Global Variome shared LOVD
APC (adenomatous polyposis coli)
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Curators:
Stefan Aretz
,
Isabel Spier
, and
Xiaoyu Sherry Yin
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Phenotypes for disease #05396 (FSGS (glomerulosclerosis, segmental, focal (FSGS)))
Legend
Please note that a short description of a certain column can be displayed when you move your mouse cursor over the column's header and hold it still. Below, a more detailed description is shown per column.
Diagnosis/Initial
: initial diagnosis, before molecular testing
Diagnosis/Definite
: phenotype individual after molecular testing (OMIM abbreviation)
Phenotype details
: additional information on the phenotype of the individual, preferably use HPO terms only (http://www.human-phenotype-ontology.org/)
Inheritance
: Indicates the inheritance of the phenotype in the family; unknown, familial (autosomal/X-linked, dominant/ recessive), paternal (Y-linked), maternal (mitochondrial), isolated (sporadic) or complex
All options:
Unknown
Familial
Familial, autosomal dominant
Familial, autosomal recessive
Familial, X-linked
Familial, X-linked dominant
Familial, X-linked dominant, male sparing
Familial, X-linked recessive
Paternal, Y-linked
Maternal, mitochondrial
Isolated (sporadic)
Di-genic
Complex
- = Not applicable
Age/Examination
: age at which the individual was examined.
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Age/Diagnosis
: age diagnosis was confirmed
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Age/Onset
: Age first symptoms disease appeared in individual:
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Phenotype/Onset
: individual's phenotype at Age/Onset described using HPO
Protein
: result from protein staining
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Date
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Date
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all entries on or after June 15th, 2020
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Numeric
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Numeric
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Numeric
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all entries lower than 23
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Numeric
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all entries lower than, or equal to, 23
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Numeric
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Numeric
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all entries higher than, or equal to, 23
combination
Numeric
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all entries with values from 20 to 29, but not equal to 23
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Example
Matches
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all entries containing 'Asian', 'asian', including 'Caucasian', 'caucasian', etc.
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all entries containing 'Asian' but not containing 'Caucasian'
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all entries containing 'Asian' or 'African', but not containing 'Caucasian'
"South Asian"
all entries containing 'South Asian', but not containing 'South East Asian'
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20 entries on 1 page. Showing entries 1 - 20.
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How to query
Phenotype ID
Diagnosis/Initial
Diagnosis/Definite
Phenotype details
Inheritance
Age/Examination
Age/Diagnosis
Age/Onset
Phenotype/Onset
Protein
Owner
Individual ID
0000126377
glomerulosclerosis, segmental, focal (FSGS)
-
8y-diagnosed, progressed to ESRF within 4y; hearing loss (HP:0000365); no ocular changes; 12y-renal failure (HP:0000083); hematuria (HP:0000790); proteinuria (HP:0000093)
Unknown
8y
-
-
-
-
Judy Savige
00153700
0000126380
glomerulosclerosis, segmental, focal (FSGS)
-
no hearing loss (-HP:0000365); no ocular changes; no GBM pathology ; hematuria (HP:0000790); proteinuria (HP:0000093)
Unknown
35y
-
-
-
-
Judy Savige
00153703
0000126439
glomerulosclerosis, segmental, focal (FSGS)
-
hearing loss (HP:0000365); no ocular changes; GBM pathology thinning; 60y-renal failure (HP:0000083); hematuria (HP:0000790); no proteinuria (-HP:0000093)
Unknown
36y
-
-
-
-
Judy Savige
00153762
0000126446
glomerulosclerosis, segmental, focal (FSGS)
-
no hearing loss (-HP:0000365); no ocular changes; 45y-renal failure (HP:0000083); hematuria (HP:0000790); proteinuria (HP:0000093)
Unknown
45y
-
-
-
-
Judy Savige
00153769
0000126509
glomerulosclerosis, segmental, focal (FSGS)
-
-
Unknown
66y
-
-
-
-
Judy Savige
00153832
0000126510
glomerulosclerosis, segmental, focal (FSGS)
-
no hearing loss (-HP:0000365); no ocular changes; 42y-renal failure (HP:0000083)
Unknown
36y
-
-
-
-
Judy Savige
00153833
0000126520
glomerulosclerosis, segmental, focal (FSGS)
-
no hearing loss (-HP:0000365); no ocular changes; GBM pathology thickening; 37y-renal failure (HP:0000083); hematuria (HP:0000790); proteinuria (HP:0000093)
Unknown
18y
-
-
-
-
Judy Savige
00153843
0000126532
glomerulosclerosis, segmental, focal (FSGS)
-
no hearing loss (-HP:0000365); no ocular changes; GBM pathology thickened; hematuria (HP:0000790); proteinuria (HP:0000093)
Unknown
35y
-
-
-
-
Judy Savige
00153855
0000126612
glomerulosclerosis, segmental, focal (FSGS)
-
-
Unknown
43y
-
-
-
-
Judy Savige
00153935
0000126730
glomerulosclerosis, segmental, focal (FSGS)
-
-
Unknown
-
-
-
-
-
Judy Savige
00154053
0000126875
glomerulosclerosis, segmental, focal (FSGS)
-
-
Unknown
-
-
-
-
-
Judy Savige
00154198
0000239008
FSGS
-
focal segmental glomerulosclerosis; focal segmental glomerulosclerosis, echogenic kidneys
Familial, autosomal dominant
-
8y
-
-
-
Matthew Bower
00315256
0000239009
FSGS
-
focal segmental glomerulosclerosis; focal segmental glomerulosclerosis
Familial, autosomal dominant
-
-
8y
-
-
Matthew Bower
00315257
0000239012
FSGS
-
focal segmental glomerulosclerosis; proteinuria
Familial
-
-
07y-11y
-
-
Matthew Bower
00315260
0000239013
FSGS
-
focal segmental glomerulosclerosis, normal hearing; kidney periodic acid–schiff staining revealed several segmentally sclerosed glomeruli, electron microscopy showed diffuse podo- cytopathy as evidenced by degenerative changes, microvillous transformation, vacuolization, and lysosome accumulation but with focal foot process effacement
Familial, autosomal dominant
-
68y
68y
-
-
Matthew Bower
00315261
0000239014
FSGS
-
focal segmental glomerulosclerosis
Familial, autosomal dominant
-
-
-
-
-
Matthew Bower
00315262
0000239015
FSGS
-
focal segmental glomerulosclerosis
Familial, autosomal dominant
-
-
-
-
-
Matthew Bower
00315263
0000239017
FSGS
-
focal segmental glomerulosclerosis
Familial, autosomal dominant
-
-
-
-
-
Matthew Bower
00315265
0000239019
FSGS
-
focal segmental glomerulosclerosis
Familial
-
36y
-
-
-
Matthew Bower
00315267
0000239020
FSGS
-
focal segmental glomerulosclerosis
Familial, autosomal dominant
-
31y-32y
31y-32y
-
-
Matthew Bower
00315268
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