(used for variant description)
(last modified November 11, 2013)
This file was created to facilitate the description of sequence variants
on transcript NM_007294.3 in the BRCA1 gene based on a coding DNA
reference sequence following the
HGVS recommendations. The sequence was taken from NG_005905.2,
covering BRCA1 transcript NM_007294.3.
NOTE: exon
numbering skips exon 4.
(upstream sequence)
. . . . . g.5052
gtaccttgatttcgtattctgagaggctgctgcttagcggtagccccttggt c.-181
. . . . . . g.5112
ttccgtggcaacggaaaagcgcgggaattacagataaattaaaactgcgactgcgcggcg c.-121
. . . . . . g.5172
tgagctcgctgagacttcctggacgggggacaggctgtggggtttctcagataactgggc c.-61
. . . . . | 02 . g.6387
ccctgcgctcaggaggccttcaccctctgctctgggtaaag | ttcattggaacagaaagaa c.-1
. . . . . . g.6447
ATGGATTTATCTGCTCTTCGCGTTGAAGAAGTACAAAATGTCATTAATGCTATGCAGAAA c.60
M D L S A L R V E E V Q N V I N A M Q K p.20
. . | 03 . . . . g.14744
ATCTTAGAGTGTCCCATCTG | TCTGGAGTTGATCAAGGAACCTGTCTCCACAAAGTGTGAC c.120
I L E C P I C | L E L I K E P V S T K C D p.40
. | 05 . . . . . g.23996
CACATATTTTGCAA | ATTTTGCATGCTGAAACTTCTCAACCAGAAGAAAGGGCCTTCACAG c.180
H I F C K | F C M L K L L N Q K K G P S Q p.60
. . . | 06 . . . g.25555
TGTCCTTTATGTAAGAATGATATAACCAAAAG | GAGCCTACAAGAAAGTACGAGATTTAGT c.240
C P L C K N D I T K R | S L Q E S T R F S p.80
. . . . . . g.25615
CAACTTGTTGAAGAGCTATTGAAAATCATTTGTGCTTTTCAGCTTGACACAGGTTTGGAG c.300
Q L V E E L L K I I C A F Q L D T G L E p.100
| 07 . . . . . . g.26281
T | ATGCAAACAGCTATAATTTTGCAAAAAAGGAAAATAACTCTCCTGAACATCTAAAAGAT c.360
Y | A N S Y N F A K K E N N S P E H L K D p.120
. . . . . . g.26341
GAAGTTTCTATCATCCAAAGTATGGGCTACAGAAACCGTGCCAAAAGACTTCTACAGAGT c.420
E V S I I Q S M G Y R N R A K R L L Q S p.140
. . | 08 . . . . g.30642
GAACCCGAAAATCCTTCCTTG | CAGGAAACCAGTCTCAGTGTCCAACTCTCTAACCTTGGA c.480
E P E N P S L | Q E T S L S V Q L S N L G p.160
. . . . . . g.30702
ACTGTGAGAACTCTGAGGACAAAGCAGCGGATACAACCTCAAAAGACGTCTGTCTACATT c.540
T V R T L R T K Q R I Q P Q K T S V Y I p.180
| 09. . . . . | 10 . g.34568
GAATTGG | GATCTGATTCTTCTGAAGATACCGTTAATAAGGCAACTTATTGCAG | TGTGGGA c.600
E L G | S D S S E D T V N K A T Y C S | V G p.200
. . . . . . g.34628
GATCAAGAATTGTTACAAATCACCCCTCAAGGAACCAGGGATGAAATCAGTTTGGATTCT c.660
D Q E L L Q I T P Q G T R D E I S L D S p.220
. | 11 . . . . . g.35673
GCAAAAAAGG | CTGCTTGTGAATTTTCTGAGACGGATGTAACAAATACTGAACATCATCAA c.720
A K K A | A C E F S E T D V T N T E H H Q p.240
. . . . . . g.35733
CCCAGTAATAATGATTTGAACACCACTGAGAAGCGTGCAGCTGAGAGGCATCCAGAAAAG c.780
P S N N D L N T T E K R A A E R H P E K p.260
. . . . . . g.35793
TATCAGGGTAGTTCTGTTTCAAACTTGCATGTGGAGCCATGTGGCACAAATACTCATGCC c.840
Y Q G S S V S N L H V E P C G T N T H A p.280
. . . . . . g.35853
AGCTCATTACAGCATGAGAACAGCAGTTTATTACTCACTAAAGACAGAATGAATGTAGAA c.900
S S L Q H E N S S L L L T K D R M N V E p.300
. . . . . . g.35913
AAGGCTGAATTCTGTAATAAAAGCAAACAGCCTGGCTTAGCAAGGAGCCAACATAACAGA c.960
K A E F C N K S K Q P G L A R S Q H N R p.320
. . . . . . g.35973
TGGGCTGGAAGTAAGGAAACATGTAATGATAGGCGGACTCCCAGCACAGAAAAAAAGGTA c.1020
W A G S K E T C N D R R T P S T E K K V p.340
. . . . . . g.36033
GATCTGAATGCTGATCCCCTGTGTGAGAGAAAAGAATGGAATAAGCAGAAACTGCCATGC c.1080
D L N A D P L C E R K E W N K Q K L P C p.360
. . . . . . g.36093
TCAGAGAATCCTAGAGATACTGAAGATGTTCCTTGGATAACACTAAATAGCAGCATTCAG c.1140
S E N P R D T E D V P W I T L N S S I Q p.380
. . . . . . g.36153
AAAGTTAATGAGTGGTTTTCCAGAAGTGATGAACTGTTAGGTTCTGATGACTCACATGAT c.1200
K V N E W F S R S D E L L G S D D S H D p.400
. . . . . . g.36213
GGGGAGTCTGAATCAAATGCCAAAGTAGCTGATGTATTGGACGTTCTAAATGAGGTAGAT c.1260
G E S E S N A K V A D V L D V L N E V D p.420
. . . . . . g.36273
GAATATTCTGGTTCTTCAGAGAAAATAGACTTACTGGCCAGTGATCCTCATGAGGCTTTA c.1320
E Y S G S S E K I D L L A S D P H E A L p.440
. . . . . . g.36333
ATATGTAAAAGTGAAAGAGTTCACTCCAAATCAGTAGAGAGTAATATTGAAGACAAAATA c.1380
I C K S E R V H S K S V E S N I E D K I p.460
. . . . . . g.36393
TTTGGGAAAACCTATCGGAAGAAGGCAAGCCTCCCCAACTTAAGCCATGTAACTGAAAAT c.1440
F G K T Y R K K A S L P N L S H V T E N p.480
. . . . . . g.36453
CTAATTATAGGAGCATTTGTTACTGAGCCACAGATAATACAAGAGCGTCCCCTCACAAAT c.1500
L I I G A F V T E P Q I I Q E R P L T N p.500
. . . . . . g.36513
AAATTAAAGCGTAAAAGGAGACCTACATCAGGCCTTCATCCTGAGGATTTTATCAAGAAA c.1560
K L K R K R R P T S G L H P E D F I K K p.520
. . . . . . g.36573
GCAGATTTGGCAGTTCAAAAGACTCCTGAAATGATAAATCAGGGAACTAACCAAACGGAG c.1620
A D L A V Q K T P E M I N Q G T N Q T E p.540
. . . . . . g.36633
CAGAATGGTCAAGTGATGAATATTACTAATAGTGGTCATGAGAATAAAACAAAAGGTGAT c.1680
Q N G Q V M N I T N S G H E N K T K G D p.560
. . . . . . g.36693
TCTATTCAGAATGAGAAAAATCCTAACCCAATAGAATCACTCGAAAAAGAATCTGCTTTC c.1740
S I Q N E K N P N P I E S L E K E S A F p.580
. . . . . . g.36753
AAAACGAAAGCTGAACCTATAAGCAGCAGTATAAGCAATATGGAACTCGAATTAAATATC c.1800
K T K A E P I S S S I S N M E L E L N I p.600
. . . . . . g.36813
CACAATTCAAAAGCACCTAAAAAGAATAGGCTGAGGAGGAAGTCTTCTACCAGGCATATT c.1860
H N S K A P K K N R L R R K S S T R H I p.620
. . . . . . g.36873
CATGCGCTTGAACTAGTAGTCAGTAGAAATCTAAGCCCACCTAATTGTACTGAATTGCAA c.1920
H A L E L V V S R N L S P P N C T E L Q p.640
. . . . . . g.36933
ATTGATAGTTGTTCTAGCAGTGAAGAGATAAAGAAAAAAAAGTACAACCAAATGCCAGTC c.1980
I D S C S S S E E I K K K K Y N Q M P V p.660
. . . . . . g.36993
AGGCACAGCAGAAACCTACAACTCATGGAAGGTAAAGAACCTGCAACTGGAGCCAAGAAG c.2040
R H S R N L Q L M E G K E P A T G A K K p.680
. . . . . . g.37053
AGTAACAAGCCAAATGAACAGACAAGTAAAAGACATGACAGCGATACTTTCCCAGAGCTG c.2100
S N K P N E Q T S K R H D S D T F P E L p.700
. . . . . . g.37113
AAGTTAACAAATGCACCTGGTTCTTTTACTAAGTGTTCAAATACCAGTGAACTTAAAGAA c.2160
K L T N A P G S F T K C S N T S E L K E p.720
. . . . . . g.37173
TTTGTCAATCCTAGCCTTCCAAGAGAAGAAAAAGAAGAGAAACTAGAAACAGTTAAAGTG c.2220
F V N P S L P R E E K E E K L E T V K V p.740
. . . . . . g.37233
TCTAATAATGCTGAAGACCCCAAAGATCTCATGTTAAGTGGAGAAAGGGTTTTGCAAACT c.2280
S N N A E D P K D L M L S G E R V L Q T p.760
. . . . . . g.37293
GAAAGATCTGTAGAGAGTAGCAGTATTTCATTGGTACCTGGTACTGATTATGGCACTCAG c.2340
E R S V E S S S I S L V P G T D Y G T Q p.780
. . . . . . g.37353
GAAAGTATCTCGTTACTGGAAGTTAGCACTCTAGGGAAGGCAAAAACAGAACCAAATAAA c.2400
E S I S L L E V S T L G K A K T E P N K p.800
. . . . . . g.37413
TGTGTGAGTCAGTGTGCAGCATTTGAAAACCCCAAGGGACTAATTCATGGTTGTTCCAAA c.2460
C V S Q C A A F E N P K G L I H G C S K p.820
. . . . . . g.37473
GATAATAGAAATGACACAGAAGGCTTTAAGTATCCATTGGGACATGAAGTTAACCACAGT c.2520
D N R N D T E G F K Y P L G H E V N H S p.840
. . . . . . g.37533
CGGGAAACAAGCATAGAAATGGAAGAAAGTGAACTTGATGCTCAGTATTTGCAGAATACA c.2580
R E T S I E M E E S E L D A Q Y L Q N T p.860
. . . . . . g.37593
TTCAAGGTTTCAAAGCGCCAGTCATTTGCTCCGTTTTCAAATCCAGGAAATGCAGAAGAG c.2640
F K V S K R Q S F A P F S N P G N A E E p.880
. . . . . . g.37653
GAATGTGCAACATTCTCTGCCCACTCTGGGTCCTTAAAGAAACAAAGTCCAAAAGTCACT c.2700
E C A T F S A H S G S L K K Q S P K V T p.900
. . . . . . g.37713
TTTGAATGTGAACAAAAGGAAGAAAATCAAGGAAAGAATGAGTCTAATATCAAGCCTGTA c.2760
F E C E Q K E E N Q G K N E S N I K P V p.920
. . . . . . g.37773
CAGACAGTTAATATCACTGCAGGCTTTCCTGTGGTTGGTCAGAAAGATAAGCCAGTTGAT c.2820
Q T V N I T A G F P V V G Q K D K P V D p.940
. . . . . . g.37833
AATGCCAAATGTAGTATCAAAGGAGGCTCTAGGTTTTGTCTATCATCTCAGTTCAGAGGC c.2880
N A K C S I K G G S R F C L S S Q F R G p.960
. . . . . . g.37893
AACGAAACTGGACTCATTACTCCAAATAAACATGGACTTTTACAAAACCCATATCGTATA c.2940
N E T G L I T P N K H G L L Q N P Y R I p.980
. . . . . . g.37953
CCACCACTTTTTCCCATCAAGTCATTTGTTAAAACTAAATGTAAGAAAAATCTGCTAGAG c.3000
P P L F P I K S F V K T K C K K N L L E p.1000
. . . . . . g.38013
GAAAACTTTGAGGAACATTCAATGTCACCTGAAAGAGAAATGGGAAATGAGAACATTCCA c.3060
E N F E E H S M S P E R E M G N E N I P p.1020
. . . . . . g.38073
AGTACAGTGAGCACAATTAGCCGTAATAACATTAGAGAAAATGTTTTTAAAGAAGCCAGC c.3120
S T V S T I S R N N I R E N V F K E A S p.1040
. . . . . . g.38133
TCAAGCAATATTAATGAAGTAGGTTCCAGTACTAATGAAGTGGGCTCCAGTATTAATGAA c.3180
S S N I N E V G S S T N E V G S S I N E p.1060
. . . . . . g.38193
ATAGGTTCCAGTGATGAAAACATTCAAGCAGAACTAGGTAGAAACAGAGGGCCAAAATTG c.3240
I G S S D E N I Q A E L G R N R G P K L p.1080
. . . . . . g.38253
AATGCTATGCTTAGATTAGGGGTTTTGCAACCTGAGGTCTATAAACAAAGTCTTCCTGGA c.3300
N A M L R L G V L Q P E V Y K Q S L P G p.1100
. . . . . . g.38313
AGTAATTGTAAGCATCCTGAAATAAAAAAGCAAGAATATGAAGAAGTAGTTCAGACTGTT c.3360
S N C K H P E I K K Q E Y E E V V Q T V p.1120
. . . . . . g.38373
AATACAGATTTCTCTCCATATCTGATTTCAGATAACTTAGAACAGCCTATGGGAAGTAGT c.3420
N T D F S P Y L I S D N L E Q P M G S S p.1140
. . . . . . g.38433
CATGCATCTCAGGTTTGTTCTGAGACACCTGATGACCTGTTAGATGATGGTGAAATAAAG c.3480
H A S Q V C S E T P D D L L D D G E I K p.1160
. . . . . . g.38493
GAAGATACTAGTTTTGCTGAAAATGACATTAAGGAAAGTTCTGCTGTTTTTAGCAAAAGC c.3540
E D T S F A E N D I K E S S A V F S K S p.1180
. . . . . . g.38553
GTCCAGAAAGGAGAGCTTAGCAGGAGTCCTAGCCCTTTCACCCATACACATTTGGCTCAG c.3600
V Q K G E L S R S P S P F T H T H L A Q p.1200
. . . . . . g.38613
GGTTACCGAAGAGGGGCCAAGAAATTAGAGTCCTCAGAAGAGAACTTATCTAGTGAGGAT c.3660
G Y R R G A K K L E S S E E N L S S E D p.1220
. . . . . . g.38673
GAAGAGCTTCCCTGCTTCCAACACTTGTTATTTGGTAAAGTAAACAATATACCTTCTCAG c.3720
E E L P C F Q H L L F G K V N N I P S Q p.1240
. . . . . . g.38733
TCTACTAGGCATAGCACCGTTGCTACCGAGTGTCTGTCTAAGAACACAGAGGAGAATTTA c.3780
S T R H S T V A T E C L S K N T E E N L p.1260
. . . . . . g.38793
TTATCATTGAAGAATAGCTTAAATGACTGCAGTAACCAGGTAATATTGGCAAAGGCATCT c.3840
L S L K N S L N D C S N Q V I L A K A S p.1280
. . . . . . g.38853
CAGGAACATCACCTTAGTGAGGAAACAAAATGTTCTGCTAGCTTGTTTTCTTCACAGTGC c.3900
Q E H H L S E E T K C S A S L F S S Q C p.1300
. . . . . . g.38913
AGTGAATTGGAAGACTTGACTGCAAATACAAACACCCAGGATCCTTTCTTGATTGGTTCT c.3960
S E L E D L T A N T N T Q D P F L I G S p.1320
. . . . . . g.38973
TCCAAACAAATGAGGCATCAGTCTGAAAGCCAGGGAGTTGGTCTGAGTGACAAGGAATTG c.4020
S K Q M R H Q S E S Q G V G L S D K E L p.1340
. . . . . . g.39033
GTTTCAGATGATGAAGAAAGAGGAACGGGCTTGGAAGAAAATAATCAAGAAGAGCAAAGC c.4080
V S D D E E R G T G L E E N N Q E E Q S p.1360
. | 12 . . . . . g.39495
ATGGATTCAAACTTAG | GTGAAGCAGCATCTGGGTGTGAGAGTGAAACAAGCGTCTCTGAA c.4140
M D S N L G | E A A S G C E S E T S V S E p.1380
. . . . | 13 . . g.47923
GACTGCTCAGGGCTATCCTCTCAGAGTGACATTTTAACCACTCAG | CAGAGGGATACCATG c.4200
D C S G L S S Q S D I L T T Q | Q R D T M p.1400
. . . . . . g.47983
CAACATAACCTGATAAAGCTCCAGCAGGAAATGGCTGAACTAGAAGCTGTGTTAGAACAG c.4260
Q H N L I K L Q Q E M A E L E A V L E Q p.1420
. . . . . . g.48043
CATGGGAGCCAGCCTTCTAACAGCTACCCTTCCATCATAAGTGACTCTTCTGCCCTTGAG c.4320
H G S Q P S N S Y P S I I S D S S A L E p.1440
. . . | 14. . . g.53892
GACCTGCGAAATCCAGAACAAAGCACATCAGAAAAAG | CAGTATTAACTTCACAGAAAAGT c.4380
D L R N P E Q S T S E K A | V L T S Q K S p.1460
. . . . . . g.53952
AGTGAATACCCTATAAGCCAGAATCCAGAAGGCCTTTCTGCTGACAAGTTTGAGGTGTCT c.4440
S E Y P I S Q N P E G L S A D K F E V S p.1480
. . . . | 15 . . g.55978
GCAGATAGTTCTACCAGTAAAAATAAAGAACCAGGAGTGGAAAG | GTCATCCCCTTCTAAA c.4500
A D S S T S K N K E P G V E R | S S P S K p.1500
. . . . . . g.56038
TGCCCATCATTAGATGATAGGTGGTACATGCACAGTTGCTCTGGGAGTCTTCAGAATAGA c.4560
C P S L D D R W Y M H S C S G S L Q N R p.1520
. . . . . . g.56098
AACTACCCATCTCAAGAGGAGCTCATTAAGGTTGTTGATGTGGAGGAGCAACAGCTGGAA c.4620
N Y P S Q E E L I K V V D V E E Q Q L E p.1540
. . . . . | 16 . g.59250
GAGTCTGGGCCACACGATTTGACGGAAACATCTTACTTGCCAAGGCAAGATCTAG | AGGGA c.4680
E S G P H D L T E T S Y L P R Q D L E | G p.1560
. . . . . . g.59310
ACCCCTTACCTGGAATCTGGAATCAGCCTCTTCTCTGATGACCCTGAATCTGATCCTTCT c.4740
T P Y L E S G I S L F S D D P E S D P S p.1580
. . . . . . g.59370
GAAGACAGAGCCCCAGAGTCAGCTCGTGTTGGCAACATACCATCTTCAACCTCTGCATTG c.4800
E D R A P E S A R V G N I P S S T S A L p.1600
. . . . . . g.59430
AAAGTTCCCCAATTGAAAGTTGCAGAATCTGCCCAGAGTCCAGCTGCTGCTCATACTACT c.4860
K V P Q L K V A E S A Q S P A A A H T T p.1620
. . . . . . g.59490
GATACTGCTGGGTATAATGCAATGGAAGAAAGTGTGAGCAGGGAGAAGCCAGAATTGACA c.4920
D T A G Y N A M E E S V S R E K P E L T p.1640
. . . . . . g.59550
GCTTCAACAGAAAGGGTCAACAAAAGAATGTCCATGGTGGTGTCTGGCCTGACCCCAGAA c.4980
A S T E R V N K R M S M V V S G L T P E p.1660
| 17 . . . . . . g.62842
GAATTT | ATGCTCGTGTACAAGTTTGCCAGAAAACACCACATCACTTTAACTAATCTAATT c.5040
E F | M L V Y K F A R K H H I T L T N L I p.1680
. . . | 18 . . . g.66558
ACTGAAGAGACTACTCATGTTGTTATGAAAACAG | ATGCTGAGTTTGTGTGTGAACGGACA c.5100
T E E T T H V V M K T D | A E F V C E R T p.1700
. . . . . | 19 . g.67118
CTGAAATATTTTCTAGGAATTGCGGGAGGAAAATGGGTAGTTAGCTATTTCT | GGGTGACC c.5160
L K Y F L G I A G G K W V V S Y F W | V T p.1720
. . . | 20 . . . g.73375
CAGTCTATTAAAGAAAGAAAAATGCTGAATGAG | CATGATTTTGAAGTCAGAGGAGATGTG c.5220
Q S I K E R K M L N E | H D F E V R G D V p.1740
. . . . . | 21. g.79369
GTCAATGGAAGAAACCACCAAGGTCCAAAGCGAGCAAGAGAATCCCAGGACAGAAAG | ATC c.5280
V N G R N H Q G P K R A R E S Q D R K | I p.1760
. . . . . | 22 . g.81297
TTCAGGGGGCTAGAAATCTGTTGCTATGGGCCCTTCACCAACATGCCCACAG | ATCAACTG c.5340
F R G L E I C C Y G P F T N M P T D | Q L p.1780
. . . . . . g.81357
GAATGGATGGTACAGCTGTGTGGTGCTTCTGTGGTGAAGGAGCTTTCATCATTCACCCTT c.5400
E W M V Q L C G A S V V K E L S S F T L p.1800
| 23 . . . . . . g.82834
GGCACA | GGTGTCCACCCAATTGTGGTTGTGCAGCCAGATGCCTGGACAGAGGACAATGGC c.5460
G T | G V H P I V V V Q P D A W T E D N G p.1820
| 24. . . . . . g.84734
TTCCATG | CAATTGGGCAGATGTGTGAGGCACCTGTGGTGACCCGAGAGTGGGTGTTGGAC c.5520
F H A | I G Q M C E A P V V T R E W V L D p.1840
. . . . . . g.84794
AGTGTAGCACTCTACCAGTGCCAGGAGCTGGACACCTACCTGATACCCCAGATCCCCCAC c.5580
S V A L Y Q C Q E L D T Y L I P Q I P H p.1860
. g.84806
AGCCACTACTGA c.5592
S H Y X p.1863
. . . . . . g.84866
ctgcagccagccacaggtacagagccacaggaccccaagaatgagcttacaaagtggcct c.*60
. . . . . . g.84926
ttccaggccctgggagctcctctcactcttcagtccttctactgtcctggctactaaata c.*120
. . . . . . g.84986
ttttatgtacatcagcctgaaaaggacttctggctatgcaagggtcccttaaagattttc c.*180
. . . . . . g.85046
tgcttgaagtctcccttggaaatctgccatgagcacaaaattatggtaatttttcacctg c.*240
. . . . . . g.85106
agaagattttaaaaccatttaaacgccaccaattgagcaagatgctgattcattatttat c.*300
. . . . . . g.85166
cagccctattctttctattcaggctgttgttggcttagggctggaagcacagagtggctt c.*360
. . . . . . g.85226
ggcctcaagagaatagctggtttccctaagtttacttctctaaaaccctgtgttcacaaa c.*420
. . . . . . g.85286
ggcagagagtcagacccttcaatggaaggagagtgcttgggatcgattatgtgacttaaa c.*480
. . . . . . g.85346
gtcagaatagtccttgggcagttctcaaatgttggagtggaacattggggaggaaattct c.*540
. . . . . . g.85406
gaggcaggtattagaaatgaaaaggaaacttgaaacctgggcatggtggctcacgcctgt c.*600
. . . . . . g.85466
aatcccagcactttgggaggccaaggtgggcagatcactggaggtcaggagttcgaaacc c.*660
. . . . . . g.85526
agcctggccaacatggtgaaaccccatctctactaaaaatacagaaattagccggtcatg c.*720
. . . . . . g.85586
gtggtggacacctgtaatcccagctactcaggtggctaaggcaggagaatcacttcagcc c.*780
. . . . . . g.85646
cgggaggtggaggttgcagtgagccaagatcataccacggcactccagcctgggtgacag c.*840
. . . . . . g.85706
tgagactgtggctcaaaaaaaaaaaaaaaaaaaggaaaatgaaactagaagagatttcta c.*900
. . . . . . g.85766
aaagtctgagatatatttgctagatttctaaagaatgtgttctaaaacagcagaagattt c.*960
. . . . . . g.85826
tcaagaaccggtttccaaagacagtcttctaattcctcattagtaataagtaaaatgttt c.*1020
. . . . . . g.85886
attgttgtagctctggtatataatccattcctcttaaaatataagacctctggcatgaat c.*1080
. . . . . . g.85946
atttcatatctataaaatgacagatcccaccaggaaggaagctgttgctttctttgaggt c.*1140
. . . . . . g.86006
gatttttttcctttgctccctgttgctgaaaccatacagcttcataaataattttgcttg c.*1200
. . . . . . g.86066
ctgaaggaagaaaaagtgtttttcataaacccattatccaggactgtttatagctgttgg c.*1260
. . . . . . g.86126
aaggactaggtcttccctagcccccccagtgtgcaagggcagtgaagacttgattgtaca c.*1320
. . . . . . g.86186
aaatacgttttgtaaatgttgtgctgttaacactgcaaataaacttggtagcaaacactt c.*1380
g.86189
cca c.*1383
(downstream sequence)
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