APOBEC1 complementation factor (A1CF) - 6542 nt intron 05 reference sequence

(intronic numbering for coding DNA Reference Sequence)


         .         .         .         .         .         .  g.40071
gtaagcagagggtcttagaagtgagttggcattttactcgttctcttttacagaaacaca  c.123+60

         .         .         .         .         .         .  g.40131
cacacacacacaaatgctttttgttttctaattttgaaaaacactcgaataagttttctg  c.123+120

         .         .         .         .         .         .  g.40191
ttttgtaattttgaaaaacactgacaaaatgttttctgttttctaattttgtctattttc  c.123+180

         .         .         .         .         .         .  g.40251
aaattcaatattcttatgaatgaccaaaatcttacattataaaaagctttgcaaaacaca  c.123+240

         .         .         .         .         .         .  g.40311
tcatttaaaaaagcctatttgcttttgaatgcttcaaacgttgatactgaataatcctta  c.123+300

         .         .         .         .         .         .  g.40371
aacataaagggaaattattaaaagatattattaaatgcatcaacttgaaaacataaatta  c.123+360

         .         .         .         .         .         .  g.40431
cttctgcttccataagatagttaacaacttcaagtgaaattgggattaatttccttggaa  c.123+420

         .         .         .         .         .         .  g.40491
atagactttcaatggtcaatcttccaaagtgaaacaggaaggtgactcataatttactca  c.123+480

         .         .         .         .         .         .  g.40551
tagttgtttccttagaagaaccatatcatacattttttaaagataaaatgtcagggcttt  c.123+540

         .         .         .         .         .         .  g.40611
gtaaaaagtgaaaccaataaatgaaagtcaagagccaagagccatttgcatctttcttca  c.123+600

         .         .         .         .         .         .  g.40671
tgatttttgccatagatacatgccaccaatattatttatttagaattcattaaatctcct  c.123+660

         .         .         .         .         .         .  g.40731
ggctaacacagtgaaactccgtctctactaaaaagtacaaaaaattagccaggcatggtt  c.123+720

         .         .         .         .         .         .  g.40791
gcaggcgcctgtagtctcagctactggggaggcagaggcaggagaatagcgtgaagccag  c.123+780

         .         .         .         .         .         .  g.40851
gaggcggagcttgcagtgagctgagattgcgccactgcactccagcctgggcgacagagc  c.123+840

         .         .         .         .         .         .  g.40911
gagactccgtctcaaaaaaaaaaaaaaaaaaaaaaaaagaattcattaaatcaactcact  c.123+900

         .         .         .         .         .         .  g.40971
atttttagtcgtttatgttaaaagcaaactttttctcacatatgtaagaaacccacaggt  c.123+960

         .         .         .         .         .         .  g.41031
tttgtgtgctaattatactttttctaatgtacattaaaataaatgcataattattaaaat  c.123+1020

         .         .         .         .         .         .  g.41091
aagaaatactgacctataaaccatctaatatcatcctcacatattttgagaaacactagg  c.123+1080

         .         .         .         .         .         .  g.41151
ctatatgatgataaagctaaattaatatttgataatgttcatatcgtagcttttcctgtc  c.123+1140

         .         .         .         .         .         .  g.41211
tttgtttctaatctacatttccacaaaatttcaacaactcatttagtctttatacacaat  c.123+1200

         .         .         .         .         .         .  g.41271
ttttattattcttcctactttaggaacattatatctggcattcaagttgcatacatcttg  c.123+1260

         .         .         .         .         .         .  g.41331
taaaaattgtagaaaaatagccaatagaaataatgccaacttctacagtatattaagcca  c.123+1320

         .         .         .         .         .         .  g.41391
aataaattctgctttctaaattccagtctaaaaacagattttaccaacatgaagtcactg  c.123+1380

         .         .         .         .         .         .  g.41451
attttaacaagatgtgaaggtgaacaaactatacaaaatagataattattttatatacaa  c.123+1440

         .         .         .         .         .         .  g.41511
tttagaaatgaatattccctgcagcactgtgtgttgttctcaggcaacaaaaactttaga  c.123+1500

         .         .         .         .         .         .  g.41571
agagaccaaaggtaaaatcacattgaagaggatcctgttggtaccttttatggccccata  c.123+1560

         .         .         .         .         .         .  g.41631
gactttccttaaactatctatcacataatgaaggatctagtatataggtggaatacaata  c.123+1620

         .         .         .         .         .         .  g.41691
gaaataatgtctaataaatacttttattcaatttcacaaatcaacaactaggaaaataca  c.123+1680

         .         .         .         .         .         .  g.41751
gtatagactcatgaaacacaagtgacacagtcaagagtgatgtcctccatgccttgttgt  c.123+1740

         .         .         .         .         .         .  g.41811
caactttaagaaccatgcacaggagtctgatcacagaaccactgttctgggtatggtcct  c.123+1800

         .         .         .         .         .         .  g.41871
ggtgactggcaagctggtaaaatcttgaaatgctactaagcaagggtagatttggctagg  c.123+1860

         .         .         .         .         .         .  g.41931
acccaagggaacaggagcaggaataaatactaacctggtcaattggaaaatgtacaggaa  c.123+1920

         .         .         .         .         .         .  g.41991
aacatctgaaacaagtttagttatgaaaaatacacagtttcttccctcttagagagaggg  c.123+1980

         .         .         .         .         .         .  g.42051
gagaaaaagaaacaaagaatcaaagagaaccacaaagacgattacaaacttgaaatatga  c.123+2040

         .         .         .         .         .         .  g.42111
actttccaaagagccattaaagaaactgaaattactactcaggaaaaaacaggctgaatg  c.123+2100

         .         .         .         .         .         .  g.42171
agggttcattaattaatgtccttccggttatgaatgggctcatttatgggaaacaataac  c.123+2160

         .         .         .         .         .         .  g.42231
catctggtgtccatgattggtgaagttgagcaggaaaataaatgtaacacacaacatgag  c.123+2220

         .         .         .         .         .         .  g.42291
gatttatgaggctgataagcctgagaagaataatcatcacaatttttgagtactatatat  c.123+2280

         .         .         .         .         .         .  g.42351
gccataaagttcaccaaattgagaatgataggacctttattctagtcttttctacaataa  c.123+2340

         .         .         .         .         .         .  g.42411
attaaaccagtgtgatattagacaagttatgtatctctggacttagtttcctcatctata  c.123+2400

         .         .         .         .         .         .  g.42471
aagttagtatattgtgttaatgtaaaaatgaaggaaagataatggaactacaagcgtctt  c.123+2460

         .         .         .         .         .         .  g.42531
catattttttctctgctgtttactgcttgtatgaatttggacatattttatgccttggat  c.123+2520

         .         .         .         .         .         .  g.42591
tccttgcctataaaatggaagtaatagtagtagcatcctcatagatttgttgagaagatt  c.123+2580

         .         .         .         .         .         .  g.42651
aaataaatgtaaagcactcagaaaaatacctaattcaattggagatagttgttgtttttt  c.123+2640

         .         .         .         .         .         .  g.42711
gctgtcattactgtcatgtgcaagtaacagaagctaactctgactggctaagtataaaag  c.123+2700

         .         .         .         .         .         .  g.42771
agtttattaaaagggtactggttcacagaaactttagatgtggagaatccaattcaaggg  c.123+2760

         .         .         .         .         .         .  g.42831
taagcttttaagaacaaaacccaaaaccacatcacataattgtcatgataaggaaatgtt  c.123+2820

         .         .         .         .         .         .  g.42891
atctgccatcacagaatgctcaacattaaagtttgcaccatttgtggcttttgcatcaga  c.123+2880

         .         .         .         .         .         .  g.42951
actcaattttagtaagggaaaccatgattgtccatggtttagtaaaggaaaccatgattt  c.123+2940

         .         .         .         .         .         .  g.43011
tccaataaccatgatggccccagctgcaaggaaggctagaaaaatcaagtatctgtcatt  c.123+3000

         .         .         .         .         .         .  g.43071
tttaagttctataggagaaggcaatttttgcccagattccccaggtatataacaagttca  c.123+3060

         .         .         .         .         .         .  g.43131
aacgctcagtggccaaaattaactcagttcattcaatcttcatgctaagacttactgctt  c.123+3120

         .         .         .         .         .         .  g.43191
agaatgatttattgaggaaggttttgtggcttttatccaaggtcaagaagatggtagaca  c.123+3180

         .         .         .         .         .         .  g.43251
aaatctcttgaagactcaatggcttcatcatgaaggacttgaaatatctgtgataggagg  c.123+3240

         .         .         .   g.43282
aaatttccaagtactcttgacatataaactg  c.123+3271

--------------------- middle of intron ---------------------
                 g.43283      .         .         .           g.43313
                 c.124-3271  agtaactgggtaggctcagcatccaatatgt  c.124-3241

.         .         .         .         .         .           g.43373
aaattaaagccactggatttatagttagaattgtgtcctcaattgttaatttacataggt  c.124-3181

.         .         .         .         .         .           g.43433
gaagactttccacctatttgtatatgactctagagagacaacggtttgtaagtctttgga  c.124-3121

.         .         .         .         .         .           g.43493
aaaataaaagtttccagagtttaataaacattctctcatgaaaaacaaaaatctatattc  c.124-3061

.         .         .         .         .         .           g.43553
ttttagtctgaactattaatacatttgtgctgctggggagaatgcttcccttgaggaaga  c.124-3001

.         .         .         .         .         .           g.43613
catcagctaggagagaaaagagcagttataactgggctttatctattttaaactcctcaa  c.124-2941

.         .         .         .         .         .           g.43673
ctatgaaaatagtacctgacatattagcaacccagagcccaactgtcctttctgagtaat  c.124-2881

.         .         .         .         .         .           g.43733
ggacagctattctaaccccatgactaatgcccattgcctgtcttaaattgatctgaactt  c.124-2821

.         .         .         .         .         .           g.43793
ccattactggtacattccaagaccagcgggtggctcacagagcaaatctcccctactgag  c.124-2761

.         .         .         .         .         .           g.43853
tgaactacagggcatccctgaactggccagactctttacagtctcaaaaaatattctttg  c.124-2701

.         .         .         .         .         .           g.43913
gattttttttcaagtgtttataaaaaacaaagaaagacaattaatatgctttcttgccca  c.124-2641

.         .         .         .         .         .           g.43973
gttatttcagattgtaagcaggtaaatcttcctatatgcatcatatgcataaatagttgg  c.124-2581

.         .         .         .         .         .           g.44033
atggcatttttagcaattatagcaatcaagaaagttgaagatatatttaaacaggtcaat  c.124-2521

.         .         .         .         .         .           g.44093
ctgctggttgcctatttattttcaaactatcaaagctattcaaagcagaatttctggaat  c.124-2461

.         .         .         .         .         .           g.44153
taccattttactattatgagattaaagtttggtttcctcaacttgaagggtaaaaatacc  c.124-2401

.         .         .         .         .         .           g.44213
acccaatgtatagtaaacttataatctgttgaatgttacagacatcaaagatacataaaa  c.124-2341

.         .         .         .         .         .           g.44273
atgggctcagaagcatcattatcaccgaaatggaaagagtttgcccagggagaaggatgg  c.124-2281

.         .         .         .         .         .           g.44333
taatttggcaattcaggttgagtatcttttatccaaaatgcttaggaccagaagtatttt  c.124-2221

.         .         .         .         .         .           g.44393
ggatttcagacgtttttaattttagaatttttgcatatacattataaagatatcttggag  c.124-2161

.         .         .         .         .         .           g.44453
ttgggacccaaagtataaacacagaatacacttataattcatatataccttatacacata  c.124-2101

.         .         .         .         .         .           g.44513
gcttgaaggtaattttatacaatgcttttaacgatttcgtatacccatcacatgaggtca  c.124-2041

.         .         .         .         .         .           g.44573
ggtgtggaattttctacttgtggcatcatgttggcactgaaaagttttgaattttggatt  c.124-1981

.         .         .         .         .         .           g.44633
ttggggttagaaatatgagatatgttcttccaaatattttatgtaataaaatgatcggaa  c.124-1921

.         .         .         .         .         .           g.44693
attgaaaggattttaaattgcagtagagaatttgctatttaatggcatgatacatttttt  c.124-1861

.         .         .         .         .         .           g.44753
cataaataaggagttttttttttttttttgagacagagtcttgctctatcacccaggtgg  c.124-1801

.         .         .         .         .         .           g.44813
gagtgcagtgacaacatctcagttcactgcaacctctacttcctgggttcaagtgattct  c.124-1741

.         .         .         .         .         .           g.44873
catgcctcagactcccaagtagctggaattacaggcatgtgccaccatgtccagctaatt  c.124-1681

.         .         .         .         .         .           g.44933
tttgtatttttagtagagatggggtttcaccatgttggccaggctggtctcgaactccta  c.124-1621

.         .         .         .         .         .           g.44993
gactcaagccatccacccacctcagcctcccaaagtgctgggattacaggcataagccac  c.124-1561

.         .         .         .         .         .           g.45053
catgccagaccaataaggaatattttaatgtatgtatctgttataagtggcttccacgta  c.124-1501

.         .         .         .         .         .           g.45113
tcaaaggagcaaaatgcaaaaattaagctgatgaactttgatgcctgactgcctgggttc  c.124-1441

.         .         .         .         .         .           g.45173
aaattctggcttctccacttcccaaccatgtgaccttggcaaattaatttatctgggctt  c.124-1381

.         .         .         .         .         .           g.45233
tgataccttatgtaaatgggataataactgtccttaacccatgacattaagtaatgacag  c.124-1321

.         .         .         .         .         .           g.45293
agcagtatctgacatatagtaaatgctatataggtatttgtttgaaaagaagtaaataaa  c.124-1261

.         .         .         .         .         .           g.45353
taaaactcattaatgtctctgaaaatgtcaattgcacatttttaaggtaattcttggttg  c.124-1201

.         .         .         .         .         .           g.45413
agatataaaccactaaattaccaaggttttggggtttttttctataagcataagtatttc  c.124-1141

.         .         .         .         .         .           g.45473
aatttctcagatttctcagtgatatcaaagttttactaatggacaagaatattagggtaa  c.124-1081

.         .         .         .         .         .           g.45533
gaaaaaagtacaggaactctctaggcaaaaatttaaatattcaattagattttaaaaata  c.124-1021

.         .         .         .         .         .           g.45593
ctcagttgtttgaaacaaaaaaagtaatccaggcaaagtagaagactcatatgatatctt  c.124-961

.         .         .         .         .         .           g.45653
tttaagttattatttttaaaaaacgtggtatgaattattagaaataatgtgtgatcatga  c.124-901

.         .         .         .         .         .           g.45713
cccacagacaccacagatatgaattaaatactgtgatccaaagagcctttgtgctaacac  c.124-841

.         .         .         .         .         .           g.45773
ttacaaaatataattgagaaagactcaagttggtgtatatgaagatttaacagggacact  c.124-781

.         .         .         .         .         .           g.45833
acaagctgctttacttcaattttaaacaacagtcatacaaagcagtgtatttaaacaact  c.124-721

.         .         .         .         .         .           g.45893
aacatatgtcttttaaaaatatacatagaaaaatatttgaaaaggcctatgaaatttttg  c.124-661

.         .         .         .         .         .           g.45953
acagtaactacttctaaggatggtacagtgatacattggagaatttttctttttacttta  c.124-601

.         .         .         .         .         .           g.46013
catgtcactgtgttttttccacaacttgtatcattttatagcatgaaacttcttaaaata  c.124-541

.         .         .         .         .         .           g.46073
ttagttgtagaagttagtagtgaactcttgggctcaagggatccttctgcctcagtcaga  c.124-481

.         .         .         .         .         .           g.46133
gtaagttctattgttctatagcactgcaggatgactacgtttaacaataatatattatta  c.124-421

.         .         .         .         .         .           g.46193
atatgtagttgtaaatagctagaagaaggctattccttgtgttcccaacacaaagaaatg  c.124-361

.         .         .         .         .         .           g.46253
ataaatgtttgagatgatggatatactaattaccctgatctatttactctttaatgtggt  c.124-301

.         .         .         .         .         .           g.46313
aagaagatagatctcttaagtgttcttactcaatgaaattaaaaaagaaaaaaaaaatat  c.124-241

.         .         .         .         .         .           g.46373
ttgcctagcagtttacaagttttcacaatgtttatctcaagcaagctgctgaagcacaga  c.124-181

.         .         .         .         .         .           g.46433
gtgtggtactataatccacataaaaagctttaatttttctcctttaaccagtccactatt  c.124-121

.         .         .         .         .         .           g.46493
attacttgtcaatgataaatacattcattaatgtgaaattattttgaaaaatactcaggg  c.124-61

.         .         .         .         .         .           g.46553
aaattgaattaaagtcttgatcattttctcctctccttcacacctgccctggatttgcag  c.124-1


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