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Phenotypes for disease #02516 (LCA5 (Leber congenital amaurosis, type 5 (LCA-5)), OMIM:604537)
Legend
Please note that a short description of a certain column can be displayed when you move your mouse cursor over the column's header and hold it still. Below, a more detailed description is shown per column.
Phenotype details
: additional information on the phenotype of the individual, preferably use HPO terms only (http://www.human-phenotype-ontology.org/)
Diagnosis/Initial
: initial diagnosis, before molecular testing
Diagnosis/Definite
: phenotype individual after molecular testing (OMIM abbreviation)
Inheritance
: Indicates the inheritance of the phenotype in the family; unknown, familial (autosomal/X-linked, dominant/ recessive), paternal (Y-linked), maternal (mitochondrial), isolated (sporadic) or complex
All options:
Unknown
Familial
Familial, autosomal dominant
Familial, autosomal recessive
Familial, X-linked
Familial, X-linked dominant
Familial, X-linked dominant, male sparing
Familial, X-linked recessive
Paternal, Y-linked
Maternal, mitochondrial
Isolated (sporadic)
Di-genic
Complex
- = Not applicable
Age/Examination
: age at which the individual was examined.
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Age/Diagnosis
: age diagnosis was confirmed
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Age/Onset
: Age first symptoms disease appeared in individual:
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Phenotype/Onset
: individual's phenotype at Age/Onset described using HPO
Protein
: result from protein staining
How to query this table
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Operator
Column type
Example
Matches
Text
Arg
all entries containing 'Arg'
space
Text
Arg Ser
all entries containing 'Arg' and 'Ser'
|
Text
Arg|Ser
all entries containing 'Arg' or 'Ser'
!
Text
!fs
all entries not containing 'fs'
^
Text
^p.(Arg
all entries beginning with 'p.(Arg'
$
Text
Ser)$
all entries ending with 'Ser)'
=""
Text
=""
all entries with this field empty
=""
Text
="p.0"
all entries exactly matching 'p.0'
!=""
Text
!=""
all entries with this field not empty
!=""
Text
!="p.0"
all entries not exactly matching 'p.0?'
combination
Text
*|Ter !fs
all entries containing '*' or 'Ter' but not containing 'fs'
Date
2020
all entries matching the year 2020
|
Date
2020-03|2020-04
all entries matching March or April, 2020
!
Date
!2020-03
all entries not matching March, 2020
<
Date
<2020
all entries before the year 2020
<=
Date
<=2020-06
all entries in or before June, 2020
>
Date
>2020-06
all entries after June, 2020
>=
Date
>=2020-06-15
all entries on or after June 15th, 2020
combination
Date
2019|2020 <2020-03
all entries in 2019 or 2020, and before March, 2020
Numeric
23
all entries exactly matching 23
|
Numeric
23|24
all entries exactly matching 23 or 24
!
Numeric
!23
all entries not exactly matching 23
<
Numeric
<23
all entries lower than 23
<=
Numeric
<=23
all entries lower than, or equal to, 23
>
Numeric
>23
all entries higher than 23
>=
Numeric
>=23
all entries higher than, or equal to, 23
combination
Numeric
>=20 <30 !23
all entries with values from 20 to 29, but not equal to 23
Some more advanced examples:
Example
Matches
Asian
all entries containing 'Asian', 'asian', including 'Caucasian', 'caucasian', etc.
Asian !Caucasian
all entries containing 'Asian' but not containing 'Caucasian'
Asian|African !Caucasian
all entries containing 'Asian' or 'African', but not containing 'Caucasian'
"South Asian"
all entries containing 'South Asian', but not containing 'South East Asian'
To sort on a certain column, click on the column header or on the arrows. If that column is already selected to sort on, the sort order will be swapped. The column currently sorted on has a darker blue background color than the other columns. The up and down arrows next to the column name indicate the current sorting direction. When sorting on any field other than the default, LOVD will sort secondarily on the default sort column.
63 entries on 1 page. Showing entries 1 - 63.
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Legend
How to query
Phenotype ID
Phenotype details
Diagnosis/Initial
Diagnosis/Definite
Inheritance
Age/Examination
Age/Diagnosis
Age/Onset
Phenotype/Onset
Protein
Owner
Individual ID
0000046327
-
-
-
Familial
-
-
-
-
-
Frans Cremers
00059835
0000046328
-
-
-
Familial
-
-
-
-
-
Frans Cremers
00059836
0000046329
-
-
-
Familial
-
-
-
-
-
Frans Cremers
00059837
0000046330
-
-
-
Familial
-
-
-
-
-
Frans Cremers
00059838
0000046331
-
-
-
Familial
-
-
-
-
-
Frans Cremers
00059839
0000046332
-
-
-
Familial
-
-
-
-
-
Frans Cremers
00059840
0000046333
-
-
-
Familial
-
-
-
-
-
Frans Cremers
00059841
0000046334
-
-
-
Familial
-
-
-
-
-
Frans Cremers
00059842
0000046335
-
-
-
Familial
-
-
-
-
-
Frans Cremers
00059843
0000046336
-
-
-
Familial
-
-
-
-
-
Frans Cremers
00059844
0000046337
-
-
-
Familial
-
-
-
-
-
Frans Cremers
00059845
0000046338
-
-
-
Familial, autosomal recessive
-
-
-
-
-
Frans Cremers
00059846
0000046339
-
-
-
Familial
-
-
-
-
-
Frans Cremers
00059847
0000046340
-
-
-
Familial
-
-
-
-
-
Frans Cremers
00059848
0000046341
-
-
-
Familial
-
-
-
-
-
Frans Cremers
00059849
0000046342
-
-
-
Familial
-
-
-
-
-
Frans Cremers
00059850
0000046343
-
-
-
Familial
-
-
-
-
-
Frans Cremers
00059851
0000046344
-
-
-
Familial
-
-
-
-
-
Frans Cremers
00059852
0000046345
-
-
-
Familial
-
-
-
-
-
Frans Cremers
00059853
0000046346
-
-
-
Familial
-
-
-
-
-
Frans Cremers
00059854
0000046347
-
-
-
Familial
-
-
-
-
-
Frans Cremers
00059855
0000046348
-
-
-
Familial
-
-
-
-
-
Frans Cremers
00059856
0000046349
-
-
-
Familial
-
-
-
-
-
Frans Cremers
00059857
0000046350
-
-
-
Familial
-
-
-
-
-
Frans Cremers
00059858
0000046351
-
-
-
Familial
-
-
-
-
-
Frans Cremers
00059859
0000046352
-
-
-
Familial
-
-
-
-
-
Frans Cremers
00059860
0000046353
-
-
-
Familial
-
-
-
-
-
Frans Cremers
00059861
0000046354
-
-
-
Familial, autosomal recessive
-
-
-
-
-
Frans Cremers
00059862
0000046355
-
-
-
Familial, autosomal recessive
-
-
-
-
-
Frans Cremers
00059863
0000046356
-
-
-
Unknown
-
-
-
-
-
Frans Cremers
00059864
0000046358
-
-
-
Unknown
-
-
-
-
-
Frans Cremers
00059866
0000046359
-
-
-
Familial, autosomal recessive
-
-
-
-
-
Frans Cremers
00059867
0000046360
-
-
-
Familial, autosomal recessive
-
-
-
-
-
Frans Cremers
00059868
0000046361
-
-
-
Familial, autosomal recessive
-
-
-
-
-
Frans Cremers
00059869
0000046362
-
-
-
Familial, autosomal recessive
-
-
-
-
-
Frans Cremers
00059870
0000046363
-
-
-
Familial, autosomal recessive
-
-
-
-
-
Frans Cremers
00059871
0000046364
-
-
-
Unknown
-
-
-
-
-
Frans Cremers
00059872
0000046365
-
-
-
Unknown
-
-
3m
-
-
Frans Cremers
00059873
0000046366
-
-
-
Unknown
-
-
>2m
-
-
Frans Cremers
00059874
0000046367
-
-
-
Unknown
-
-
0m
-
-
Frans Cremers
00059875
0000046368
-
-
-
Unknown
-
-
0m
-
-
Frans Cremers
00059876
0000046369
-
-
-
Unknown
-
-
0m
-
-
Frans Cremers
00059877
0000046371
-
-
-
Unknown
-
-
0m
-
-
Frans Cremers
00059879
0000046372
-
-
-
Unknown
-
-
0m
-
-
Frans Cremers
00059880
0000046373
-
-
-
Isolated (sporadic)
-
-
-
-
-
Frans Cremers
00059881
0000046374
-
-
-
Isolated (sporadic)
-
-
-
-
-
Frans Cremers
00059882
0000046647
-
-
-
Unknown
-
-
-
-
-
Frans Cremers
00060157
0000046648
-
-
-
Unknown
-
-
-
-
-
Frans Cremers
00060158
0000046649
-
-
-
Unknown
-
-
-
-
-
Frans Cremers
00060159
0000046650
-
-
-
Unknown
-
-
-
-
-
Frans Cremers
00060160
0000046651
-
-
-
Familial, autosomal recessive
-
-
-
-
-
Frans Cremers
00060161
0000046652
-
-
-
Familial, autosomal recessive
-
-
-
-
-
Frans Cremers
00060162
0000046653
-
-
-
Unknown
-
-
-
-
-
Frans Cremers
00060163
0000046654
-
-
-
Unknown
-
-
-
-
-
Frans Cremers
00060164
0000046655
-
-
-
Unknown
-
-
-
-
-
Frans Cremers
00060165
0000046656
-
-
-
Unknown
-
-
-
-
-
Frans Cremers
00060166
0000046657
-
-
-
Unknown
-
-
0m
-
-
Frans Cremers
00060167
0000046658
-
-
-
Unknown
-
-
0m
-
-
Frans Cremers
00060168
0000046659
-
-
-
Isolated (sporadic)
-
-
00y00m
-
-
Frans Cremers
00060169
0000046660
-
-
-
Unknown
-
-
0m
-
-
Frans Cremers
00060170
0000046661
-
-
-
Unknown
-
-
0m
-
-
Frans Cremers
00060171
0000046662
-
-
-
Unknown
-
-
43y
-
-
Frans Cremers
00060172
0000050415
-
-
-
Familial, autosomal recessive
-
-
-
-
-
Johan den Dunnen
00063827
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Legend
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