
gerodermia osteodysplastica
GO
Familial, autosomal recessive
-
-
-
-
-
Johan den Dunnen
00434926
0000325174
wrinkly skin, osteoporosis, reduced bone mineral density, no intellectual disability
gerodermia osteodysplastica
GO
Familial, autosomal recessive
-
-
-
-
-
Johan den Dunnen
00434927
0000325230
typical facial features (senile appearance, droopy cheeks, downturned mouth corners, malar hypoplasia, prognathism, large protruded ears), reduced skin elasticity (decreased recoil, wrinkling on dorsum hands/abdomen when assuming sitting position), radiology normal bone density; congenital dislocation hip
geroderma osteodysplastica
GO
Familial, autosomal recessive
05y
-
-
-
-
Johan den Dunnen
00434983
0000325231
typical facial features (senile appearance, droopy cheeks, downturned mouth corners, malar hypoplasia, prognathism, large protruded ears), reduced skin elasticity (decreased recoil, wrinkling on dorsum hands/abdomen when assuming sitting position), reduced bone density; radiology kyphoscoliosis, cod-fish vertebrae, low Z score; recurrent fractures
geroderma osteodysplastica
GO
Familial, autosomal recessive
14y
-
-
-
-
Johan den Dunnen
00434984
0000325232
typical facial features (senile appearance, droopy cheeks, downturned mouth corners, malar hypoplasia, prognathism, large protruded ears), reduced skin elasticity (decreased recoil, wrinkling on dorsum hands/abdomen when assuming sitting position), radiology minimally reduced bone density; one fracture, delayed closure of anterior fontanelle
geroderma osteodysplastica
GO
Familial, autosomal recessive
05y
-
-
-
-
Johan den Dunnen
00434985
0000325233
typical facial features (senile appearance, droopy cheeks, downturned mouth corners, malar hypoplasia, prognathism, large protruded ears), reduced skin elasticity (decreased recoil, wrinkling on dorsum hands/abdomen when assuming sitting position); short stature; radiology minimal reduction in bone density
geroderma osteodysplastica
GO
Familial, autosomal recessive
11y
-
-
-
-
Johan den Dunnen
00434986
0000325234
typical facial features (senile appearance, droopy cheeks, downturned mouth corners, malar hypoplasia, prognathism, large protruded ears), reduced skin elasticity (decreased recoil, wrinkling on dorsum hands/abdomen when assuming sitting position); congenital dislocation hip, recurrent fractures; radiology low Z score, abnormal cephalometric measurements
geroderma osteodysplastica
GO
Familial, autosomal recessive
10y
-
-
-
-
Johan den Dunnen
00434987
0000325235
typical facial features (senile appearance, droopy cheeks, downturned mouth corners, malar hypoplasia, prognathism, large protruded ears), reduced skin elasticity (decreased recoil, wrinkling on dorsum hands/abdomen when assuming sitting position); recurrent fracture; radiology low Z score, abnormal cephalometric measurements
geroderma osteodysplastica
GO
Familial, autosomal recessive
15y
-
-
-
-
Johan den Dunnen
00434988
0000325236
typical facial features (senile appearance, droopy cheeks, downturned mouth corners, malar hypoplasia, prognathism, large protruded ears), reduced skin elasticity (decreased recoil, wrinkling on dorsum hands/abdomen when assuming sitting position); fractures in childhood; radiology reduced bone density
geroderma osteodysplastica
GO
Familial, autosomal recessive
26y
-
-
-
-
Johan den Dunnen
00434989
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