Global Variome shared LOVD
USP48 (ubiquitin specific peptidase 48)
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Phenotypes for disease #05458 (DFN (deafness, nonsyndromic (DFN)))
Legend
Please note that a short description of a certain column can be displayed when you move your mouse cursor over the column's header and hold it still. Below, a more detailed description is shown per column.
Diagnosis/Initial
: initial diagnosis, before molecular testing
Diagnosis/Definite
: phenotype individual after molecular testing (OMIM abbreviation)
Phenotype details
: additional information on the phenotype of the individual, preferably use HPO terms only (http://www.human-phenotype-ontology.org/)
Inheritance
: Indicates the inheritance of the phenotype in the family; unknown, familial (autosomal/X-linked, dominant/ recessive), paternal (Y-linked), maternal (mitochondrial), isolated (sporadic) or complex
All options:
Unknown
Familial
Familial, autosomal dominant
Familial, autosomal recessive
Familial, X-linked
Familial, X-linked dominant
Familial, X-linked dominant, male sparing
Familial, X-linked recessive
Paternal, Y-linked
Maternal, mitochondrial
Isolated (sporadic)
Di-genic
Complex
- = Not applicable
Age/Examination
: age at which the individual was examined.
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Age/Diagnosis
: age diagnosis was confirmed
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Age/Onset
: Age first symptoms disease appeared in individual:
35y = 35 years
04y08m = 4 years and 8 months
00y00m01d12h = 1 day and 12 hours
18y? = around 18 years
30y-40y = between 30 and 40 years
>54y = older than 54
? = unknown
Phenotype/Onset
: individual's phenotype at Age/Onset described using HPO
Protein
: result from protein staining
How to query this table
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Operator
Column type
Example
Matches
Text
Arg
all entries containing 'Arg'
space
Text
Arg Ser
all entries containing 'Arg' and 'Ser'
|
Text
Arg|Ser
all entries containing 'Arg' or 'Ser'
!
Text
!fs
all entries not containing 'fs'
^
Text
^p.(Arg
all entries beginning with 'p.(Arg'
$
Text
Ser)$
all entries ending with 'Ser)'
=""
Text
=""
all entries with this field empty
=""
Text
="p.0"
all entries exactly matching 'p.0'
!=""
Text
!=""
all entries with this field not empty
!=""
Text
!="p.0"
all entries not exactly matching 'p.0?'
combination
Text
*|Ter !fs
all entries containing '*' or 'Ter' but not containing 'fs'
Date
2020
all entries matching the year 2020
|
Date
2020-03|2020-04
all entries matching March or April, 2020
!
Date
!2020-03
all entries not matching March, 2020
<
Date
<2020
all entries before the year 2020
<=
Date
<=2020-06
all entries in or before June, 2020
>
Date
>2020-06
all entries after June, 2020
>=
Date
>=2020-06-15
all entries on or after June 15th, 2020
combination
Date
2019|2020 <2020-03
all entries in 2019 or 2020, and before March, 2020
Numeric
23
all entries exactly matching 23
|
Numeric
23|24
all entries exactly matching 23 or 24
!
Numeric
!23
all entries not exactly matching 23
<
Numeric
<23
all entries lower than 23
<=
Numeric
<=23
all entries lower than, or equal to, 23
>
Numeric
>23
all entries higher than 23
>=
Numeric
>=23
all entries higher than, or equal to, 23
combination
Numeric
>=20 <30 !23
all entries with values from 20 to 29, but not equal to 23
Some more advanced examples:
Example
Matches
Asian
all entries containing 'Asian', 'asian', including 'Caucasian', 'caucasian', etc.
Asian !Caucasian
all entries containing 'Asian' but not containing 'Caucasian'
Asian|African !Caucasian
all entries containing 'Asian' or 'African', but not containing 'Caucasian'
"South Asian"
all entries containing 'South Asian', but not containing 'South East Asian'
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44 entries on 1 page. Showing entries 1 - 44.
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Legend
How to query
Phenotype ID
Diagnosis/Initial
Diagnosis/Definite
Phenotype details
Inheritance
Age/Examination
Age/Diagnosis
Age/Onset
Phenotype/Onset
Protein
Owner
Individual ID
0000132003
non-syndromic deafness
-
-
Unknown
-
-
-
-
-
Anne-Françoise Roux
00167139
0000132004
non-syndromic deafness
-
-
Unknown
-
-
-
-
-
Anne-Françoise Roux
00167140
0000132005
non-syndromic deafness
-
-
Familial, autosomal recessive
-
-
-
-
-
Anne-Françoise Roux
00167141
0000132006
non-syndromic deafness
-
-
Familial, autosomal recessive
-
-
-
-
-
Anne-Françoise Roux
00167142
0000132007
non-syndromic deafness
-
-
Unknown
-
-
-
-
-
Anne-Françoise Roux
00167143
0000132008
non-syndromic deafness
-
-
Unknown
-
-
-
-
-
Anne-Françoise Roux
00167144
0000132021
non-syndromic deafness
-
-
Unknown
-
-
-
-
-
Anne-Françoise Roux
00167157
0000132022
non-syndromic deafness
-
-
Unknown
-
-
-
-
-
Anne-Françoise Roux
00167158
0000132023
non-syndromic deafness
-
-
Unknown
-
-
-
-
-
Anne-Françoise Roux
00167159
0000132145
non-syndromic deafness
-
-
Unknown
-
-
-
-
-
Anne-Françoise Roux
00167281
0000132146
non-syndromic deafness
-
-
Unknown
-
-
-
-
-
Anne-Françoise Roux
00167282
0000132147
non-syndromic deafness
-
-
Unknown
-
-
-
-
-
Anne-Françoise Roux
00167283
0000132474
non-syndromic deafness
-
Sever SNHL, No inner ear malformation, No thyroid abnormalities, Age 2 years old
Unknown
-
-
-
-
-
Anne-Françoise Roux
00167610
0000132475
non-syndromic deafness
-
Moderate SNHL, No inner ear malformation, No thyroid abnormalities, Age 5 years old
Unknown
-
-
-
-
-
Anne-Françoise Roux
00167611
0000132476
non-syndromic deafness
-
Profound SNHL, No inner ear malformations, No thyroid abnormalities, Age 5 years old
Unknown
-
-
-
-
-
Anne-Françoise Roux
00167612
0000132477
non-syndromic deafness
-
Moderate SNHL, No inner ear malformations, No thyroid anbormalities, Age 7 years old
Unknown
-
-
-
-
-
Anne-Françoise Roux
00167613
0000132478
non-syndromic deafness
-
Profound SNHL, No inner ear malformations, No thyroid abnormalities, Age 14 years old
Unknown
-
-
-
-
-
Anne-Françoise Roux
00167614
0000132490
non-syndromic deafness
-
Profound SNHL, No inner ear malformations, No thyroid abnormalities, Age 1 year old
Unknown
-
-
-
-
-
Anne-Françoise Roux
00167626
0000132571
non-syndromic deafness
-
-
Unknown
-
-
-
-
-
Hideki Mutai
00167707
0000132572
non-syndromic deafness
-
-
Unknown
-
-
-
-
-
Hideki Mutai
00167708
0000132573
non-syndromic deafness
-
-
Unknown
-
-
-
-
-
Hideki Mutai
00167709
0000132574
non-syndromic deafness
-
-
Unknown
-
-
-
-
-
Hideki Mutai
00167710
0000132575
non-syndromic deafness
-
-
Unknown
-
-
-
-
-
Hideki Mutai
00167711
0000132576
non-syndromic deafness
-
-
Unknown
-
-
-
-
-
Hideki Mutai
00167712
0000132577
non-syndromic deafness
-
-
Unknown
-
-
-
-
-
Hideki Mutai
00167713
0000132578
non-syndromic deafness
-
-
Unknown
-
-
-
-
-
Hideki Mutai
00167714
0000132579
non-syndromic deafness
-
-
Unknown
-
-
-
-
-
Hideki Mutai
00167715
0000132580
non-syndromic deafness
-
-
Unknown
-
-
-
-
-
Hideki Mutai
00167716
0000132626
non-syndromic deafness
-
no EVA
Unknown
-
-
-
-
-
Silvia Dossena
00167762
0000132888
non-syndromic deafness
-
-
Familial, autosomal recessive
-
-
-
-
-
Anne-Françoise Roux
00168024
0000132889
non-syndromic deafness
-
-
Unknown
-
-
-
-
-
Anne-Françoise Roux
00168025
0000133590
non-syndromic deafness (DFN)
-
-
Unknown
-
-
-
-
-
Anne-Françoise Roux
00168730
0000133591
non-syndromic deafness (DFN)
-
-
Unknown
-
-
-
-
-
Anne-Françoise Roux
00168731
0000135135
non-syndromic deafness
-
-
Unknown
-
-
-
-
-
Anne-Françoise Roux
00170274
0000135136
non-syndromic deafness
-
-
Unknown
-
-
-
-
-
Anne-Françoise Roux
00170275
0000135137
non-syndromic deafness
-
-
Unknown
-
-
-
-
-
Anne-Françoise Roux
00170276
0000135196
non-syndromic deafness
-
-
Unknown
-
-
-
-
-
Anne-Françoise Roux
00170335
0000135368
non-syndromic deafness
-
-
Unknown
-
-
-
-
-
Anne-Françoise Roux
00170507
0000135664
non-syndromic deafness
-
-
Unknown
-
-
-
-
-
Anne-Françoise Roux
00170803
0000135665
non-syndromic deafness
-
-
Unknown
-
-
-
-
-
Anne-Françoise Roux
00170804
0000135666
non-syndromic deafness
-
-
Unknown
-
-
-
-
-
Anne-Françoise Roux
00170805
0000135667
non-syndromic deafness
-
-
Unknown
-
-
-
-
-
Anne-Françoise Roux
00170806
0000278746
-
-
-
Unknown
-
-
-
-
-
Tao Cai
00384965
0000350491
-
-
-
Familial, autosomal recessive
-
-
-
-
-
Yu Li
00464462
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Legend
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