activation-induced cytidine deaminase (AICDA) - 5747 nt intron 01 reference sequence

(intronic numbering for coding DNA Reference Sequence)


         .         .         .         .         .         .  g.5147
gtaaagaggcagtcttctcgtgggtgattgcactggccttcctctcagagcaaatctgag  c.8+60

         .         .         .         .         .         .  g.5207
taatgagactggtagctatccctttctctcatgtaactgtctgactgataagatcagctt  c.8+120

         .         .         .         .         .         .  g.5267
gatcaatatgcatatatattttttgatctgtctccttttcttctattcagatcttatacg  c.8+180

         .         .         .         .         .         .  g.5327
ctgtcagcccaattctttctgtttcagacttctcttgatttccctctttttcatgtggca  c.8+240

         .         .         .         .         .         .  g.5387
aaagaagtagtgcgtacaatgtactgattcgtcctgagatttgtaccatggttgaaacta  c.8+300

         .         .         .         .         .         .  g.5447
atttatggtaataatattaacatagcaaatctttagagactcaaatcatgaaaaggtaat  c.8+360

         .         .         .         .         .         .  g.5507
agcagtactgtactaaaaacggtagtgctaattttcgtaataattttgtaaatattcaac  c.8+420

         .         .         .         .         .         .  g.5567
agtaaaacaacttgaagacacactttcctagggaggcgttactgaaataatttagctata  c.8+480

         .         .         .         .         .         .  g.5627
gtaagaaaatttgtaattttagaaatgccaagcattctaaattaattgcttgaaagtcac  c.8+540

         .         .         .         .         .         .  g.5687
tatgattgtgtccattataaggagacaaattcattcaagcaagttatttaatgttaaagg  c.8+600

         .         .         .         .         .         .  g.5747
cccaattgttaggcagttaatggcacttttactattaactaatctttccatttgttcaga  c.8+660

         .         .         .         .         .         .  g.5807
cgtagcttaacttacctcttaggtgtgaatttggttaaggtcctcataatgtctttatgt  c.8+720

         .         .         .         .         .         .  g.5867
gcagtttttgataggttattgtcatagaacttattctattcctacatttatgattactat  c.8+780

         .         .         .         .         .         .  g.5927
ggatgtatgagaataacacctaatccttatactttacctcaatttaactcctttataaag  c.8+840

         .         .         .         .         .         .  g.5987
aacttacattacagaataaagattttttaaaaatatatttttttgtagagacagggtctt  c.8+900

         .         .         .         .         .         .  g.6047
agcccagccgaggctggtctctaagtcctggcccaagcgatcctcctgcctgggcctcct  c.8+960

         .         .         .         .         .         .  g.6107
aaagtgctggaattatagacatgagccatcacatccaatatacagaataaagatttttaa  c.8+1020

         .         .         .         .         .         .  g.6167
tggaggatttaatgttcttcagaaaattttcttgaggtcagacaatgtcaaatgtctcct  c.8+1080

         .         .         .         .         .         .  g.6227
cagtttacactgagattttgaaaacaagtctgagctataggtccttgtgaagggtccatt  c.8+1140

         .         .         .         .         .         .  g.6287
ggaaatacttgttcaaagtaaaatggaaagcaaaggtaaaatcagcagttgaaattcaga  c.8+1200

         .         .         .         .         .         .  g.6347
gaaagacagaaaaggagaaaagatgaaattcaacaggacagaagggaaatatattatcat  c.8+1260

         .         .         .         .         .         .  g.6407
taaggaggacagtatctgtagagctcattagtgatggcaaaatgacttggtcaggattat  c.8+1320

         .         .         .         .         .         .  g.6467
ttttaacccgcttgtttctggtttgcacggctggggatgcagctagggttctgcctcagg  c.8+1380

         .         .         .         .         .         .  g.6527
gagcacagctgtccagagcagctgtcagcctgcaagcctgaaacactccctcggtaaagt  c.8+1440

         .         .         .         .         .         .  g.6587
ccttcctactcaggacagaaatgacgagaacagggagctggaaacaggcccctaaccaga  c.8+1500

         .         .         .         .         .         .  g.6647
gaagggaagtaatggatcaacaaagttaactagcaggtcaggatcacgcaattcatttca  c.8+1560

         .         .         .         .         .         .  g.6707
ctctgactggtaacatgtgacagaaacagtgtaggcttattgtattttcatgtagagtag  c.8+1620

         .         .         .         .         .         .  g.6767
gacccaaaaatccacccaaagtcctttatctatgccacatccttcttatctatacttcca  c.8+1680

         .         .         .         .         .         .  g.6827
ggacactttttcttccttatgataaggctctctctctctccacacacacacacacacaca  c.8+1740

         .         .         .         .         .         .  g.6887
cacacacacacacacacacacacacaaacacacaccccgccaaccaaggtgcatgtaaaa  c.8+1800

         .         .         .         .         .         .  g.6947
agatgtagattcctctgcctttctcatctacacagcccaggagggtaagttaatataaga  c.8+1860

         .         .         .         .         .         .  g.7007
gggatttattggtaagagatgatgcttaatctgtttaacactgggcctcaaagagagaat  c.8+1920

         .         .         .         .         .         .  g.7067
ttcttttcttctgtacttattaagcacctattatgtgttgagcttatatatacaaagggt  c.8+1980

         .         .         .         .         .         .  g.7127
tattatatgctaatatagtaatagtaatggtggttggtactatggtaattaccataaaaa  c.8+2040

         .         .         .         .         .         .  g.7187
ttattatccttttaaaataaagctaattattattggatcttttttagtattcattttatg  c.8+2100

         .         .         .         .         .         .  g.7247
ttttttatgtttttgattttttaaaagacaatctcaccctgttacccaggctggagtgca  c.8+2160

         .         .         .         .         .         .  g.7307
gtggtgcaatcatagctttctgcagtcttgaactcctgggctcaagcaatcctcctgcct  c.8+2220

         .         .         .         .         .         .  g.7367
tggcctcccaaagtgttgggatacagtcatgagccactgcatctggcctaggatccattt  c.8+2280

         .         .         .         .         .         .  g.7427
agattaaaatatgcattttaaattttaaaataatatggctaatttttaccttatgtaatg  c.8+2340

         .         .         .         .         .         .  g.7487
tgtatactggcaataaatctagtttgctgcctaaagtttaaagtgctttccagtaagctt  c.8+2400

         .         .         .         .         .         .  g.7547
catgtacgtgaggggagacatttaaagtgaaacagacagccaggtgtggtggctcacgcc  c.8+2460

         .         .         .         .         .         .  g.7607
tgtaatcccagcactctgggaggctgaggtgggtggatcgcttgagccctggagttcaag  c.8+2520

         .         .         .         .         .         .  g.7667
accagcctgagcaacatggcaaaacgctgtttctataacaaaaattagccgggcatggtg  c.8+2580

         .         .         .         .         .         .  g.7727
gcatgtgcctgtggtcccagctactagggggctgaggcaggagaatcgttggagcccagg  c.8+2640

         .         .         .         .         .         .  g.7787
aggtcaaggctgcactgagcagtgcttgcgccactgcactccagcctgggtgacaggacc  c.8+2700

         .         .         .         .         .         .  g.7847
agaccttgcctcaaaaaaataagaagaaaaattaaaaataaatggaaacaactacaaaga  c.8+2760

         .         .         .         .         .         .  g.7907
gctgttgtcctagatgagctacttagttaggctgatattttggtatttaacttttaaagt  c.8+2820

         .         .         .         .         .      g.7961
cagggtctgtcacctgcactacattattaaaatatcaattctcaatgtatatcc  c.8+2874

--------------------- middle of intron ---------------------
          .         .         .         .         .           g.8014
       acacaaagactggtacgtgaatgttcatagtacctttattcacaaaaccccaa  c.9-2821

.         .         .         .         .         .           g.8074
agtagagactatccaaatatccatcaacaagtgaacaaataaacaaaatgtgctatatcc  c.9-2761

.         .         .         .         .         .           g.8134
atgcaatggaataccaccctgcagtacaaagaagctacttggggatgaatcccaaagtca  c.9-2701

.         .         .         .         .         .           g.8194
tgacgctaaatgaaagagtcagacatgaaggaggagataatgtatgccatacgaaattct  c.9-2641

.         .         .         .         .         .           g.8254
agaaaatgaaagtaacttatagttacagaaagcaaatcagggcaggcatagaggctcaca  c.9-2581

.         .         .         .         .         .           g.8314
cctgtaatcccagcactttgagaggccacgtgggaagattgctagaactcaggagttcaa  c.9-2521

.         .         .         .         .         .           g.8374
gaccagcctgggcaacacagtgaaactccattctccacaaaaatgggaaaaaaagaaagc  c.9-2461

.         .         .         .         .         .           g.8434
aaatcagtggttgtcctgtggggaggggaaggactgcaaagagggaagaagctctggtgg  c.9-2401

.         .         .         .         .         .           g.8494
ggtgagggtggtgattcaggttctgtatcctgactgtggtagcagtttggggtgtttaca  c.9-2341

.         .         .         .         .         .           g.8554
tccaaaaatattcgtagaattatgcatcttaaatgggtggagtttactgtatgtaaatta  c.9-2281

.         .         .         .         .         .           g.8614
tacctcaatgtaagaaaaaataatgtgtaagaaaactttcaattctcttgccagcaaacg  c.9-2221

.         .         .         .         .         .           g.8674
ttattcaaattcctgagccctttacttcgcaaattctctgcacttctgccccgtaccatt  c.9-2161

.         .         .         .         .         .           g.8734
aggtgacagcactagctccacaaattggataaatgcatttctggaaaagactagggacaa  c.9-2101

.         .         .         .         .         .           g.8794
aatccaggcatcacttgtgctttcatatcaaccatgctgtacagcttgtgttgctgtctg  c.9-2041

.         .         .         .         .         .           g.8854
cagctgcaatggggactcttgatttctttaaggaaacttgggttaccagagtatttccac  c.9-1981

.         .         .         .         .         .           g.8914
aaatgctattcaaattagtgcttatgatatgcaagacactgtgctaggagccagaaaaca  c.9-1921

.         .         .         .         .         .           g.8974
aagaggaggagaaatcagtcattatgtgggaacaacatagcaagatatttagatcatttt  c.9-1861

.         .         .         .         .         .           g.9034
gactagttaaaaaagcagcagagtacaaaatcacacatgcaatcagtataatccaaatca  c.9-1801

.         .         .         .         .         .           g.9094
tgtaaatatgtgcctgtagaaagactagaggaataaacacaagaatcttaacagtcattg  c.9-1741

.         .         .         .         .         .           g.9154
tcattagacactaagtctaattattattattagacactatgatatttgagatttaaaaaa  c.9-1681

.         .         .         .         .         .           g.9214
tctttaatattttaaaatttagagctcttctatttttccatagtattcaagtttgacaat  c.9-1621

.         .         .         .         .         .           g.9274
gatcaagtattactctttctttttttttttttttttttttttttgagatggagttttggt  c.9-1561

.         .         .         .         .         .           g.9334
cttgttgcccatgctggagtggaatggcatgaccatagctcactgcaacctccacctcct  c.9-1501

.         .         .         .         .         .           g.9394
gggttcaagcaaagctgtcgcctcagcctcccgggtagatgggattacaggcgcccacca  c.9-1441

.         .         .         .         .         .           g.9454
ccacactcggctaatgtttgtatttttagtagagatggggtttcaccatgttggccaggc  c.9-1381

.         .         .         .         .         .           g.9514
tggtctcaaactcctgacctcagaggatccacctgcctcagcctcccaaagtgctgggat  c.9-1321

.         .         .         .         .         .           g.9574
tacagatgtaggccactgcgcccggccaagtattgctcttatacattaaaaaacaggtgt  c.9-1261

.         .         .         .         .         .           g.9634
gagccactgcgcccagccaggtattgctcttatacattaaaaaataggccggtgcagtgg  c.9-1201

.         .         .         .         .         .           g.9694
ctcacgcctgtaatcccagcactttgggaagccaaggcgggcagaacacccgaggtcagg  c.9-1141

.         .         .         .         .         .           g.9754
agtccaaggccagcctggccaagatggtgaaaccccgtctctattaaaaatacaaacatt  c.9-1081

.         .         .         .         .         .           g.9814
acctgggcatgatggtgggcgcctgtaatcccagctactcaggaggctgaggcaggagga  c.9-1021

.         .         .         .         .         .           g.9874
tccgcggagcctggcagatctgcctgagcctgggaggttgaggctacagtaagccaagat  c.9-961

.         .         .         .         .         .           g.9934
catgccagtatacttcagcctgggcgacaaagtgagaccgtaacaaaaaaaaaaaaattt  c.9-901

.         .         .         .         .         .           g.9994
aaaaaaagaaatttagatcaagatccaactgtaaaaagtggcctaaacaccacattaaag  c.9-841

.         .         .         .         .         .           g.10054
agtttggagtttattctgcaggcagaagagaaccatcagggggtcttcagcatgggaatg  c.9-781

.         .         .         .         .         .           g.10114
gcatggtgcacctggtttttgtgagatcatggtggtgacagtgtggggaatgttattttg  c.9-721

.         .         .         .         .         .           g.10174
gagggactggaggcagacagaccggttaaaaggccagcacaacagataaggaggaagaag  c.9-661

.         .         .         .         .         .           g.10234
atgagggcttggaccgaagcagagaagagcaaacagggaaggtacaaattcaagaaatat  c.9-601

.         .         .         .         .         .           g.10294
tggggggtttgaatcaacacatttagatgattaattaaatatgaggactgaggaataaga  c.9-541

.         .         .         .         .         .           g.10354
aatgagtcaaggatggttccaggctgctaggctgcttacctgaggtggcaaagtcgggag  c.9-481

.         .         .         .         .         .           g.10414
gagtggcagtttaggacagggggcagttgaggaatattgttttgatcattttgagtttga  c.9-421

.         .         .         .         .         .           g.10474
ggtacaagttggacacttaggtaaagactggaggggaaatctgaatatacaattatggga  c.9-361

.         .         .         .         .         .           g.10534
ctgaggaacaagtttattttattttttgtttcgttttcttgttgaagaacaaatttaatt  c.9-301

.         .         .         .         .         .           g.10594
gtaatcccaagtcatcagcatctagaagacagtggcaggaggtgactgtcttgtgggtaa  c.9-241

.         .         .         .         .         .           g.10654
gggtttggggtccttgatgagtatctctcaattggccttaaatataagcaggaaaaggag  c.9-181

.         .         .         .         .         .           g.10714
tttatgatggattccaggctcagcagggctcaggagggctcaggcagccagcagaggaag  c.9-121

.         .         .         .         .         .           g.10774
tcagagcatcttctttggtttagcccaagtaatgacttccttaaaaagctgaaggaaaat  c.9-61

.         .         .         .         .         .           g.10834
ccagagtgaccagattataaactgtactcttgcattttctctccctcctctcacccacag  c.9-1


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