ATP-binding cassette, sub-family A (ABC1), member 1 (ABCA1) - 1086 nt intron 40 reference sequence

(intronic numbering for coding DNA Reference Sequence)
         .         .         .         .         .         .  g.138920
gtgagtgaagcagtggctgtaggatgctttaatggagatggcactctgcataggccttgg  c.5506+60

         .         .         .         .         .         .  g.138980
taccctgaactttgttttggaaagaagcaggtgactaagcacaggatgttcccccacccc  c.5506+120

         .         .         .         .         .         .  g.139040
catgcccagtgacagggctcatgccaacacagctggttgtggcatgggttttgtgacaca  c.5506+180

         .         .         .         .         .         .  g.139100
accatttgtctgtgtctctgatagcattgagaaaagtgaaagggcagttttgaaggtaag  c.5506+240

         .         .         .         .         .         .  g.139160
gaaaatagtggcatttgcttggatccactggctcatgccactgtctgggttggttagaag  c.5506+300

         .         .         .         .         .         .  g.139220
cactggaaaagtcaaaccataactttgagaattaggtgatcagggaatcagaaggaaaga  c.5506+360

         .         .         .         .         .         .  g.139280
tgcaaactttggctcttttaggcgaatcatgtgcctgcagatgaggtcatttattatctt  c.5506+420

         .         .         .         .         .         .  g.139340
ttacacagtctataaaattataatgtattacatctttttctacctttagaatggttaaaa  c.5506+480

         .         .         .         .         .         .  g.139400
atatttctccggtagccatatgattattattcatccattagataatatagtcaaatgggc  c.5506+540

     g.139403
cat  c.5506+543

--------------------- middle of intron ---------------------
                                             g.139404         g.139406
                                             c.5507-543  gtt  c.5507-541

.         .         .         .         .         .           g.139466
atttactgttcatagaagaggggctttttgcaacttgggctacaaaggagatatgtaagg  c.5507-481

.         .         .         .         .         .           g.139526
aatttaaggaatggttacatggaactagatttaattgaatctagtggtttaattgattca  c.5507-421

.         .         .         .         .         .           g.139586
ctaggatatatgctactgaaaggggaatctgcttaaagtgctttctgatatttattatta  c.5507-361

.         .         .         .         .         .           g.139646
ctaaaacttagaatttattaaaaatactgactgtgaaaattacttgggtcgtttgccttt  c.5507-301

.         .         .         .         .         .           g.139706
ttaaaaggatttttggcatgtctcattaaaaaaagaaatactagatatcttcagtgaagt  c.5507-241

.         .         .         .         .         .           g.139766
tacaaatcgaatacacattggctctgaaattctgattgatactgggtcataaaaagtttt  c.5507-181

.         .         .         .         .         .           g.139826
cccaaatcagacttggaaagtgatcactctcttgttactcttttttccttgtcatgggtg  c.5507-121

.         .         .         .         .         .           g.139886
atagccatttgtgtttattggaagatcggtgaattttaaggaacataggcccaaatttga  c.5507-61

.         .         .         .         .         .           g.139946
ggaagggccatggtttttgatccctccattctgaccggatctctgcattgtgtctactag  c.5507-1