(used for variant description)
(last modified March 27, 2016)
This file was created to facilitate the description of sequence variants on transcript NM_001127221.1 in the CACNA1A gene based on a coding DNA reference sequence following the HGVS recommendations.
The sequence was taken from NG_011569.1, covering CACNA1A transcript NM_001127221.1.
(upstream sequence)
. . . . . g.5056
gatgtcccgagctgctatccccggctcggcccgggcagccgccttctgagcccccg c.-181
. . . . . . g.5116
acccgaggcgccgagccgccgccgcccgatgggctgggccgtggagcgtctccgcagtcg c.-121
. . . . . . g.5176
tagctccagccgccgcgctcccagccccggcagcctcagcatcagcggcggcggcggcgg c.-61
. . . . . . g.5236
cggcggcgtcttccgcatcgttcgccgcagcgtaacccggagccctttgctctttgcaga c.-1
. . . . . . g.5296
ATGGCCCGCTTCGGAGACGAGATGCCGGCCCGCTACGGGGGAGGAGGCTCCGGGGCAGCC c.60
M A R F G D E M P A R Y G G G G S G A A p.20
. . . . . . g.5356
GCCGGGGTGGTCGTGGGCAGCGGAGGCGGGCGAGGAGCCGGGGGCAGCCGGCAGGGCGGG c.120
A G V V V G S G G G R G A G G S R Q G G p.40
. . . . . . g.5416
CAGCCCGGGGCGCAAAGGATGTACAAGCAGTCAATGGCGCAGAGAGCGCGGACCATGGCA c.180
Q P G A Q R M Y K Q S M A Q R A R T M A p.60
. . . . . . g.5476
CTCTACAACCCCATCCCCGTCCGACAGAACTGCCTCACGGTTAACCGGTCTCTCTTCCTC c.240
L Y N P I P V R Q N C L T V N R S L F L p.80
. . . . . | 02 . g.56255
TTCAGCGAAGACAACGTGGTGAGAAAATACGCCAAAAAGATCACCGAATGGCC | TCCCTTT c.300
F S E D N V V R K Y A K K I T E W P | P F p.100
. . . . . . g.56315
GAATATATGATTTTAGCCACCATCATAGCGAATTGCATCGTCCTCGCACTGGAGCAGCAT c.360
E Y M I L A T I I A N C I V L A L E Q H p.120
. . . | 03 . . g.58466
CTGCCTGATGATGACAAGACCCCGATGTCTGAACGGCTG | GATGACACAGAACCATACTTC c.420
L P D D D K T P M S E R L | D D T E P Y F p.140
. . . . . . g.58526
ATTGGAATTTTTTGTTTCGAGGCTGGAATTAAAATCATTGCCCTTGGGTTTGCCTTCCAC c.480
I G I F C F E A G I K I I A L G F A F H p.160
. . . . . | 04 g.139682
AAAGGCTCCTACTTGAGGAATGGCTGGAATGTCATGGACTTTGTGGTGGTGCTAACGGG | C c.540
K G S Y L R N G W N V M D F V V V L T G | p.180
. . . . . . g.139742
ATCTTGGCGACAGTTGGGACGGAGTTTGACCTACGGACGCTGAGGGCAGTTCGAGTGCTG c.600
I L A T V G T E F D L R T L R A V R V L p.200
. . . | 05 . . . g.146020
CGGCCGCTCAAGCTGGTGTCTGGAATCCCAA | GTTTACAAGTCGTCCTGAAGTCGATCATG c.660
R P L K L V S G I P S | L Q V V L K S I M p.220
. . . . . . g.146080
AAGGCGATGATCCCTTTGCTGCAGATCGGCCTCCTCCTATTTTTTGCAATCCTTATTTTT c.720
K A M I P L L Q I G L L L F F A I L I F p.240
. . . . . . g.146140
GCAATCATAGGGTTAGAATTTTATATGGGAAAATTTCATACCACCTGCTTTGAAGAGGGG c.780
A I I G L E F Y M G K F H T T C F E E G p.260
| 06 . . . . . . g.151717
ACAG | ATGACATTCAGGGTGAGTCTCCGGCTCCATGTGGGACAGAAGAGCCCGCCCGCACC c.840
T D | D I Q G E S P A P C G T E E P A R T p.280
. . . . . . g.151777
TGCCCCAATGGGACCAAATGTCAGCCCTACTGGGAAGGGCCCAACAACGGGATCACTCAG c.900
C P N G T K C Q P Y W E G P N N G I T Q p.300
. . . . . . g.151837
TTCGACAACATCCTGTTTGCAGTGCTGACTGTTTTCCAGTGCATAACCATGGAAGGGTGG c.960
F D N I L F A V L T V F Q C I T M E G W p.320
. | 07 . . . . g.175593
ACTGATCTCCTCTACAAT | AGCAACGATGCCTCAGGGAACACTTGGAACTGGTTGTACTTC c.1020
T D L L Y N | S N D A S G N T W N W L Y F p.340
. . . . . . g.175653
ATCCCCCTCATCATCATCGGCTCCTTTTTTATGCTGAACCTTGTGCTGGGTGTGCTGTCA c.1080
I P L I I I G S F F M L N L V L G V L S p.360
| 08 . . . . . . g.177025
GG | GGAGTTTGCCAAAGAAAGGGAACGGGTGGAGAACCGGCGGGCTTTTCTGAAGCTGAGG c.1140
G | E F A K E R E R V E N R R A F L K L R p.380
. . . . . | 09 g.178537
CGGCAACAACAGATTGAACGTGAGCTCAATGGGTACATGGAGTGGATCTCAAAAGCAG | AA c.1200
R Q Q Q I E R E L N G Y M E W I S K A E | p.400
. . . . . | 10 . g.181129
GAGGTGATCCTCGCCGAGGATGAAACTGACGGGGAGCAGAGGCATCCCTTTGATG | GAGCT c.1260
E V I L A E D E T D G E Q R H P F D G | A p.420
. . . . . . g.181189
CTGCGGAGAACCACCATAAAGAAAAGCAAGACAGATTTGCTCAACCCCGAAGAGGCTGAG c.1320
L R R T T I K K S K T D L L N P E E A E p.440
. . | 11 . . . g.194171
GATCAGCTGGCTGATATAGCCTCTGTGG | GTTCTCCCTTCGCCCGAGCCAGCATTAAAAGT c.1380
D Q L A D I A S V G | S P F A R A S I K S p.460
. . . . . . g.194231
GCCAAGCTGGAGAACTCGACCTTTTTTCACAAAAAGGAGAGGAGGATGCGTTTCTACATC c.1440
A K L E N S T F F H K K E R R M R F Y I p.480
. . . . . . g.194291
CGCCGCATGGTCAAAACTCAGGCCTTCTACTGGACTGTACTCAGTTTGGTAGCTCTCAAC c.1500
R R M V K T Q A F Y W T V L S L V A L N p.500
. . . . . | 12 g.198681
ACGCTGTGTGTTGCTATTGTTCACTACAACCAGCCCGAGTGGCTCTCCGACTTCCTTT | AC c.1560
T L C V A I V H Y N Q P E W L S D F L Y | p.520
. . . . . . g.198741
TATGCAGAATTCATTTTCTTAGGACTCTTTATGTCCGAAATGTTTATAAAAATGTACGGG c.1620
Y A E F I F L G L F M S E M F I K M Y G p.540
. . . . . | 13 . g.202941
CTTGGGACGCGGCCTTACTTCCACTCTTCCTTCAACTGCTTTGACTGTGGG | GTTATCATT c.1680
L G T R P Y F H S S F N C F D C G | V I I p.560
. . . . . . g.203001
GGGAGCATCTTCGAGGTCATCTGGGCTGTCATAAAACCTGGCACATCCTTTGGAATCAGC c.1740
G S I F E V I W A V I K P G T S F G I S p.580
. . . . | 14 . . g.203225
GTGTTACGAGCCCTCAGGTTATTGCGTATTTTCAAAGTCACAAA | GTACTGGGCATCTCTC c.1800
V L R A L R L L R I F K V T K | Y W A S L p.600
. . . . . . g.203285
AGAAACCTGGTCGTCTCTCTCCTCAACTCCATGAAGTCCATCATCAGCCTGTTGTTTCTC c.1860
R N L V V S L L N S M K S I I S L L F L p.620
. . . . . | 15 . g.203610
CTTTTCCTGTTCATTGTCGTCTTCGCCCTTTTGGGAATGCAACTCTTCGGCGGCCA | GTTT c.1920
L F L F I V V F A L L G M Q L F G G Q | F p.640
. . . . . . g.203670
AATTTCGATGAAGGGACTCCTCCCACCAACTTCGATACTTTTCCAGCAGCAATAATGACG c.1980
N F D E G T P P T N F D T F P A A I M T p.660
| 16 . . . . . g.207627
GTGTTTCAG | ATCCTGACGGGCGAAGACTGGAACGAGGTCATGTACGACGGGATCAAGTCT c.2040
V F Q | I L T G E D W N E V M Y D G I K S p.680
. . . . . . g.207687
CAGGGGGGCGTGCAGGGCGGCATGGTGTTCTCCATCTATTTCATTGTACTGACGCTCTTT c.2100
Q G G V Q G G M V F S I Y F I V L T L F p.700
| 17. . . . . . g.207900
GGGAACT | ACACCCTCCTGAATGTGTTCTTGGCCATCGCTGTGGACAATCTGGCCAACGCC c.2160
G N Y | T L L N V F L A I A V D N L A N A p.720
. | 18 . . . . . g.210849
CAGGAGCTCACCAAG | GACGAGCAAGAGGAAGAAGAAGCAGCGAACCAGAAACTTGCCCTA c.2220
Q E L T K | D E Q E E E E A A N Q K L A L p.740
. . . . . . g.210909
CAGAAAGCCAAGGAGGTGGCAGAAGTGAGTCCTCTGTCCGCGGCCAACATGTCTATAGCT c.2280
Q K A K E V A E V S P L S A A N M S I A p.760
| 19 . . . . . . g.212165
GT | GAAAGAGCAACAGAAGAATCAAAAGCCAGCCAAGTCCGTGTGGGAGCAGCGGACCAGT c.2340
V | K E Q Q K N Q K P A K S V W E Q R T S p.780
. . . . . . g.212225
GAGATGCGAAAGCAGAACTTGCTGGCCAGCCGGGAGGCCCTGTATAACGAAATGGACCCG c.2400
E M R K Q N L L A S R E A L Y N E M D P p.800
. . . . . . g.212285
GACGAGCGCTGGAAGGCTGCCTACACGCGGCACCTGCGGCCAGACATGAAGACGCACTTG c.2460
D E R W K A A Y T R H L R P D M K T H L p.820
. . . . . . g.212345
GACCGGCCGCTGGTGGTGGACCCGCAGGAGAACCGCAACAACAACACCAACAAGAGCCGG c.2520
D R P L V V D P Q E N R N N N T N K S R p.840
. . . . . . g.212405
GCGGCCGAGCCCACCGTGGACCAGCGCCTCGGCCAGCAGCGCGCCGAGGACTTCCTCAGG c.2580
A A E P T V D Q R L G Q Q R A E D F L R p.860
. . . . . . g.212465
AAACAGGCCCGCTACCACGATCGGGCCCGGGACCCCAGCGGCTCGGCGGGCCTGGACGCA c.2640
K Q A R Y H D R A R D P S G S A G L D A p.880
. . . . . . g.212525
CGGAGGCCCTGGGCGGGAAGCCAGGAGGCCGAGCTGAGCCGGGAGGGACCCTACGGCCGC c.2700
R R P W A G S Q E A E L S R E G P Y G R p.900
. . . . . . g.212585
GAGTCGGACCACCACGCCCGGGAGGGCAGCCTGGAGCAACCCGGGTTCTGGGAGGGCGAG c.2760
E S D H H A R E G S L E Q P G F W E G E p.920
. . . . . . g.212645
GCCGAGCGAGGCAAGGCCGGGGACCCCCACCGGAGGCACGTGCACCGGCAGGGGGGCAGC c.2820
A E R G K A G D P H R R H V H R Q G G S p.940
. . . . . . g.212705
AGGGAGAGCCGCAGCGGGTCCCCGCGCACGGGCGCGGACGGGGAGCATCGACGTCATCGC c.2880
R E S R S G S P R T G A D G E H R R H R p.960
. . . . . . g.212765
GCGCACCGCAGGCCCGGGGAGGAGGGTCCGGAGGACAAGGCGGAGCGGAGGGCGCGGCAC c.2940
A H R R P G E E G P E D K A E R R A R H p.980
. . . . . . g.212825
CGCGAGGGCAGCCGGCCGGCCCGGGGCGGCGAGGGCGAGGGCGAGGGCCCCGACGGGGGC c.3000
R E G S R P A R G G E G E G E G P D G G p.1000
. . . . . . g.212885
GAGCGCAGGAGAAGGCACCGGCATGGCGCTCCAGCCACGTACGAGGGGGACGCGCGGAGG c.3060
E R R R R H R H G A P A T Y E G D A R R p.1020
. . . | 20 . . . g.224522
GAGGACAAGGAGCGGAGGCATCGGAGGAGGAA | AGAGAACCAGGGCTCCGGGGTCCCTGTG c.3120
E D K E R R H R R R K | E N Q G S G V P V p.1040
. . . . . . g.224582
TCGGGCCCCAACCTGTCAACCACCCGGCCAATCCAGCAGGACCTGGGCCGCCAAGACCCA c.3180
S G P N L S T T R P I Q Q D L G R Q D P p.1060
. . . . . . g.224642
CCCCTGGCAGAGGATATTGACAACATGAAGAACAACAAGCTGGCCACCGCGGAGTCGGCC c.3240
P L A E D I D N M K N N K L A T A E S A p.1080
. . . . . . g.224702
GCTCCCCACGGCAGCCTTGGCCACGCCGGCCTGCCCCAGAGCCCAGCCAAGATGGGAAAC c.3300
A P H G S L G H A G L P Q S P A K M G N p.1100
. . . . . . g.224762
AGCACCGACCCCGGCCCCATGCTGGCCATCCCTGCCATGGCCACCAACCCCCAGAACGCC c.3360
S T D P G P M L A I P A M A T N P Q N A p.1120
. . . . . . g.224822
GCCAGCCGCCGGACGCCCAACAACCCGGGGAACCCATCCAATCCCGGCCCCCCCAAGACC c.3420
A S R R T P N N P G N P S N P G P P K T p.1140
. . . . . . g.224882
CCCGAGAATAGCCTTATCGTCACCAACCCCAGCGGCACCCAGACCAATTCAGCTAAGACT c.3480
P E N S L I V T N P S G T Q T N S A K T p.1160
. . . . . . g.224942
GCCAGGAAACCCGACCACACCACAGTGGACATCCCCCCAGCCTGCCCACCCCCCCTCAAC c.3540
A R K P D H T T V D I P P A C P P P L N p.1180
. | 21 . . . . . g.226298
CACACCGTCGTACAAG | TGAACAAAAACGCCAACCCAGACCCACTGCCAAAAAAAGAGGAA c.3600
H T V V Q V | N K N A N P D P L P K K E E p.1200
. . . . . . g.226358
GAGAAGAAGGAGGAGGAGGAAGACGACCGTGGGGAAGACGGCCCTAAGCCAATGCCTCCC c.3660
E K K E E E E D D R G E D G P K P M P P p.1220
. . . | 22 . . . g.228089
TATAGCTCCATGTTCATCCTGTCCACGACCAACCC | CCTTCGCCGCCTGTGCCATTACATC c.3720
Y S S M F I L S T T N P | L R R L C H Y I p.1240
. . . . . . g.228149
CTGAACCTGCGCTACTTTGAGATGTGCATCCTCATGGTCATTGCCATGAGCAGCATCGCC c.3780
L N L R Y F E M C I L M V I A M S S I A p.1260
. . . . | 23 . . g.234347
CTGGCCGCCGAGGACCCTGTGCAGCCCAACGCACCTCGGAACAAC | GTGCTGCGATACTTT c.3840
L A A E D P V Q P N A P R N N | V L R Y F p.1280
. . . . | 24 . . g.235519
GACTACGTTTTTACAGGCGTCTTTACCTTTGAGATGGTGATCAAG | ATGATTGACCTGGGG c.3900
D Y V F T G V F T F E M V I K | M I D L G p.1300
. . . . . . g.235579
CTCGTCCTGCATCAGGGTGCCTACTTCCGTGACCTCTGGAATATTCTCGACTTCATAGTG c.3960
L V L H Q G A Y F R D L W N I L D F I V p.1320
. . . | 25 . . . g.248655
GTCAGTGGGGCCCTGGTAGCCTTTGCCTTCAC | TGGCAATAGCAAAGGAAAAGACATCAAC c.4020
V S G A L V A F A F T | G N S K G K D I N p.1340
. . . . . . g.248715
ACGATTAAATCCCTCCGAGTCCTCCGGGTGCTACGACCTCTTAAAACCATCAAGCGGCTG c.4080
T I K S L R V L R V L R P L K T I K R L p.1360
. | 26 . . . . . g.249898
CCAAAGCTCAAG | GCTGTGTTTGACTGTGTGGTGAACTCACTTAAAAACGTCTTCAACATC c.4140
P K L K | A V F D C V V N S L K N V F N I p.1380
. . . . . . g.249958
CTCATCGTCTACATGCTATTCATGTTCATCTTCGCCGTGGTGGCTGTGCAGCTCTTCAAG c.4200
L I V Y M L F M F I F A V V A V Q L F K p.1400
. . . . . | 27 . g.251766
GGGAAATTCTTCCACTGCACTGACGAGTCCAAAGAGTTTGAGAAAGATTGTCG | AGGCAAA c.4260
G K F F H C T D E S K E F E K D C R | G K p.1420
. . . . . . g.251826
TACCTCCTCTACGAGAAGAATGAGGTGAAGGCGCGAGACCGGGAGTGGAAGAAGTATGAA c.4320
Y L L Y E K N E V K A R D R E W K K Y E p.1440
. . . . . . g.251886
TTCCATTACGACAATGTGCTGTGGGCTCTGCTGACCCTCTTCACCGTGTCCACGGGAGAA c.4380
F H Y D N V L W A L L T L F T V S T G E p.1460
. | 28 . . . . . g.253958
GGCTGGCCACA | GGTCCTCAAGCATTCGGTGGACGCCACCTTTGAGAACCAGGGCCCCAGC c.4440
G W P Q | V L K H S V D A T F E N Q G P S p.1480
. . . . . . g.254018
CCCGGGTACCGCATGGAGATGTCCATTTTCTACGTCGTCTACTTTGTGGTGTTCCCCTTC c.4500
P G Y R M E M S I F Y V V Y F V V F P F p.1500
. . . . . . g.254078
TTCTTTGTCAATATCTTTGTGGCCTTGATCATCATCACCTTCCAGGAGCAAGGGGACAAG c.4560
F F V N I F V A L I I I T F Q E Q G D K p.1520
. . . | 29 . . . g.256228
ATGATGGAGGAATACAGCCTGGAGAAAAATGAG | AGGGCCTGCATTGATTTCGCCATCAGC c.4620
M M E E Y S L E K N E | R A C I D F A I S p.1540
. . . . . . g.256288
GCCAAGCCGCTGACCCGACACATGCCGCAGAACAAGCAGAGCTTCCAGTACCGCATGTGG c.4680
A K P L T R H M P Q N K Q S F Q Y R M W p.1560
. . . . . . g.256348
CAGTTCGTGGTGTCTCCGCCTTTCGAGTACACGATCATGGCCATGATCGCCCTCAACACC c.4740
Q F V V S P P F E Y T I M A M I A L N T p.1580
. | 30 . . . . g.258401
ATCGTGCTTATGATGAAG | TTCTATGGGGCTTCTGTTGCTTATGAAAATGCCCTGCGGGTG c.4800
I V L M M K | F Y G A S V A Y E N A L R V p.1600
. . . . . . g.258461
TTCAACATCGTCTTCACCTCCCTCTTCTCTCTGGAATGTGTGCTGAAAGTCATGGCTTTT c.4860
F N I V F T S L F S L E C V L K V M A F p.1620
| 31 . . . . . g.266246
GGGATTCTG | AATTATTTCCGCGATGCCTGGAACATCTTCGACTTTGTGACTGTTCTGGGC c.4920
G I L | N Y F R D A W N I F D F V T V L G p.1640
. . . | 32 . . . g.275757
AGCATCACCGATATCCTCGTGACTGAGTTTGGG | AATAACTTCATCAACCTGAGCTTTCTC c.4980
S I T D I L V T E F G | N N F I N L S F L p.1660
. . . . . . g.275817
CGCCTCTTCCGAGCTGCCCGGCTCATCAAACTTCTCCGTCAGGGTTACACCATCCGCATT c.5040
R L F R A A R L I K L L R Q G Y T I R I p.1680
. . . | 33 . . . g.276216
CTTCTCTGGACCTTTGTGCAGTCCTTCAAG | GCCCTGCCTTATGTCTGTCTGCTGATCGCC c.5100
L L W T F V Q S F K | A L P Y V C L L I A p.1700
. . . | 34 . . . g.276448
ATGCTCTTCTTCATCTATGCCATCATTGGGATGCAG | GTGTTTGGTAACATTGGCATCGAC c.5160
M L F F I Y A I I G M Q | V F G N I G I D p.1720
. . . . . . g.276508
GTGGAGGACGAGGACAGTGATGAAGATGAGTTCCAAATCACTGAGCACAATAACTTCCGG c.5220
V E D E D S D E D E F Q I T E H N N F R p.1740
. . . | 35 . . . g.279628
ACCTTCTTCCAGGCCCTCATGCTTCTCTTCCG | GAGTGCCACCGGGGAAGCTTGGCACAAC c.5280
T F F Q A L M L L F R | S A T G E A W H N p.1760
. . . . . . g.279688
ATCATGCTTTCCTGCCTCAGCGGGAAACCGTGTGATAAGAACTCTGGCATCCTGACTCGA c.5340
I M L S C L S G K P C D K N S G I L T R p.1780
. . . . . . g.279748
GAGTGTGGCAATGAATTTGCTTATTTTTACTTTGTTTCCTTCATCTTCCTCTGCTCGTTT c.5400
E C G N E F A Y F Y F V S F I F L C S F p.1800
| 36 . . . . . . g.281308
CTG | ATGCTGAATCTCTTTGTCGCCGTCATCATGGACAACTTTGAGTACCTCACCCGAGAC c.5460
L | M L N L F V A V I M D N F E Y L T R D p.1820
. . . . . . g.281368
TCCTCCATCCTGGGCCCCCACCACCTGGATGAGTACGTGCGTGTCTGGGCCGAGTATGAC c.5520
S S I L G P H H L D E Y V R V W A E Y D p.1840
. | 37 . . . . . g.282714
CCCGCAGCTTG | CGGTCGGATTCATTATAAGGATATGTACAGTTTATTACGAGTAATATCT c.5580
P A A C | G R I H Y K D M Y S L L R V I S p.1860
. . . . | 38 . g.286700
CCCCCTCTCGGCTTAGGCAAGAAATGTCCTCATAGGGTTGCTTGCAAG | CGGCTTCTGCGG c.5640
P P L G L G K K C P H R V A C K | R L L R p.1880
. . . . . . g.286760
ATGGACCTGCCCGTCGCAGATGACAACACCGTCCACTTCAATTCCACCCTCATGGCTCTG c.5700
M D L P V A D D N T V H F N S T L M A L p.1900
. . . | 39 . . . g.296878
ATCCGCACAGCCCTGGACATCAAGATTGCCAAGG | GAGGAGCCGACAAACAGCAGATGGAC c.5760
I R T A L D I K I A K G | G A D K Q Q M D p.1920
. . . . . . g.296938
GCTGAGCTGCGGAAGGAGATGATGGCGATTTGGCCCAATCTGTCCCAGAAGACGCTAGAC c.5820
A E L R K E M M A I W P N L S Q K T L D p.1940
. . | 40 . . . . g.297165
CTGCTGGTCACACCTCACAAGT | CCACGGACCTCACCGTGGGGAAGATCTACGCAGCCATG c.5880
L L V T P H K S | T D L T V G K I Y A A M p.1960
. . . . . . g.297225
ATGATCATGGAGTACTACCGGCAGAGCAAGGCCAAGAAGCTGCAGGCCATGCGCGAGGAG c.5940
M I M E Y Y R Q S K A K K L Q A M R E E p.1980
| 41 . . . . . . g.298777
CAG | GACCGGACACCCCTCATGTTCCAGCGCATGGAGCCCCCGTCCCCAACGCAGGAAGGG c.6000
Q | D R T P L M F Q R M E P P S P T Q E G p.2000
. . . . . | 42 . g.298945
GGACCTGGCCAGAACGCCCTCCCCTCCACCCAGCTGGACCCAGGAGGAGCCCT | GATGGCT c.6060
G P G Q N A L P S T Q L D P G G A L | M A p.2020
. . . . . . g.299005
CACGAAAGCGGCCTCAAGGAGAGCCCGTCCTGGGTGACCCAGCGTGCCCAGGAGATGTTC c.6120
H E S G L K E S P S W V T Q R A Q E M F p.2040
. . . . . . g.299065
CAGAAGACGGGCACATGGAGTCCGGAACAAGGCCCCCCTACCGACATGCCCAACAGCCAG c.6180
Q K T G T W S P E Q G P P T D M P N S Q p.2060
. | 43 . . . . . g.299292
CCTAACTCTCAG | TCCGTGGAGATGCGAGAGATGGGCAGAGATGGCTACTCCGACAGCGAG c.6240
P N S Q | S V E M R E M G R D G Y S D S E p.2080
. . . . . . g.299352
CACTACCTCCCCATGGAAGGCCAGGGCCGGGCTGCCTCCATGCCCCGCCTCCCTGCAGAG c.6300
H Y L P M E G Q G R A A S M P R L P A E p.2100
| 44 . . . . | 45 . . g.301980
AACCAG | AGGAGAAGGGGCCGGCCACGTGGGAATAACCTCAGT | ACCATCTCAGACACCAGC c.6360
N Q | R R R G R P R G N N L S | T I S D T S p.2120
. . . . . . g.302040
CCCATGAAGCGTTCAGCCTCCGTGCTGGGCCCCAAGGCCCGACGCCTGGACGATTACTCG c.6420
P M K R S A S V L G P K A R R L D D Y S p.2140
. . . . . . g.302100
CTGGAGCGGGTCCCGCCCGAGGAGAACCAGCGGCACCACCAGCGGCGCCGCGACCGCAGC c.6480
L E R V P P E E N Q R H H Q R R R D R S p.2160
. . . . | 46 . g.302462
CACCGCGCCTCTGAGCGCTCCCTGGGCCGCTACACCGATGTGGACACAG | GCTTGGGGACA c.6540
H R A S E R S L G R Y T D V D T G | L G T p.2180
. . . . . . g.302522
GACCTGAGCATGACCACCCAATCCGGGGACCTGCCGTCGAAGGAGCGGGACCAGGAGCGG c.6600
D L S M T T Q S G D L P S K E R D Q E R p.2200
. . . . . . g.302582
GGCCGGCCCAAGGATCGGAAGCATCGACAGCACCACCACCACCACCACCACCACCACCAT c.6660
G R P K D R K H R Q H H H H H H H H H H p.2220
. . . . . . g.302642
CCCCCGCCCCCCGACAAGGACCGCTATGCCCAGGAACGGCCGGACCACGGCCGGGCACGG c.6720
P P P P D K D R Y A Q E R P D H G R A R p.2240
. . . . . . g.302702
GCTCGGGACCAGCGCTGGTCCCGCTCGCCCAGCGAGGGCCGAGAGCACATGGCGCACCGG c.6780
A R D Q R W S R S P S E G R E H M A H R p.2260
| 47 g.303469
CAG | TAG c.6786
Q | X p.2261
. . . . . . g.303529
ttccgtaagtggaagcccagccccctcaacatctggtaccagcactccgcggcggggccg c.*60
. . . . . . g.303589
ccgccagctcccccagaccccctccaccccccggccacacgtgtcctattcccctgtgat c.*120
. . . . . . g.303649
ccgtaaggccggcggctcggggcccccgcagcagcagcagcagcagcagcagcagcagca c.*180
. . . . . . g.303709
gcagcaggcggtggccaggccgggccgggcggccaccagcggccctcggaggtacccagg c.*240
. . . . . . g.303769
ccccacggccgagcctctggccggagatcggccgcccacggggggccacagcagcggccg c.*300
. . . . . . g.303829
ctcgcccaggatggagaggcgggtcccaggcccggcccggagcgagtcccccagggcctg c.*360
. . . . . . g.303889
tcgacacggcggggcccggtggccggcatctggcccgcacgtgtccgaggggcccccggg c.*420
. . . . . . g.303949
tccccggcaccatggctactaccggggctccgactacgacgaggccgatggcccgggcag c.*480
. . . . . . g.304009
cgggggcggcgaggaggccatggccggggcctacgacgcgccaccccccgtacgacacgc c.*540
. . . . . . g.304069
gtcctcgggcgccaccgggcgctcgcccaggactccccgggcctcgggcccggcctgcgc c.*600
. . . . . . g.304129
ctcgccttctcggcacggccggcgactccccaacggctactacccggcgcacggactggc c.*660
. . . . . . g.304189
caggccccgcgggccgggctccaggaagggcctgcacgaaccctacagcgagagtgacga c.*720
. . . . . . g.304249
tgattggtgctaagcccgggcgaggtggcgcccgcccggccccccacgcaccccacgcac c.*780
. . . . . . g.304309
acaccccacccgaggagccgcgcagaggccgcgggggcccagcacagagggcccgggaga c.*840
. . . . . . g.304369
gggccagccgggagaccccagactctggagaggccagggctgggccacaagggtgtcccg c.*900
. . . . . . g.304429
cagagaccctcggccaaaagagaccctcctgggcagccacggcgccccccaaccagcccc c.*960
. . . . . . g.304489
gatccccccacccacgacaggggctctcgggtgggaggcagggagcagacaaaccacaca c.*1020
. . . . . . g.304549
gccaagggatttgaattaactcagccatttttggagaactttggggaacatgaaaaaaaa c.*1080
. . . . . . g.304609
aaaaaaaaaaaaaaaaaaaaacatttttaaaagaaaaaacggggagaaaaaaatagcttc c.*1140
. . . . . . g.304669
tattgatgagttttatcatctcaattgaatctttcctttccctgatgaagacagctggtg c.*1200
. . . . . . g.304729
gccgagtgcggcaaagaagccagaaggaaccagaatcccagtgccctacacccaccacca c.*1260
. . . . . . g.304789
gacacactcacacccacacacgttctcagacacacacaagagtgcttgccggttatacca c.*1320
. . . . . . g.304849
aaccctactattactgcctgcagaaatcaatttaaaaaaataataataacaataaacaat c.*1380
. . . . . . g.304909
tttaaaaaggacaaaaaaattaatgattgagaaaagaggcatttttttctgacatttggt c.*1440
. . . . . . g.304969
cctgcttgaaacaacaaaagaagaagaaaaacccaccatcaccaccgattcctttgcttc c.*1500
. . . . . . g.305029
ttttttccttttttcctaccttgtttgaaaaccgtgggcttgggactgtgaattattgca c.*1560
. . . . g.305073
tgacattcaaaaagaaaaaaaaaataaaaaaaagttgaatcaaa c.*1604
(downstream sequence)
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