Global Variome shared LOVD
PYCR1 (pyrroline-5-carboxylate reductase 1)
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Phenotypes for disease #04508 (IMD27B (immunodeficiency, type 27B, mycobacteriosis, autosomal dominant (IMD-27B)), OMIM:615978)
Legend
Please note that a short description of a certain column can be displayed when you move your mouse cursor over the column's header and hold it still. Below, a more detailed description is shown per column.
Phenotype details
: additional information on the phenotype of the individual, preferably use HPO terms only (http://www.human-phenotype-ontology.org/)
Diagnosis/Initial
: initial diagnosis, before molecular testing
Diagnosis/Definite
: phenotype individual after molecular testing (OMIM abbreviation)
Inheritance
: Indicates the inheritance of the phenotype in the family; unknown, familial (autosomal/X-linked, dominant/ recessive), paternal (Y-linked), maternal (mitochondrial), isolated (sporadic) or complex
All options:
Unknown
Familial
Familial, autosomal dominant
Familial, autosomal recessive
Familial, X-linked
Familial, X-linked dominant
Familial, X-linked dominant, male sparing
Familial, X-linked recessive
Paternal, Y-linked
Maternal, mitochondrial
Isolated (sporadic)
Di-genic
Complex
- = Not applicable
Age/Examination
: age at which the individual was examined.
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Age/Diagnosis
: age diagnosis was confirmed
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Age/Onset
: Age first symptoms disease appeared in individual:
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Phenotype/Onset
: individual's phenotype at Age/Onset described using HPO
Protein
: result from protein staining
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Column type
Example
Matches
Text
Arg
all entries containing 'Arg'
space
Text
Arg Ser
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Text
Arg|Ser
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!
Text
!fs
all entries not containing 'fs'
^
Text
^p.(Arg
all entries beginning with 'p.(Arg'
$
Text
Ser)$
all entries ending with 'Ser)'
=""
Text
=""
all entries with this field empty
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Text
="p.0"
all entries exactly matching 'p.0'
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all entries with this field not empty
!=""
Text
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all entries not exactly matching 'p.0?'
combination
Text
*|Ter !fs
all entries containing '*' or 'Ter' but not containing 'fs'
Date
2020
all entries matching the year 2020
|
Date
2020-03|2020-04
all entries matching March or April, 2020
!
Date
!2020-03
all entries not matching March, 2020
<
Date
<2020
all entries before the year 2020
<=
Date
<=2020-06
all entries in or before June, 2020
>
Date
>2020-06
all entries after June, 2020
>=
Date
>=2020-06-15
all entries on or after June 15th, 2020
combination
Date
2019|2020 <2020-03
all entries in 2019 or 2020, and before March, 2020
Numeric
23
all entries exactly matching 23
|
Numeric
23|24
all entries exactly matching 23 or 24
!
Numeric
!23
all entries not exactly matching 23
<
Numeric
<23
all entries lower than 23
<=
Numeric
<=23
all entries lower than, or equal to, 23
>
Numeric
>23
all entries higher than 23
>=
Numeric
>=23
all entries higher than, or equal to, 23
combination
Numeric
>=20 <30 !23
all entries with values from 20 to 29, but not equal to 23
Some more advanced examples:
Example
Matches
Asian
all entries containing 'Asian', 'asian', including 'Caucasian', 'caucasian', etc.
Asian !Caucasian
all entries containing 'Asian' but not containing 'Caucasian'
Asian|African !Caucasian
all entries containing 'Asian' or 'African', but not containing 'Caucasian'
"South Asian"
all entries containing 'South Asian', but not containing 'South East Asian'
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42 entries on 1 page. Showing entries 1 - 42.
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Legend
How to query
Phenotype ID
Phenotype details
Diagnosis/Initial
Diagnosis/Definite
Inheritance
Age/Examination
Age/Diagnosis
Age/Onset
Phenotype/Onset
Protein
Owner
Individual ID
0000199204
-
-
-
Familial, autosomal dominant
-
-
-
-
-
LOVD
00260659
0000199205
-
-
-
Familial, autosomal dominant
-
-
-
-
-
LOVD
00260660
0000199206
-
-
-
Familial, autosomal dominant
-
-
-
-
-
LOVD
00260661
0000199207
-
-
-
Isolated (sporadic)
-
-
-
-
-
LOVD
00260662
0000199208
-
-
-
Isolated (sporadic)
-
-
-
-
-
LOVD
00260663
0000199209
-
-
-
Isolated (sporadic)
-
-
-
-
-
LOVD
00260664
0000199210
-
-
-
Isolated (sporadic)
-
-
-
-
-
LOVD
00260665
0000199211
-
-
-
Isolated (sporadic)
-
-
-
-
-
LOVD
00260666
0000199212
-
-
-
Isolated (sporadic)
-
-
-
-
-
LOVD
00260667
0000199213
-
-
-
Isolated (sporadic)
-
-
-
-
-
LOVD
00260668
0000199214
-
-
-
Isolated (sporadic)
-
-
-
-
-
LOVD
00260669
0000199215
-
-
-
Isolated (sporadic)
-
-
-
-
-
LOVD
00260670
0000199216
-
-
-
Familial, autosomal dominant
-
-
-
-
-
LOVD
00260672
0000199217
-
-
-
Familial, autosomal dominant
-
-
-
-
-
LOVD
00260673
0000199218
-
-
-
Familial, autosomal dominant
-
-
-
-
-
LOVD
00260674
0000199219
-
-
-
Isolated (sporadic)
-
-
-
-
-
LOVD
00260675
0000199220
-
-
-
Familial, autosomal dominant
-
-
-
-
-
LOVD
00260676
0000199221
-
-
-
Isolated (sporadic)
-
-
-
-
-
LOVD
00260678
0000199222
-
-
-
Familial, autosomal dominant
-
-
-
-
-
LOVD
00260679
0000199223
-
-
-
Isolated (sporadic)
-
-
-
-
-
LOVD
00260680
0000199224
-
-
-
Familial, autosomal dominant
-
-
-
-
-
LOVD
00260681
0000199225
-
-
-
Familial, autosomal dominant
-
-
-
-
-
LOVD
00260688
0000199226
-
-
-
Isolated (sporadic)
-
-
-
-
-
LOVD
00260689
0000199227
-
-
-
Familial, autosomal dominant
-
-
-
-
-
LOVD
00260690
0000199228
-
-
-
Familial, autosomal dominant
-
-
-
-
-
LOVD
00260691
0000199229
-
-
-
Familial, autosomal dominant
-
-
-
-
-
LOVD
00260692
0000199230
-
-
-
Familial, autosomal dominant
-
-
-
-
-
LOVD
00260695
0000199231
-
-
-
Familial, autosomal dominant
-
-
-
-
-
LOVD
00260696
0000199232
-
-
-
Isolated (sporadic)
-
-
-
-
-
LOVD
00260697
0000199233
-
-
-
Isolated (sporadic)
-
-
-
-
-
LOVD
00260698
0000199234
-
-
-
Isolated (sporadic)
-
-
-
-
-
LOVD
00260699
0000199235
-
-
-
Familial, autosomal dominant
-
-
10m
-
-
LOVD
00260700
0000199236
-
-
-
Isolated (sporadic)
-
-
-
-
-
LOVD
00260701
0000199237
-
-
-
-
-
-
4m
-
-
LOVD
00260703
0000199238
-
-
-
Isolated (sporadic)
-
-
3m
-
-
LOVD
00260704
0000199239
-
-
-
-
-
-
4m
-
-
LOVD
00260705
0000199240
-
-
-
Familial, autosomal dominant
-
-
-
-
-
LOVD
00260706
0000199242
-
-
-
Isolated (sporadic)
-
-
-
-
-
LOVD
00260709
0000199288
-
-
-
Isolated (sporadic)
-
-
-
-
-
LOVD
00260760
0000199290
-
-
-
Familial, autosomal dominant
-
-
-
-
-
LOVD
00260671
0000199291
-
-
-
Familial, autosomal dominant
-
-
-
-
-
LOVD
00260702
0000199292
-
-
-
Familial, autosomal dominant
-
-
-
-
-
LOVD
00260708
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