APOBEC1 complementation factor (A1CF) - 5549 nt intron 07 reference sequence

(intronic numbering for coding DNA Reference Sequence)


         .         .         .         .         .         .  g.48874
gtaagctccgcctcttctagattaaaagtgaaacaaacaatgcacctgtgtctgtttttc  c.389+60

         .         .         .         .         .         .  g.48934
tatcaagtttatctaatatggtgtatgccaaaaaaaaagccaagccagaaatgaaataga  c.389+120

         .         .         .         .         .         .  g.48994
ttagtatttttccttggcaaaaataaatttgattaaatatttattaatatcaatactata  c.389+180

         .         .         .         .         .         .  g.49054
tgaataccaaactaagttctatgagtgttcaaagaaacaaaacttaataatttgcctgtt  c.389+240

         .         .         .         .         .         .  g.49114
tcataaatatatattgggcactgttcaaaatattgggaatatatcaaggtataatttcct  c.389+300

         .         .         .         .         .         .  g.49174
acttgcagagcaaatatataagatcactcaaaatagtatgaaaaaatcaaaccagggatg  c.389+360

         .         .         .         .         .         .  g.49234
ggataaagttgtgtgagaaggtggctactctaatttggtgtatttaagaaaatactctct  c.389+420

         .         .         .         .         .         .  g.49294
ggcagagtgaaacttaatctgagacttgaatgaaaagagccagtcatgacagtcagacct  c.389+480

         .         .         .         .         .         .  g.49354
tgggaaggttatttcaggaaaggagagaacatcaagtataaagttcccgaagtgaaaaca  c.389+540

         .         .         .         .         .         .  g.49414
agcgtgatatgtttgaggggcagaaagcaagcccatgtggccggagagggtaaagagagg  c.389+600

         .         .         .         .         .         .  g.49474
aggactgaaagcaatacagttggagagctgtgcactgtgtgaggaagtgtagatgaagta  c.389+660

         .         .         .         .         .         .  g.49534
cagaagtctctgtggtgatgaatttgaattttcttctaatagaagggaggaaagagtttt  c.389+720

         .         .         .         .         .         .  g.49594
gattacatttatagttttttaaacattcctctgctgtttggttgagaatgtactatagca  c.389+780

         .         .         .         .         .         .  g.49654
ggtgaggtttgaaagaggacaccagttagaaggctgctgcagttgtctagatttggacaa  c.389+840

         .         .         .         .         .         .  g.49714
gagatggtggtagttggatgagggggtccatggtggacaagataagaaagggtgagatct  c.389+900

         .         .         .         .         .         .  g.49774
gggatatacacaaatctggctagagattggatttagactgagagagaattcagaattcag  c.389+960

         .         .         .         .         .         .  g.49834
ggaggaaacctaggattttggtccgagtatctgtgaacttgttagtgccattgcaatgga  c.389+1020

         .         .         .         .         .         .  g.49894
aaagactggaagaacagcagaggaaggaccttttagggcactttacatttgagatgcaca  c.389+1080

         .         .         .         .         .         .  g.49954
ttgaacatcccaggggaggtgttgagaaggtgactgtctgcattgtggtggagtcaggag  c.389+1140

         .         .         .         .         .         .  g.50014
acaggtcacagttggaatataaatttgggggtcagctaaatatagatagcaattaagacc  c.389+1200

         .         .         .         .         .         .  g.50074
atgggactaggggagagtcccatgtaattgactttgtgcaaccaattgcccgttttgata  c.389+1260

         .         .         .         .         .         .  g.50134
aactggaaataaaactgacatcatgaaattgtctgatttctaaaaccttcacttggagag  c.389+1320

         .         .         .         .         .         .  g.50194
agaaccgtcataaattctttcttaaaggaagccctgagccacgtgagaggaagattagtg  c.389+1380

         .         .         .         .         .         .  g.50254
cagcagttaaagagcaatagttttggagtcagccatgcttcatttgagtgccaccaagta  c.389+1440

         .         .         .         .         .         .  g.50314
acttcaccattctaagcctcaatttcctcatctataaaatggggataccatctatttcat  c.389+1500

         .         .         .         .         .         .  g.50374
aggtttattgctataacaactttacagtgcttaacccagtgtttggaacacagtgataag  c.389+1560

         .         .         .         .         .         .  g.50434
ccgacaaatgataaaaaaaaaaaaattgtattttagcacagttcatcaattctagatgca  c.389+1620

         .         .         .         .         .         .  g.50494
gtttttttttttacatcttatccccttctgaaagagaactgcaccttaaaatgggtagat  c.389+1680

         .         .         .         .         .         .  g.50554
cttaaatttgatgaatgcagaaagagcagatttaccacaattatttttctctcactttct  c.389+1740

         .         .         .         .         .         .  g.50614
ataggaccaaaagaagtcatacattatccttacagtctgtaaatcaattaactactggct  c.389+1800

         .         .         .         .         .         .  g.50674
tattttattaaaaattcctgggccggacacagtgactcacgcctgtaatcctagcacttt  c.389+1860

         .         .         .         .         .         .  g.50734
gggaggccaaggcgggcggatcacctgaggttgggagtttgagaccagcctgaccaacct  c.389+1920

         .         .         .         .         .         .  g.50794
ggagaaacctcatctctactaaaaatacaaaattagcagggcgtggtggcgcatgcctgt  c.389+1980

         .         .         .         .         .         .  g.50854
agtcccagctactcgggaggcaggagaattgcttgaacctggcagggtggagattgcagt  c.389+2040

         .         .         .         .         .         .  g.50914
gagccgagatcacaccactgctctccagcctgggcaagaagagcgaaactctgtctcaaa  c.389+2100

         .         .         .         .         .         .  g.50974
aaacaaacaaacaaacaacgccttagccacaggaagatcagttggattcggcaactactt  c.389+2160

         .         .         .         .         .         .  g.51034
gtagtctaaccattcaattccaaggctggattctagaaaagagtcttggagaaaacataa  c.389+2220

         .         .         .         .         .         .  g.51094
aggaggcttccctcccacaggtgcctccatggacccaaaagagctttgtgtagtatgtgg  c.389+2280

         .         .         .         .         .         .  g.51154
aggattgtttgcagtaggaatcaggagatctggggtccagcccaggttcctttggacgaa  c.389+2340

         .         .         .         .         .         .  g.51214
tgctttaacctctttgagcatcacttttatcattggcacctaaacacagagatgttctga  c.389+2400

         .         .         .         .         .         .  g.51274
gcattcaccatatgaaagaatatatactaaagtgctttgaaagggctacaaaacgctaca  c.389+2460

         .         .         .         .         .         .  g.51334
ttacagttttatgatttccagaattggaagtttcccccattccttggtctttcatggaac  c.389+2520

         .         .         .         .         .         .  g.51394
cttgacatcgtaacagtaagggttattcccaaaacggtatttgagttgagatagatatgg  c.389+2580

         .         .         .         .         .         .  g.51454
aattggctatgtagggaatcaagtggatttactgtatctacttaacacattgttacccaa  c.389+2640

         .         .         .         .         .         .  g.51514
tagggcctgtaaatacttttggacagcagataggatatgaataatgaataaaatcaatcc  c.389+2700

         .         .         .         .         .         .  g.51574
actacggccactgataattaacagtatcctctgtgaattttagtgtctttgtctgtgaaa  c.389+2760

         .       g.51589
tagagataaaaatat  c.389+2775

--------------------- middle of intron ---------------------
                                  g.51590         .           g.51603
                                  c.390-2774  acctacctcatgag  c.390-2761

.         .         .         .         .         .           g.51663
gtgttttgaaaaataaatgagataatatacatacatctcagtgctgacacatactaggtg  c.390-2701

.         .         .         .         .         .           g.51723
ctctatgaatgtttgcagaaggttatggtggtgatgatggaggaggagaagggaaaagaa  c.390-2641

.         .         .         .         .         .           g.51783
aaggaaaaatatgacagaaattaggaagagaaagttactggccaaaattccagtcaaagc  c.390-2581

.         .         .         .         .         .           g.51843
acaggttggatgccagaagcaaggtaaaggcagagtgttaccttaaaaattagggggtag  c.390-2521

.         .         .         .         .         .           g.51903
aataaacggaataagacaagccagaataaacaccccatagacaacctcacctacttgcac  c.390-2461

.         .         .         .         .         .           g.51963
tctgccttgggtcagtcctgccagggaaagaacttttgttgcagagaagaaaccttcaat  c.390-2401

.         .         .         .         .         .           g.52023
ttgcttttatccaccatttctcacccacctatcattatatcagcttctacttcatcagat  c.390-2341

.         .         .         .         .         .           g.52083
attcactgatcgtcatctaaatgtctggcttctagagacattaaagttgtggcctcagct  c.390-2281

.         .         .         .         .         .           g.52143
tttgaaaggagatggctctttgtctccaaataattccgggaaaggtgcctgacaaaccac  c.390-2221

.         .         .         .         .         .           g.52203
aaccatttaaaaataaaatatggaattctaggctcctcctgctggtaactgatatatgac  c.390-2161

.         .         .         .         .         .           g.52263
cagccccctaactatcaaaaataatataatttctaaatacattaatactgtggaaaacaa  c.390-2101

.         .         .         .         .         .           g.52323
ggttttggtgttttcttttttaagtaaagtttaaaaaaaaacttggaagattattttttc  c.390-2041

.         .         .         .         .         .           g.52383
aacccttccctcaccttgagaaccacactcctggcacaattcttactagactgagatgga  c.390-1981

.         .         .         .         .         .           g.52443
cctgtcacagatctgacacacggtccttggttcttcagcaaagcgtaggagacagctagg  c.390-1921

.         .         .         .         .         .           g.52503
acagtggcctaaccctggtcagaaaacctgccacacaaccaagagccattcgctccatgg  c.390-1861

.         .         .         .         .         .           g.52563
atatcagaccaatcgcccactcacctggctgagagcttttattcatggcaaatgggtcgt  c.390-1801

.         .         .         .         .         .           g.52623
ttctgctaagcatacttcacccatttttaataacttagtgttattacaaaagtcatatag  c.390-1741

.         .         .         .         .         .           g.52683
cctaatatgtaacacatggaaaacatcaaaaagcataaagtaataaaagttaaaaccatt  c.390-1681

.         .         .         .         .         .           g.52743
tctccgcaactccattgccccaaaataaccactatgttgatattttattgtctttccaga  c.390-1621

.         .         .         .         .         .           g.52803
tttttctaaacatttttaatcaaaatggccttcacatatacttattttatagccttttaa  c.390-1561

.         .         .         .         .         .           g.52863
agcctagcagccaattgtgaactgtttttttaaaccaatatatattcttctacgttactc  c.390-1501

.         .         .         .         .         .           g.52923
tttttaacgactgcagagcgtgcaatggtatgaatgcctgtcttttgtttaccagtgatt  c.390-1441

.         .         .         .         .         .           g.52983
ctcaatcaggagcagtactgtccacccaagggggcatttagaaaggtggggaggcacttt  c.390-1381

.         .         .         .         .         .           g.53043
tgaatgatcagattggtcactattggcatgtagtacgcaagaactagagatggtaaacgt  c.390-1321

.         .         .         .         .         .           g.53103
actacagtatgcaatgagaaaatgtccaatccaaagccagtaacatctcagttgagagac  c.390-1261

.         .         .         .         .         .           g.53163
attaaaccagttctttaccgtgaggtattttgctcatttccaatttgggggagattttaa  c.390-1201

.         .         .         .         .         .           g.53223
agagcagtaataaatatccttaaacataaattctagggctcacttttattttccagggac  c.390-1141

.         .         .         .         .         .           g.53283
atattcccagaagatactttatttggtcaaaggttgtgcacacttaagacttttgataca  c.390-1081

.         .         .         .         .         .           g.53343
ttttgccaaatgttctccagaatagtttaatccatgtgtactctgccagtgaaggtgtac  c.390-1021

.         .         .         .         .         .           g.53403
atacctcaacttgctaagaagcaactctgtacagtggaagaaacaggaactgagatccca  c.390-961

.         .         .         .         .         .           g.53463
cagctaggtttcattccttaaaatctataacattttaagcaagtctttttatttcttgga  c.390-901

.         .         .         .         .         .           g.53523
gtttcaagttcatctgtaaatggaaataacttctactctgccgatctcacagtctttttg  c.390-841

.         .         .         .         .         .           g.53583
tgtggggcagataaggtcatatgtgaaaatgtgttcaagtataaaagactgtttttaaca  c.390-781

.         .         .         .         .         .           g.53643
gagatcacatcagaacagcttttctctttggctacaaaagaaaaggaatgtcaggtgttg  c.390-721

.         .         .         .         .         .           g.53703
caaactcaagcgactgcagggccaggcaggtggcttcagtaacctgggttaggtgtaggg  c.390-661

.         .         .         .         .         .           g.53763
acctcagtgttggggatgcttcagggagcggtgaggattgacaactcttgaatccacatc  c.390-601

.         .         .         .         .         .           g.53823
tagcctaaagaaagcagatgctatgcagccatgaaaaaggatgagttcatgtcctttgta  c.390-541

.         .         .         .         .         .           g.53883
gggacatggatgaaactggaaaccatcattctcagcaaactatcgcaaggacaaaaaacc  c.390-481

.         .         .         .         .         .           g.53943
aaacactgcatgttctcactcataggtgggaattgaacaatgagaacacttggacacagg  c.390-421

.         .         .         .         .         .           g.54003
aaggggaacattacacaccagggcctgttgtggggtggggggaggggggagggatagcat  c.390-361

.         .         .         .         .         .           g.54063
taggagatatacctaatgcaaatgacgagttaatgggtgcagcacaccaacatggcacat  c.390-301

.         .         .         .         .         .           g.54123
gtatacatatgtaacaaacctgcatgttgtgcacatgtaccctagaacttaaagtaaaat  c.390-241

.         .         .         .         .         .           g.54183
aaaataaaaaaagaaagcagatgctactcagcttcagataacttttttgtttgaaaatgt  c.390-181

.         .         .         .         .         .           g.54243
agagcacatgttgacacatctaataatcttgcaaaagaagccacaactctccaaaaatgg  c.390-121

.         .         .         .         .         .           g.54303
tttcaacactatgaacccaaacatcccacatcttcaggcaacatttggcccacagccata  c.390-61

.         .         .         .         .         .           g.54363
cattttcaacctgaatcctacaaggattctcatcaatcaaaatccctgctctttttgcag  c.390-1


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