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Phenotypes for disease #03016 (CMT4J (Charcot-Marie-Tooth disease, type 4J (CMT-4J)), OMIM:611228)
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Please note that a short description of a certain column can be displayed when you move your mouse cursor over the column's header and hold it still. Below, a more detailed description is shown per column.
Phenotype details
: additional information on the phenotype of the individual, preferably use HPO terms only (http://www.human-phenotype-ontology.org/)
Diagnosis/Initial
: initial diagnosis, before molecular testing
Diagnosis/Definite
: phenotype individual after molecular testing (OMIM abbreviation)
Inheritance
: Indicates the inheritance of the phenotype in the family; unknown, familial (autosomal/X-linked, dominant/ recessive), paternal (Y-linked), maternal (mitochondrial), isolated (sporadic) or complex
All options:
Unknown
Familial
Familial, autosomal dominant
Familial, autosomal recessive
Familial, X-linked
Familial, X-linked dominant
Familial, X-linked dominant, male sparing
Familial, X-linked recessive
Paternal, Y-linked
Maternal, mitochondrial
Isolated (sporadic)
Di-genic
Complex
- = Not applicable
Age/Examination
: age at which the individual was examined.
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Age/Diagnosis
: age diagnosis was confirmed
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Age/Onset
: Age first symptoms disease appeared in individual:
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Phenotype/Onset
: individual's phenotype at Age/Onset described using HPO
Protein
: result from protein staining
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Text
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space
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|
Text
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!
Text
!fs
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Text
^p.(Arg
all entries beginning with 'p.(Arg'
$
Text
Ser)$
all entries ending with 'Ser)'
=""
Text
=""
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=""
Text
="p.0"
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!=""
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!=""
Text
!="p.0"
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combination
Text
*|Ter !fs
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Date
2020
all entries matching the year 2020
|
Date
2020-03|2020-04
all entries matching March or April, 2020
!
Date
!2020-03
all entries not matching March, 2020
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Date
<2020
all entries before the year 2020
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Date
<=2020-06
all entries in or before June, 2020
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Date
>2020-06
all entries after June, 2020
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Date
>=2020-06-15
all entries on or after June 15th, 2020
combination
Date
2019|2020 <2020-03
all entries in 2019 or 2020, and before March, 2020
Numeric
23
all entries exactly matching 23
|
Numeric
23|24
all entries exactly matching 23 or 24
!
Numeric
!23
all entries not exactly matching 23
<
Numeric
<23
all entries lower than 23
<=
Numeric
<=23
all entries lower than, or equal to, 23
>
Numeric
>23
all entries higher than 23
>=
Numeric
>=23
all entries higher than, or equal to, 23
combination
Numeric
>=20 <30 !23
all entries with values from 20 to 29, but not equal to 23
Some more advanced examples:
Example
Matches
Asian
all entries containing 'Asian', 'asian', including 'Caucasian', 'caucasian', etc.
Asian !Caucasian
all entries containing 'Asian' but not containing 'Caucasian'
Asian|African !Caucasian
all entries containing 'Asian' or 'African', but not containing 'Caucasian'
"South Asian"
all entries containing 'South Asian', but not containing 'South East Asian'
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Phenotype ID
Phenotype details
Diagnosis/Initial
Diagnosis/Definite
Inheritance
Age/Examination
Age/Diagnosis
Age/Onset
Phenotype/Onset
Protein
Owner
Individual ID
0000060870
-
-
-
Unknown
-
-
-
-
-
Gemeinschaftspraxis für Humangenetik Dresden
00081290
0000326472
Gait disturbance HP:0001288 Achilles tendon contracture HP:0001771 Pes cavus HP:0001761 Lower limb amyotrophy HP:0007210 Lower limb muscle weakness HP:0007340 Areflexia HP:0001284 Impaired tactile sensation HP:0010830 Distal upper limb amyotrophy HP:0007149 Upper limb muscle weakness HP:0003484 Demyelinating peripheral neuropathy HP:0007108 Sensorimotor neuropathy HP:0007141 Parkinsonism HP:0001300
-
CMT4J with parkinsonism
Familial, autosomal recessive
60y
-
10y-20y
Gait disturbance HP:0001288, Achilles tendon contracture HP:0001771
-
Barbora Lauerova
00436292
0000326525
Gait disturbance HP:0001288 Impaired tactile sensation HP:0010830 Lower limb muscle weakness HP:0007340 Lower limb amyotrophy HP:0007210 Upper limb muscle weakness HP:0003484 Demyelinating peripheral neuropathy HP:0007108 Sensorimotor neuropathy HP:0007141 Parkinsonism HP:0001300 Foot deformity HP:0001760
-
CMT4J with parkinsonism
Familial, autosomal recessive
70y
-
-
-
-
Barbora Lauerova
00436346
0000326526
Pes cavus HP:0001761 Lower limb muscle weakness HP:0007340 Areflexia HP:0001284 Distal upper limb amyotrophy HP:0007149 Upper limb muscle weakness HP:0003484 Gait disturbance HP:0001288 Demyelinating peripheral neuropathy HP:0007108 Sensorimotor neuropathy HP:0007141
-
CMT4J with parkinsonism
Familial, autosomal recessive
50y
-
<10y
-
-
Barbora Lauerova
00436347
0000330577
HP:0008947; HP:0001263; HP:0001249; HP:0001284; HP:0001266; HP:0000407; HP:0001271
hypotonia, global developmental delay, areflexia, dysmorphic features
CMT4J
Familial, autosomal recessive
02y
05y
02y?
-
-
Guillermo Lay-Son
00441138
0000330578
HP:0001271; HP:0006855
hypotonia, global developmental delay, areflexia, dysmorphic features
SCAR20
Familial, autosomal recessive
02y
05y
02y?
-
-
Guillermo Lay-Son
00441138
0000337703
Pes cavus HP:0001761 Lower limb muscle weakness HP:0007340 Areflexia HP:0001284 Distal upper limb amyotrophy HP:0007149 Upper limb muscle weakness HP:0003484 Gait disturbance HP:0001288 Demyelinating peripheral neuropathy HP:0007108 Sensorimotor neuropathy HP:0007141
-
CMT4J with parkinsonism
Familial, autosomal recessive
-
-
<10y
-
-
Barbora Lauerova
00448528
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