Global Variome shared LOVD
LOVD v.3.0 Build 30b [
Current LOVD status
]
Register as submitter
|
Log in
View all genes
Create a new gene entry
View all transcripts
Create a new transcript information entry
View all variants
View all variants affecting transcripts
Create a new data submission
View active genomic custom columns
Enable more genomic custom columns
View all individuals
Create a new data submission
View active custom columns
Enable more custom columns
View all diseases
Create a new disease information entry
View available phenotype columns
View all screenings
Create a new data submission
View active custom columns
Enable more custom columns
Submit new data
Phenotypes for disease #05093 (cancer (cancer))
Legend
Please note that a short description of a certain column can be displayed when you move your mouse cursor over the column's header and hold it still. Below, a more detailed description is shown per column.
Phenotype details
: additional information on the phenotype of the individual, preferably use HPO terms only (http://www.human-phenotype-ontology.org/)
Diagnosis/Initial
: initial diagnosis, before molecular testing
Diagnosis/Definite
: phenotype individual after molecular testing (OMIM abbreviation)
Inheritance
: Indicates the inheritance of the phenotype in the family; unknown, familial (autosomal/X-linked, dominant/ recessive), paternal (Y-linked), maternal (mitochondrial), isolated (sporadic) or complex
All options:
Unknown
Familial
Familial, autosomal dominant
Familial, autosomal recessive
Familial, X-linked
Familial, X-linked dominant
Familial, X-linked dominant, male sparing
Familial, X-linked recessive
Paternal, Y-linked
Maternal, mitochondrial
Isolated (sporadic)
Di-genic
Complex
- = Not applicable
Age/Examination
: age at which the individual was examined.
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Age/Diagnosis
: age diagnosis was confirmed
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Age/Onset
: Age first symptoms disease appeared in individual:
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Phenotype/Onset
: individual's phenotype at Age/Onset described using HPO
Protein
: result from protein staining
Tumor/MSI
: tumor MSI (micro-sattelite instability); MSI-H (MSI-high), MSI-L (MSI-low), MSS ( microsatellite stable), ? (unknown), n/a (not analysed)
Diagnosis/Criteria
: why was individual tested?
Cancer/Sub_type
: cancer(s) identified in individual
All options:
CDC = collecting duct carcinoma (CDC)
CL = cutaneous leiomyoma (CL)
GIST = gastrointestinal stromal tumor (GIST)
HLRCC = hereditary leiomyomatosis and renal cell cancer (HLRCC)
LCT = leydig cell tumor (LCT)
MCUL = multiple cutaneous leiomyoma (MCUL)
MMAD = masive macronodular adrenocortical disease (MMAD)
OMS = ovarian mucinous cystadenoma (OMS)
ONC = oncocytoma (ONC)
PCC = pheochromocytoma
PCC-EA = pheochromocytoma extra-adrenal
PCC-Z = pheochromocytoma zuckerkandl
PGL = paraganglioma
PGL-B = paraganglioma bladder
PGL-C = paraganglioma cardiac
PGL-CB = paraganglioma carotid body
PGL-EA = paraganglioma extra-adrenal
PGL-F = paraganglioma functional
PGL-HN = paraganglioma head and neck
PGL-IA = paraganglioma intra-abdominal
PGL-J = paraganglioma jugular
PGL-JT = paraganglioma jugulotympanic
PGL-MF = paraganglioma multifocal
PGL-PA = paraganglioma para-aortic
PGL-R = paraganglioma renal
PGL-V = paraganglioma vagal
PGL-Z = paraganglioma zuckerkandl
PMA = pituitary macroadenoma (PMA)
PTC = papillary thyroid carcinoma (PTC)
RCC = renal cell carcinoma (RCC)
STS = soft tissue sarcoma (STS)
UL = uterine leiomyoma (UL)
ULMS = uterine leiomyosarcoma (ULMS)
How to query this table
All list views have search fields which can be used to search data. You can search for a complete word or you can search for a part of a search term. If you enclose two or more words in double quotes, LOVD will search for the combination of those words only exactly in the order you specify. Note that search terms are case-insensitive and that wildcards such as * are treated as normal text! For all options, like "and", "or", and "not" searches, or searching for prefixes or suffixes, see the table below.
Operator
Column type
Example
Matches
Text
Arg
all entries containing 'Arg'
space
Text
Arg Ser
all entries containing 'Arg' and 'Ser'
|
Text
Arg|Ser
all entries containing 'Arg' or 'Ser'
!
Text
!fs
all entries not containing 'fs'
^
Text
^p.(Arg
all entries beginning with 'p.(Arg'
$
Text
Ser)$
all entries ending with 'Ser)'
=""
Text
=""
all entries with this field empty
=""
Text
="p.0"
all entries exactly matching 'p.0'
!=""
Text
!=""
all entries with this field not empty
!=""
Text
!="p.0"
all entries not exactly matching 'p.0?'
combination
Text
*|Ter !fs
all entries containing '*' or 'Ter' but not containing 'fs'
Date
2020
all entries matching the year 2020
|
Date
2020-03|2020-04
all entries matching March or April, 2020
!
Date
!2020-03
all entries not matching March, 2020
<
Date
<2020
all entries before the year 2020
<=
Date
<=2020-06
all entries in or before June, 2020
>
Date
>2020-06
all entries after June, 2020
>=
Date
>=2020-06-15
all entries on or after June 15th, 2020
combination
Date
2019|2020 <2020-03
all entries in 2019 or 2020, and before March, 2020
Numeric
23
all entries exactly matching 23
|
Numeric
23|24
all entries exactly matching 23 or 24
!
Numeric
!23
all entries not exactly matching 23
<
Numeric
<23
all entries lower than 23
<=
Numeric
<=23
all entries lower than, or equal to, 23
>
Numeric
>23
all entries higher than 23
>=
Numeric
>=23
all entries higher than, or equal to, 23
combination
Numeric
>=20 <30 !23
all entries with values from 20 to 29, but not equal to 23
Some more advanced examples:
Example
Matches
Asian
all entries containing 'Asian', 'asian', including 'Caucasian', 'caucasian', etc.
Asian !Caucasian
all entries containing 'Asian' but not containing 'Caucasian'
Asian|African !Caucasian
all entries containing 'Asian' or 'African', but not containing 'Caucasian'
"South Asian"
all entries containing 'South Asian', but not containing 'South East Asian'
To sort on a certain column, click on the column header or on the arrows. If that column is already selected to sort on, the sort order will be swapped. The column currently sorted on has a darker blue background color than the other columns. The up and down arrows next to the column name indicate the current sorting direction. When sorting on any field other than the default, LOVD will sort secondarily on the default sort column.
703 entries on 8 pages. Showing entries 1 - 100.
10 per page
25 per page
50 per page
100 per page
Legend
How to query
« First
Prev
1
2
3
4
5
6
7
8
Next
Last »
Phenotype ID
Phenotype details
Diagnosis/Initial
Diagnosis/Definite
Inheritance
Age/Examination
Age/Diagnosis
Age/Onset
Phenotype/Onset
Protein
Tumor/MSI
Diagnosis/Criteria
Cancer/Sub_type
Owner
Individual ID
0000041553
-
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00054861
0000044708
-
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058077
0000044709
-
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058078
0000044710
renal, carcinoma, clear cell
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058079
0000044711
melanoma, metastatic
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058080
0000044712
melanoma, metastatic
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058081
0000044713
melanoma, metastatic
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058082
0000044714
-
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058083
0000044716
-
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058085
0000044717
breast, cancer, IDC
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058086
0000044718
-
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058087
0000044719
-
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058088
0000044720
breast, cancer, IDC
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058089
0000044721
-
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058090
0000044722
bladder, carcinoma, transitional cell
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058091
0000044723
-
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058092
0000044724
-
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058093
0000044725
lung, carcinoma, small cell
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058094
0000044726
head and neck, carcinoma, squamous cell
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058095
0000044727
bladder, carcinoma, NOS
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058096
0000044728
-
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058097
0000044729
-
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058098
0000044730
melanoma
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058099
0000044731
lung, carcinoma, small cell
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058100
0000044732
-
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058101
0000044733
-
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058102
0000044734
lung, carcinoma, neuroendocrine
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058103
0000044735
-
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058104
0000044736
lung, carcinoma, small cell
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058105
0000044737
-
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058106
0000044739
-
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058108
0000044740
breast, cancer, pleomorphic, lobular
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058109
0000044741
breast, cancer, IDC
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058110
0000044742
-
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058111
0000044743
-
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058112
0000044744
-
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058113
0000044745
-
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058114
0000044746
lung, carcinoma, large cell
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058115
0000044747
lung, carcinoma, large cell
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058116
0000044748
-
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058117
0000044749
ovarian, carcinoma, serous
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058118
0000044750
ovarian, carcinoma, Mucinous
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058119
0000044751
ovarian, carcinoma, serous
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058120
0000044752
-
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058121
0000044753
-
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058122
0000044754
-
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058123
0000044755
-
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058124
0000044756
-
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058125
0000044757
ovarian, carcinoma, serous
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058126
0000044758
ovarian, carcinoma, serous
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058127
0000044759
-
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058128
0000044760
-
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058129
0000044761
-
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058130
0000044762
-
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058131
0000044763
lung, carcinoma, large cell
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058132
0000044764
-
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058133
0000044765
-
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058134
0000044766
lung, carcinoma, squamous
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058135
0000044767
-
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058136
0000044768
lung, carcinoma, squamous
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058137
0000044769
-
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058138
0000044770
-
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058139
0000044771
-
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058140
0000044772
-
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058141
0000044773
-
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058142
0000044774
-
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058143
0000044775
-
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058144
0000044776
-
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058145
0000044777
-
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058146
0000044778
-
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058147
0000044779
-
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058148
0000044780
adenocarcinoma, gastric
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058149
0000044781
-
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058150
0000044782
adenocarcinoma, gastric
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058151
0000044783
adenocarcinoma, gastric
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058152
0000044784
adenocarcinoma, gastric
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058153
0000044785
adenocarcinoma, gastric
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058154
0000044786
adenocarcinoma, gastric
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058155
0000044787
adenocarcinoma, gastric
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058156
0000044788
adenocarcinoma, gastric
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058157
0000044789
adenocarcinoma, gastric
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058158
0000044790
-
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058159
0000044791
adenocarcinoma, gastric
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058160
0000044792
adenocarcinoma, gastric
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058161
0000044793
adenocarcinoma, gastric
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058162
0000044794
adenocarcinoma, gastric
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058163
0000044795
adenocarcinoma, gastric
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058164
0000044796
-
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058165
0000044797
-
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058166
0000044798
adenocarcinoma, colorectal
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058167
0000044799
-
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058168
0000044800
adenocarcinoma, colorectal
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058169
0000044801
adenocarcinoma, colorectal
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058170
0000044802
adenocarcinoma, colorectal
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058171
0000044803
-
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058172
0000044804
-
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058173
0000044805
adenocarcinoma, colorectal
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058174
0000044806
-
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058175
0000044807
adenocarcinoma, colorectal
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058176
0000044808
-
-
-
Unknown
-
-
-
-
-
-
-
-
Johan den Dunnen
00058177
10 per page
25 per page
50 per page
100 per page
Legend
How to query
« First
Prev
1
2
3
4
5
6
7
8
Next
Last »
Screenscraping/webscraping (downloading large amounts of data using scripts) is strictly prohibited.
Use our
APIs
to retrieve data.
Powered by
LOVD v.3.0
Build 30b
LOVD software ©2004-2024
Leiden University Medical Center
Database contents © by their respective submitters and curators