(used for variant description)
(last modified March 28, 2016)
This file was created to facilitate the description of sequence variants on transcript NM_022124.5 in the CDH23 gene based on a coding DNA reference sequence following the HGVS recommendations.
The sequence was taken from NG_008835.1, covering CDH23 transcript NM_022124.5.
(upstream sequence)
. . . g.5017
gcggcggcggcggctcgggagagagggacg c.-361
. . . . . . g.5077
cgggctgcaggcgcgatgcttggctagaggacgcgtccgacggcggccggacgctgaggt c.-301
. . . . . . g.5137
ggtcggggctagtcagcccggcctgggcatggagcgcggggtggcagagcctctggacgt c.-241
. . . . . . g.5197
ttggggcgcgcccagtccgagcccccggcgcgcctgaagttgcgagcggcgagcggcgag c.-181
. . . . . . g.5257
cggcgagcggcccgcggagacccaggagctgccggcacgccgcggatgagccttcgcgcc c.-121
. . . . . . g.5317
ggcgggaagacgcggcggtggccagggccagagcaggcggcccgcgggggccgatccggc c.-61
. . . . . . | 02 g.47885
ggagagcagagcccgaggcgaggcgaggcgcggcgccgctgcacacacgcacacg | gagcc c.-1
. . . . . . g.47945
ATGGGGCGCCATGTTGCCACCAGCTGCCACGTGGCCTGGCTTTTGGTGCTGATCTCTGGA c.60
M G R H V A T S C H V A W L L V L I S G p.20
| 03. . . . . . g.54424
TGCTGGG | GCCAGGTGAACCGGCTGCCCTTCTTCACCAACCACTTCTTTGATACATACCTG c.120
C W G | Q V N R L P F F T N H F F D T Y L p.40
. . | 04 . . . . g.118170
CTGATCAGCGAGGACACGCCTGTGG | GTTCTTCTGTGACCCAGTTGCTGGCCCAAGACATG c.180
L I S E D T P V G | S S V T Q L L A Q D M p.60
. . . . . . g.118230
GACAATGACCCCCTGGTGTTTGGCGTGTCTGGGGAGGAGGCCTCTCGCTTCTTTGCAGTG c.240
D N D P L V F G V S G E E A S R F F A V p.80
. . . . | 05 . g.119019
GAGCCTGACACTGGCGTGGTGTGGCTCCGGCAGCCACTGGACAGAGAG | ACCAAGTCAGAG c.300
E P D T G V V W L R Q P L D R E | T K S E p.100
. . . | 06 . . . g.119197
TTCACCGTGGAGTTCTCTGTCAGCGACCACCAGGGG | GTGATCACACGGAAGGTGAACATC c.360
F T V E F S V S D H Q G | V I T R K V N I p.120
. . . . . . g.119257
CAGGTTGGGGATGTGAATGACAACGCGCCCACATTTCACAATCAGCCCTACAGCGTCCGC c.420
Q V G D V N D N A P T F H N Q P Y S V R p.140
| 07 . . . . . g.174846
ATCCCTGAG | AATACACCAGTGGGGACGCCCATCTTCATCGTGAATGCCACAGACCCCGAC c.480
I P E | N T P V G T P I F I V N A T D P D p.160
. . . . . . g.174906
TTGGGGGCAGGGGGCAGCGTCCTCTACTCCTTCCAGCCCCCCTCCCAATTCTTCGCCATT c.540
L G A G G S V L Y S F Q P P S Q F F A I p.180
. . . . . . g.174966
GACAGCGCCCGCGGTATCGTCACAGTGATCCGGGAGCTGGACTACGAGACCACACAGGCC c.600
D S A R G I V T V I R E L D Y E T T Q A p.200
. . | 08 . . . . g.178879
TACCAGCTCACGGTCAACGCCACA | GATCAAGACAAGACCAGGCCTCTGTCCACCCTGGCC c.660
Y Q L T V N A T | D Q D K T R P L S T L A p.220
. . . . . . g.178939
AACTTGGCCATCATCATCACAGATGTCCAGGACATGGACCCCATCTTCATCAACCTGCCT c.720
N L A I I I T D V Q D M D P I F I N L P p.240
. . . | 09 . . . g.185994
TACAGCACCAACATCTACGAGCATTCTCCTCCG | GGCACGACGGTGCGCATCATCACCGCC c.780
Y S T N I Y E H S P P | G T T V R I I T A p.260
. . . . . | 10 . g.223565
ATAGACCAGGATAAAGGACGTCCCCGGGGCATTGGCTACACCATCGTTTCAG | GGAATACC c.840
I D Q D K G R P R G I G Y T I V S G | N T p.280
. . . . . . g.223625
AACAGCATCTTTGCCCTGGACTACATCAGCGGAGTGCTGACCTTGAATGGCCTGCTGGAC c.900
N S I F A L D Y I S G V L T L N G L L D p.300
. . . . | 11 . . g.225273
CGGGAGAACCCCCTGTACAGCCATGGCTTCATCCTGACTGTGAAG | GGCACGGAGCTGAAC c.960
R E N P L Y S H G F I L T V K | G T E L N p.320
. . . . . . g.225333
GATGACCGCACCCCATCTGACGCTACAGTCACCACGACCTTCAATATCCTGGTTATTGAC c.1020
D D R T P S D A T V T T T F N I L V I D p.340
. . . . . . g.225393
ATCAATGACAATGCCCCGGAGTTCAACAGCTCCGAGTACAGCGTGGCCATCACTGAGCTG c.1080
I N D N A P E F N S S E Y S V A I T E L p.360
. . . . . | 12 . g.251920
GCACAGGTCGGCTTTGCCCTTCCACTCTTCATCCAGGTGGTGGACAAGGATGAG | AATTTG c.1140
A Q V G F A L P L F I Q V V D K D E | N L p.380
| 13 . . . . . . g.253944
| GGCCTGAACAGCATGTTTGAGGTGTACTTGGTGGGGAACAACTCCCACCACTTCATCATC c.1200
| G L N S M F E V Y L V G N N S H H F I I p.400
. . . . . . g.254004
TCCCCGACCTCCGTCCAGGGGAAGGCGGACATTCGTATTCGGGTGGCCATCCCACTGGAC c.1260
S P T S V Q G K A D I R I R V A I P L D p.420
. . . | 14 . . . g.254542
TACGAGACCGTGGACCGCTACGACTTTGAT | CTCTTTGCCAATGAGAGTGTGCCTGACCAT c.1320
Y E T V D R Y D F D | L F A N E S V P D H p.440
. . . . . . g.254602
GTGGGCTATGCCAAGGTGAAGATCACTCTCATCAATGAAAATGACAACCGGCCCATCTTC c.1380
V G Y A K V K I T L I N E N D N R P I F p.460
. . . . . . g.254662
AGCCAGCCACTGTACAACATCAGCCTGTACGAGAACGTCACCGTGGGGACCTCTGTGCTG c.1440
S Q P L Y N I S L Y E N V T V G T S V L p.480
| 15 . . . . . g.283216
ACAGTCCTG | GCAACTGACAATGATGCAGGCACCTTTGGGGAAGTCAGCTACTTCTTCAGT c.1500
T V L | A T D N D A G T F G E V S Y F F S p.500
. | 16 . . . . . g.285555
GATGACCCTGACAG | GTTCTCGCTGGACAAGGACACGGGACTCATCATGCTGATTGCCAGG c.1560
D D P D R | F S L D K D T G L I M L I A R p.520
. . . . . . g.285615
CTGGACTATGAGCTCATCCAGCGCTTCACCCTGACGATCATTGCCCGGGACGGGGGCGGC c.1620
L D Y E L I Q R F T L T I I A R D G G G p.540
. . . . . . g.285675
GAGGAGACCACAGGCCGGGTCAGGATCAATGTGTTGGATGTCAACGACAACGTGCCCACC c.1680
E E T T G R V R I N V L D V N D N V P T p.560
. . . . . . g.285735
TTCCAGAAGGATGCCTACGTGGGTGCTCTGCGGGAGAACGAGCCTTCTGTCACACAGCTG c.1740
F Q K D A Y V G A L R E N E P S V T Q L p.580
. | 17 . . . . . g.287488
GTGCGGCTCCGG | GCAACAGATGAAGACTCCCCTCCCAACAACCAGATCACCTACAGCATT c.1800
V R L R | A T D E D S P P N N Q I T Y S I p.600
. . . . . | 18 g.290500
GTCAGTGCATCTGCCTTTGGCAGCTACTTCGACATCAGCCTGTACGAGGGCTATGGAG | TG c.1860
V S A S A F G S Y F D I S L Y E G Y G V | p.620
. . . . . . g.290560
ATCAGCGTCAGTCGCCCCCTGGATTATGAACAGATATCCAATGGGCTGATTTATCTGACG c.1920
I S V S R P L D Y E Q I S N G L I Y L T p.640
. . . . . . g.290620
GTCATGGCCATGGATGCTGGCAACCCCCCTCTCAACAGCACCGTCCCTGTCACCATCGAG c.1980
V M A M D A G N P P L N S T V P V T I E p.660
| 19 . . . . . . g.295754
GTGTTT | GATGAGAATGACAACCCTCCCACCTTCAGCAAGCCCGCCTACTTCGTCTCCGTG c.2040
V F | D E N D N P P T F S K P A Y F V S V p.680
. | 20 . . . . g.298562
GTGGAGAACATCATGGCAG | GAGCCACGGTGCTGTTCCTGAATGCCACAGACCTGGACCGC c.2100
V E N I M A G | A T V L F L N A T D L D R p.700
. . . . . . g.298622
TCCCGGGAGTACGGCCAGGAGTCCATCATCTACTCCTTGGAAGGCTCCACCCAGTTTCGG c.2160
S R E Y G Q E S I I Y S L E G S T Q F R p.720
. | 21 . . . . . g.302244
ATCAATGCCCGCTCAG | GGGAAATCACCACCACGTCTCTGCTTGACCGAGAGACCAAGTCT c.2220
I N A R S G | E I T T T S L L D R E T K S p.740
. . . . . . g.302304
GAATACATCCTCATCGTTCGCGCAGTGGACGGGGGTGTGGGCCACAACCAGAAAACTGGC c.2280
E Y I L I V R A V D G G V G H N Q K T G p.760
| 22 . . . . . g.303522
ATCGCCACC | GTAAACATCACCCTCCTGGACATCAATGACAACCACCCCACGTGGAAGGAC c.2340
I A T | V N I T L L D I N D N H P T W K D p.780
. . . . . | 23. g.310078
GCACCCTACTACATCAACCTGGTGGAGATGACCCCTCCAGACTCTGATGTGACCACG | GTG c.2400
A P Y Y I N L V E M T P P D S D V T T | V p.800
. . . . . . g.310138
GTGGCTGTTGACCCAGACCTGGGGGAGAATGGCACCCTGGTGTACAGCATCCAGCCACCC c.2460
V A V D P D L G E N G T L V Y S I Q P P p.820
. . . . . . g.310198
AACAAGTTCTACAGCCTCAACAGCACCACGGGCAAGATCCGCACCACCCACGCCATGCTG c.2520
N K F Y S L N S T T G K I R T T H A M L p.840
. . . . . . g.310258
GACCGGGAGAACCCCGACCCCCATGAGGCCGAGCTGATGCGCAAAATCGTCGTCTCTGTT c.2580
D R E N P D P H E A E L M R K I V V S V p.860
| 24. . . . . . g.310655
ACTGACT | GTGGCAGGCCCCCTCTGAAAGCCACCAGCAGTGCCACAGTGTTTGTGAACCTC c.2640
T D C | G R P P L K A T S S A T V F V N L p.880
. . . . . . g.310715
TTGGATCTCAATGACAATGACCCCACCTTTCAGAACCTGCCTTTTGTGGCCGAGGTGCTT c.2700
L D L N D N D P T F Q N L P F V A E V L p.900
. . . | 25 . . . g.312991
GAAGGCATCCCGGCGGGGGTCTCCATCTACCAA | GTGGTGGCCATCGACCTCGATGAGGGC c.2760
E G I P A G V S I Y Q | V V A I D L D E G p.920
. . . . . . g.313051
CTGAACGGCCTGGTGTCCTACCGCATGCCGGTGGGCATGCCCCGCATGGACTTCCTCATC c.2820
L N G L V S Y R M P V G M P R M D F L I p.940
. . . . . . g.313111
AACAGCAGCAGCGGCGTGGTGGTCACCACCACCGAGCTGGACCGCGAGCGCATCGCGGAG c.2880
N S S S G V V V T T T E L D R E R I A E p.960
. . . . . . g.313171
TACCAGCTGCGGGTGGTGGCCAGTGATGCAGGCACGCCCACCAAGAGCTCCACCAGCACG c.2940
Y Q L R V V A S D A G T P T K S S T S T p.980
. | 26 . . . . . g.314997
CTCACCATCCATG | TGCTGGATGTGAACGACGAGACGCCCACCTTCTTCCCGGCCGTGTAC c.3000
L T I H V | L D V N D E T P T F F P A V Y p.1000
. . . . . . g.315057
AATGTGTCTGTGTCCGAGGACGTGCCACGCGAGTTCCGGGTGGTCTGGCTGAACTGCACG c.3060
N V S V S E D V P R E F R V V W L N C T p.1020
. . . . | 27 . . g.317165
GACAACGACGTGGGCCTCAATGCAGAGCTCAGCTACTTCATCACAG | GTGGCAACGTGGAT c.3120
D N D V G L N A E L S Y F I T G | G N V D p.1040
. . . . . . g.317225
GGGAAGTTCAGCGTGGGTTACCGCGATGCCGTTGTGAGAACCGTGGTGGGCCTGGACCGG c.3180
G K F S V G Y R D A V V R T V V G L D R p.1060
. . . . | 28 . . g.320738
GAGACCACAGCCGCCTACATGCTCATCCTGGAGGCCATCG | ACAACGGCCCTGTAGGGAAG c.3240
E T T A A Y M L I L E A I D | N G P V G K p.1080
. . . . . . g.320798
CGACACACGGGCACAGCCACCGTGTTCGTCACTGTCCTGGATGTGAATGACAACCGGCCC c.3300
R H T G T A T V F V T V L D V N D N R P p.1100
. . . . . . g.320858
ATCTTTCTGCAGAGCAGCTATGAGGCCAGCGTCCCTGAGGACATCCCTGAAGGCCACAGC c.3360
I F L Q S S Y E A S V P E D I P E G H S p.1120
| 29 . . . . . g.332149
ATCTTGCAG | CTGAAAGCCACGGACGCAGATGAGGGCGAGTTTGGGCGTGTGTGGTACCGC c.3420
I L Q | L K A T D A D E G E F G R V W Y R p.1140
. | 30 . . . . . g.333475
ATCCTCCATG | GTAACCATGGCAACAACTTCCGGATCCATGTCAGCAATGGGCTCCTGATG c.3480
I L H G | N H G N N F R I H V S N G L L M p.1160
. . . . . . g.333535
CGAGGGCCCCGGCCCCTGGACCGGGAGCGGAACTCATCCCACGTGCTGATAGTGGAGGCC c.3540
R G P R P L D R E R N S S H V L I V E A p.1180
. . . | 31 . . g.338543
TACAACCACGACCTGGGCCCCATGCGGAGCTCCGTCAGG | GTGATTGTGTACGTGGAGGAC c.3600
Y N H D L G P M R S S V R | V I V Y V E D p.1200
. . . . . . g.338603
ATCAACGATGAGGCCCCCGTGTTCACACAGCAGCAGTACAGCCGTCTGGGGCTTCGAGAG c.3660
I N D E A P V F T Q Q Q Y S R L G L R E p.1220
. . . . . | 32 . g.340045
ACCGCAGGCATTGGAACGTCAGTCATCGTGGTCCAAGCCACAGACCGAGACTCTG | GGGAT c.3720
T A G I G T S V I V V Q A T D R D S G | D p.1240
. . . . . . g.340105
GGTGGCCTGGTGAACTACCGCATCCTGTCGGGCGCAGAGGGGAAGTTTGAGATTGACGAG c.3780
G G L V N Y R I L S G A E G K F E I D E p.1260
. . . . . . g.340165
AGCACAGGGCTTATCATCACCGTGAATTACCTGGACTACGAGACCAAGACCAGCTACATG c.3840
S T G L I I T V N Y L D Y E T K T S Y M p.1280
. . . . . . g.340225
ATGAATGTGTCGGCCACTGACCAGGCCCCGCCCTTCAACCAGGGCTTCTGCAGCGTCTAC c.3900
M N V S A T D Q A P P F N Q G F C S V Y p.1300
. . . . . . g.340285
ATCACTCTGCTCAACGAGCTGGACGAGGCCGTGCAGTTCTCCAATGCCTCATACGAGGCT c.3960
I T L L N E L D E A V Q F S N A S Y E A p.1320
. . . . . . g.340345
GCCATCCTGGAGAATCTGGCACTGGGTACTGAGATTGTGCGGGTCCAGGCCTACTCCATC c.4020
A I L E N L A L G T E I V R V Q A Y S I p.1340
. . . . . . g.340405
GACAACCTCAACCAAATCACGTACCGCTTCAACGCCTACACCAGCACCCAGGCCAAAGCC c.4080
D N L N Q I T Y R F N A Y T S T Q A K A p.1360
. . | 33 . . . . g.342329
CTCTTCAAGATAGACGCCATCACG | GGTGTGATCACAGTCCAGGGCCTGGTGGACCGTGAG c.4140
L F K I D A I T | G V I T V Q G L V D R E p.1380
. . . . . . g.342389
AAGGGCGACTTCTATACCTTGACAGTGGTGGCAGATGACGGCGGCCCCAAGGTGGACTCC c.4200
K G D F Y T L T V V A D D G G P K V D S p.1400
| 34 | 35 . . . . . g.346602
ACCGTG | AAG | GTCTACATCACTGTGCTGGACGAGAATGACAACAGCCCCCGGTTTGACTTC c.4260
T V | K | V Y I T V L D E N D N S P R F D F p.1420
. . . . . . g.346662
ACCTCCGACTCGGCGGTCAGCATACCCGAGGACTGCCCTGTGGGCCAGCGAGTGGCTACT c.4320
T S D S A V S I P E D C P V G Q R V A T p.1440
. . . | 36 . . g.347718
GTCAAGGCCTGGGACCCTGATGCTGGCAGCAATGGGCAG | GTGGTCTTCTCCCTGGCCTCT c.4380
V K A W D P D A G S N G Q | V V F S L A S p.1460
. . . . . . g.347778
GGCAACATCGCGGGGGCCTTTGAGATCGTCACCACCAATGACTCCATTGGCGAAGTGTTT c.4440
G N I A G A F E I V T T N D S I G E V F p.1480
. . . . | 37 . g.348887
GTGGCCAGGCCCCTGGACAGAGAAGAGCTGGATCACTACATCCTCCAG | GTTGTGGCTTCT c.4500
V A R P L D R E E L D H Y I L Q | V V A S p.1500
. . . . . . g.348947
GACCGAGGCACCCCTCCACGGAAGAAGGACCACATCCTGCAGGTGACCATCCTGGACATC c.4560
D R G T P P R K K D H I L Q V T I L D I p.1520
. . . . . | 38. g.349750
AATGACAACCCTCCAGTCATCGAGAGCCCCTTTGGATACAATGTCAGTGTGAATGAG | AAC c.4620
N D N P P V I E S P F G Y N V S V N E | N p.1540
. . . . . . g.349810
GTGGGTGGAGGTACTGCTGTGGTCCAGGTGAGAGCCACTGACCGTGACATCGGGATCAAC c.4680
V G G G T A V V Q V R A T D R D I G I N p.1560
. . . . . . g.349870
AGTGTTCTGTCCTACTACATCACCGAGGGCAACAAGGACATGGCCTTCCGCATGGACCGC c.4740
S V L S Y Y I T E G N K D M A F R M D R p.1580
. . . . . . g.349930
ATCAGCGGTGAGATCGCCACACGGCCTGCCCCGCCTGACCGCGAGCGCCAGAGCTTCTAC c.4800
I S G E I A T R P A P P D R E R Q S F Y p.1600
. . . . | 39 . . g.385748
CACCTGGTGGCCACTGTGGAGGACGAGGGCACCCCAACCCTGTCG | GCCACCACGCACGTG c.4860
H L V A T V E D E G T P T L S | A T T H V p.1620
. . . . . . g.385808
TACGTGACCATTGTGGATGAGAATGATAACGCGCCCATGTTCCAGCAGCCCCACTATGAG c.4920
Y V T I V D E N D N A P M F Q Q P H Y E p.1640
. . . . . . g.385868
GTGCTGCTGGATGAGGGCCCAGACACGCTCAACACCAGCCTCATCACCATCCAGGCACTG c.4980
V L L D E G P D T L N T S L I T I Q A L p.1660
. . . . . . g.385928
GACCTGGATGAGGGTCCCAACGGCACAGTCACCTATGCCATCGTCGCAGGCAACATCGTC c.5040
D L D E G P N G T V T Y A I V A G N I V p.1680
. . | 40. . . . g.386275
AACACCTTCCGCATCGACAGACACATG | GGTGTCATCACTGCTGCCAAAGAGCTGGACTAC c.5100
N T F R I D R H M | G V I T A A K E L D Y p.1700
. . . . . . g.386335
GAGATCAGCCACGGCCGCTACACCCTGATCGTCACTGCCACAGACCAGTGCCCCATCTTA c.5160
E I S H G R Y T L I V T A T D Q C P I L p.1720
. . | 41. . . . g.387353
TCCCACCGCCTCACCTCTACCACCACG | GTGCTTGTGAATGTGAATGACATCAACGACAAT c.5220
S H R L T S T T T | V L V N V N D I N D N p.1740
. . . . . . g.387413
GTGCCTACCTTCCCCCGGGACTATGAGGGACCATTTGAAGTCACTGAGGGCCAGCCGGGG c.5280
V P T F P R D Y E G P F E V T E G Q P G p.1760
. . . . . . g.387473
CCCAGAGTGTGGACCTTCCTGGCCCATGACCGAGACTCAGGACCCAACGGGCAGGTGGAG c.5340
P R V W T F L A H D R D S G P N G Q V E p.1780
. . | 42 . . . g.392372
TACAGCATCATGGATGGAGACCCTCTGG | GGGAGTTTGTGATCTCTCCTGTGGAGGGGGTG c.5400
Y S I M D G D P L G | E F V I S P V E G V p.1800
. . . . . . g.392432
CTAAGGGTCCGGAAGGACGTGGAGCTGGACCGGGAGACCATCGCCTTCTACAACCTGACC c.5460
L R V R K D V E L D R E T I A F Y N L T p.1820
. . . . | 43 . . g.392962
ATCTGTGCCCGTGACCGGGGGATGCCCCCACTCAGCTCCACA | ATGCTGGTGGGGATCCGG c.5520
I C A R D R G M P P L S S T | M L V G I R p.1840
. . . . . . g.393022
GTGCTGGACATCAACGACAACGACCCTGTGCTGCTGAACCTGCCCATGAACATCACCATC c.5580
V L D I N D N D P V L L N L P M N I T I p.1860
. . . . . . g.393082
AGCGAGAACAGCCCTGTCTCCAGCTTTGTCGCCCATGTCCTGGCCAGTGACGCTGACAGT c.5640
S E N S P V S S F V A H V L A S D A D S p.1880
. . . . . . g.393142
GGCTGCAATGCACGCCTCACCTTCAACATCACTGCGGGCAACCGCGAGCGGGCCTTCTTC c.5700
G C N A R L T F N I T A G N R E R A F F p.1900
. | 44 . . . . . g.393732
ATCAATGCCACG | ACAGGGATCGTCACTGTGAACCGGCCCCTGGACCGCGAGCGGATCCCA c.5760
I N A T | T G I V T V N R P L D R E R I P p.1920
. . . . . . g.393792
GAGTACAAGCTGACCATTTCTGTGAAGGACAACCCGGAGAATCCACGCATAGCCAGGAGG c.5820
E Y K L T I S V K D N P E N P R I A R R p.1940
| 45 . . . . . . g.397053
| GATTATGACTTGCTTCTGATCTTCCTTTCTGATGAGAATGACAACCACCCCCTCTTCACT c.5880
| D Y D L L L I F L S D E N D N H P L F T p.1960
. . . . | 46 . . g.398358
AAAAGCACCTACCAGGCAGAGGTGATGGAAAACTCTCCCGCTG | GCACCCCTCTCACGGTG c.5940
K S T Y Q A E V M E N S P A G | T P L T V p.1980
. . . . . . g.398418
CTCAATGGGCCCATCCTGGCCCTGGATGCAGACCAAGACATCTACGCCGTGGTGACCTAC c.6000
L N G P I L A L D A D Q D I Y A V V T Y p.2000
. . . . | 47 . g.399196
CAGCTGCTGGGTGCCCAGAGTGGCCTCTTTGACATCAACAGCAGCACCG | GTGTGGTGACC c.6060
Q L L G A Q S G L F D I N S S T G | V V T p.2020
. . . . . . g.399256
GTGAGGTCAGGTGTCATCATTGACCGGGAGGCATTCTCGCCACCCATCCTGGAGCTGCTG c.6120
V R S G V I I D R E A F S P P I L E L L p.2040
. . . . . . g.399316
CTGCTGGCTGAGGACATCGGGCTGCTCAACAGCACGGCCCACCTGCTCATCACCATCCTG c.6180
L L A E D I G L L N S T A H L L I T I L p.2060
. . . . . . g.399376
GATGACAATGACAACCGGCCCACCTTTAGCCCTGCCACCCTCACTGTCCATCTGCTAGAG c.6240
D D N D N R P T F S P A T L T V H L L E p.2080
. | 48 . . . . . g.401282
AACTGCCCGCCTG | GATTCTCAGTCCTTCAAGTCACAGCCACAGATGAGGACAGTGGCCTC c.6300
N C P P G | F S V L Q V T A T D E D S G L p.2100
. . . . . . g.401342
AATGGGGAGCTGGTCTACCGAATAGAAGCTGGGGCTCAGGACCGCTTCCTCATTCATCTG c.6360
N G E L V Y R I E A G A Q D R F L I H L p.2120
. . . . . . g.401402
GTCACCGGGGTCATCCGTGTTGGTAATGCCACCATCGACAGAGAGGAGCAGGAGTCCTAC c.6420
V T G V I R V G N A T I D R E E Q E S Y p.2140
. . . . . . g.401462
AGGCTAACGGTGGTGGCCACCGACCGGGGCACCGTTCCTCTCTCGGGCACAGCCATTGTC c.6480
R L T V V A T D R G T V P L S G T A I V p.2160
. . . . . . g.401522
ACCATTCTGATCGATGACATCAATGACTCCCGCCCCGAGTTCCTCAACCCCATCCAGACA c.6540
T I L I D D I N D S R P E F L N P I Q T p.2180
. . . . . . g.401582
GTGAGCGTGCTGGAGTCGGCTGAGCCAGGCACTGTCATTGCCAATATCACGGCCATTGAC c.6600
V S V L E S A E P G T V I A N I T A I D p.2200
. . . . . . g.401642
CACGACCTCAACCCAAAGCTAGAGTACCACATTGTCGGCATTGTGGCCAAGGACGACACT c.6660
H D L N P K L E Y H I V G I V A K D D T p.2220
. . . . . | 49 . g.405165
GATCGCCTGGTGCCCAACCAGGAGGACGCCTTTGCTGTGAATATCAACACAG | GATCTGTA c.6720
D R L V P N Q E D A F A V N I N T G | S V p.2240
. . . . . . g.405225
ATGGTGAAGTCCCCCATGAATCGGGAGCTGGTTGCCACCTATGAGGTCACTCTCTCAGTG c.6780
M V K S P M N R E L V A T Y E V T L S V p.2260
. . . . | 50 . g.406418
ATTGACAATGCCAGCGACCTACCAGAGCGCTCTGTCAGTGTGCCAAATG | CCAAGCTGACT c.6840
I D N A S D L P E R S V S V P N A | K L T p.2280
. . . . . . g.406478
GTCAACGTCCTGGACGTCAATGACAATACGCCCCAGTTCAAGCCCTTTGGGATCACCTAC c.6900
V N V L D V N D N T P Q F K P F G I T Y p.2300
. . . . . . g.406538
TACATGGAGCGGATCCTGGAGGGGGCCACCCCTGGGACCACACTCATTGCTGTGGCAGCC c.6960
Y M E R I L E G A T P G T T L I A V A A p.2320
. . . . . . g.406598
GTGGACCCTGACAAGGGCCTTAATGGGCTGGTCACCTACACCCTGCTGGACCTGGTGCCC c.7020
V D P D K G L N G L V T Y T L L D L V P p.2340
. . . | 51 . . . g.407190
CCAGGGTATGTCCAGCTGGAGGACTCCTCGGCAG | GGAAGGTCATTGCCAACCGGACAGTG c.7080
P G Y V Q L E D S S A G | K V I A N R T V p.2360
. . . . . . g.407250
GACTACGAGGAGGTGCACTGGCTCAACTTTACCGTGAGGGCCTCAGACAACGGGTCCCCG c.7140
D Y E E V H W L N F T V R A S D N G S P p.2380
. . . . . . g.407310
CCCCGGGCAGCTGAGATCCCTGTCTACCTGGAAATCGTGGACATCAATGACAACAACCCC c.7200
P R A A E I P V Y L E I V D I N D N N P p.2400
. . | 52 . . . . g.407581
ATCTTTGACCAGCCCTCCTACCAG | GAGGCTGTCTTTGAGGATGTGCCTGTGGGCACAATC c.7260
I F D Q P S Y Q | E A V F E D V P V G T I p.2420
. . . . . . g.407641
ATCCTGACAGTCACTGCCACTGATGCTGACTCAGGCAACTTTGCACTCATTGAGTACAGC c.7320
I L T V T A T D A D S G N F A L I E Y S p.2440
. . . . | 53 . . g.408707
CTTGGAGATGGAGAGAGCAAGTTTGCCATCAACCCCACCACG | GGTGACATCTATGTGCTG c.7380
L G D G E S K F A I N P T T | G D I Y V L p.2460
. . . . . . g.408767
TCTTCTCTGGACCGGGAGAAGAAGGACCACTATATCCTGACTGCCTTGGCCAAAGACAAC c.7440
S S L D R E K K D H Y I L T A L A K D N p.2480
. . . . | 54 . . g.410969
CCTGGGGATGTAGCCAGCAACCGTCGCGAAAATTCAGTGCAG | GTGGTGATCCAAGTGCTG c.7500
P G D V A S N R R E N S V Q | V V I Q V L p.2500
. . . . . . g.411029
GATGTCAATGACTGCCGGCCACAGTTCTCCAAGCCCCAGTTCAGCACAAGCGTGTATGAG c.7560
D V N D C R P Q F S K P Q F S T S V Y E p.2520
. . . . . . g.411089
AATGAGCCGGCGGGCACCTCGGTCATCACCATGATGGCCACTGACCAGGATGAAGGTCCC c.7620
N E P A G T S V I T M M A T D Q D E G P p.2540
. . . . | 55 . . g.411282
AATGGAGAGTTGACCTACTCACTTGAGGGCCCTGGCGTGG | AGGCCTTCCATGTGGACATG c.7680
N G E L T Y S L E G P G V E | A F H V D M p.2560
. . . . . . g.411342
GACTCGGGCTTGGTGACCACACAGCGGCCACTGCAGTCCTACGAGAAGTTCAGTCTGACC c.7740
D S G L V T T Q R P L Q S Y E K F S L T p.2580
. . . . . . g.411402
GTGGTGGCCACAGATGGTGGAGAGCCCCCACTCTGGGGCACCACCATGCTCCTGGTGGAG c.7800
V V A T D G G E P P L W G T T M L L V E p.2600
. . . . . . g.411462
GTCATCGACGTCAATGACAACCGCCCTGTCTTTGTGCGCCCACCCAACGGCACCATCCTC c.7860
V I D V N D N R P V F V R P P N G T I L p.2620
. | 56 . . . . . g.413907
CACATCAGAGAG | GAGATCCCGCTGCGCTCCAACGTGTACGAGGTCTACGCCACGGACAAG c.7920
H I R E | E I P L R S N V Y E V Y A T D K p.2640
. . . . . . g.413967
GATGAGGGCCTCAACGGGGCGGTGCGCTACAGCTTCCTGAAGACTGCGGGCAACCGGGAC c.7980
D E G L N G A V R Y S F L K T A G N R D p.2660
. . . . . . g.414027
TGGGAGTTCTTCATCATCGACCCAATCAGCGGCCTCATCCAGACTGCTCAGCGCCTGGAC c.8040
W E F F I I D P I S G L I Q T A Q R L D p.2680
. . | 57 . . . . g.414257
CGCGAGTCGCAGGCGGTGTACAGC | CTCATCTTGGTGGCCAGCGACCTGGGCCAGCCAGTG c.8100
R E S Q A V Y S | L I L V A S D L G Q P V p.2700
. . . . . . g.414317
CCATACGAGACTATGCAGCCGCTGCAGGTGGCCCTGGAGGACATCGATGACAACGAACCC c.8160
P Y E T M Q P L Q V A L E D I D D N E P p.2720
. | 58 . . . . g.415372
CTTTTCGTGAGGCCTCCA | AAAGGCAGCCCCCAGTACCAGCTGCTGACAGTGCCTGAGCAC c.8220
L F V R P P | K G S P Q Y Q L L T V P E H p.2740
. . . . . . g.415432
TCACCACGCGGCACCCTCGTGGGCAACGTGACAGGCGCAGTGGATGCAGATGAGGGCCCC c.8280
S P R G T L V G N V T G A V D A D E G P p.2760
. . | 59 . . . g.415601
AACGCGATCGTGTACTACTTCATCGCAG | CCGGCAACGAAGAGAAGAACTTCCATCTGCAG c.8340
N A I V Y Y F I A A | G N E E K N F H L Q p.2780
. . . . . . g.415661
CCCGATGGGTGTCTGCTGGTGCTGCGGGACCTGGACCGGGAGCGAGAAGCCATCTTCTCC c.8400
P D G C L L V L R D L D R E R E A I F S p.2800
. . . . . . g.415721
TTCATCGTCAAGGCCTCCAGCAATCGCAGCTGGACACCTCCCCGTGGACCCTCCCCAACC c.8460
F I V K A S S N R S W T P P R G P S P T p.2820
. . . . . . g.415781
CTCGACCTGGTTGCTGACCTCACACTGCAGGAGGTGCGCGTTGTGCTAGAGGACATCAAC c.8520
L D L V A D L T L Q E V R V V L E D I N p.2840
. . . . | 60 . . g.415919
GACCAGCCACCACGCTTCACCAAGGCTGAGTACACTGCAG | GGGTGGCCACCGACGCCAAG c.8580
D Q P P R F T K A E Y T A G | V A T D A K p.2860
. . . . . . g.415979
GTGGGCTCAGAGTTGATCCAGGTGCTGGCCCTGGATGCAGACATTGGCAACAACAGCCTT c.8640
V G S E L I Q V L A L D A D I G N N S L p.2880
. . . . . . g.416039
GTCTTCTACAGCATTCTGGCCATCCACTACTTCCGGGCCCTTGCCAACGACTCTGAAGAT c.8700
V F Y S I L A I H Y F R A L A N D S E D p.2900
. . | 61 . . . . g.417911
GTGGGCCAGGTCTTCACCATGG | GGAGCATGGACGGCATTCTGCGCACCTTCGACCTCTTC c.8760
V G Q V F T M G | S M D G I L R T F D L F p.2920
. . . . . . g.417971
ATGGCCTACAGCCCCGGCTACTTCGTGGTGGACATTGTGGCCCGAGACCTGGCAGGCCAC c.8820
M A Y S P G Y F V V D I V A R D L A G H p.2940
. . . . . . g.418031
AACGACACGGCCATCATCGGCATCTACATCCTGAGGGACGACCAGCGCGTCAAGATCGTC c.8880
N D T A I I G I Y I L R D D Q R V K I V p.2960
. . . . . . g.418091
ATTAACGAGATCCCCGACCGTGTGCGCGGCTTCGAGGAGGAGTTCATCCACCTGCTCTCC c.8940
I N E I P D R V R G F E E E F I H L L S p.2980
. . . | 62 . . g.418546
AACATCACTGGGGCCATTGTCAATACTGACAATGTGCAG | TTCCATGTGGACAAGAAGGGC c.9000
N I T G A I V N T D N V Q | F H V D K K G p.3000
. . . . . . g.418606
CGGGTGAACTTTGCGCAGACAGAACTGCTTATCCACGTGGTGAACCGCGATACCAACCGC c.9060
R V N F A Q T E L L I H V V N R D T N R p.3020
. | 63. . . . . g.419411
ATCCTGGACGTGGACCG | GGTGATCCAGATGATCGATGAGAACAAGGAGCAGCTACGGAAT c.9120
I L D V D R | V I Q M I D E N K E Q L R N p.3040
. . . . . . g.419471
CTTTTCCGGAACTACAACGTCCTGGACGTGCAGCCTGCCATCTCTGTCCGGCTGCCGGAT c.9180
L F R N Y N V L D V Q P A I S V R L P D p.3060
. | 64 . . . . g.419606
GACATGTCTGCCCTGCAG | ATGGCGATCATCGTCCTGGCTATCCTCCTGTTCCTGGCCGCC c.9240
D M S A L Q | M A I I V L A I L L F L A A p.3080
. . . | 65 . . g.419788
ATGCTCTTTGTCCTCATGAACTGGTACTACAGGACTGT | ACACAAGAGGAAGCTCAAGGCC c.9300
M L F V L M N W Y Y R T V | H K R K L K A p.3100
. | 66 . . . . g.420049
ATTGTGGCTGGCTCAGCTG | GGAATCGTGGCTTCATCGACATCATGGACATGCCTAACACC c.9360
I V A G S A G | N R G F I D I M D M P N T p.3120
. . | 67 . . . . g.420573
AACAAGTACTCCTTTGATGG | AGCCAACCCTGTGTGGCTGGATCCCTTCTGTCGGAACCTG c.9420
N K Y S F D G | A N P V W L D P F C R N L p.3140
. . . . . . g.420633
GAGCTGGCCGCCCAGGCGGAGCATGAGGATGACCTACCGGAGAACCTGAGTGAGATCGCC c.9480
E L A A Q A E H E D D L P E N L S E I A p.3160
. . . | 68 . . . g.420851
GACCTGTGGAACAGCCCCACGCGCACCCAT | GGAACTTTTGGGCGTGAGCCAGCAGCTGTC c.9540
D L W N S P T R T H | G T F G R E P A A V p.3180
. . . . . . g.420911
AAGCCTGATGATGACCGATACCTGCGGGCTGCCATCCAGGAGTATGACAACATTGCCAAG c.9600
K P D D D R Y L R A A I Q E Y D N I A K p.3200
. . . | 69 . . . g.421324
CTGGGCCAGATCATTCGTGAGGGGCCAATCAAG | GGCTCGCTGCTGAAGGTGGTCCTGGAG c.9660
L G Q I I R E G P I K | G S L L K V V L E p.3220
. . . . . . g.421384
GATTACCTGCGGCTCAAAAAGCTCTTTGCACAGCGGATGGTGCAAAAAGCCTCCTCCTGC c.9720
D Y L R L K K L F A Q R M V Q K A S S C p.3240
. | 70 . . . . g.423047
CACTCCTCCATCTCTGAG | CTGATACAGACTGAGCTGGACGAGGAGCCAGGAGACCACAGC c.9780
H S S I S E | L I Q T E L D E E P G D H S p.3260
. . . . . . g.423107
CCAGGGCAGGGTAGCCTGCGCTTCCGCCACAAGCCACCAGTGGAGCTCAAGGGGCCCGAT c.9840
P G Q G S L R F R H K P P V E L K G P D p.3280
. . . . . . g.423167
GGGATCCATGTGGTGCACGGCAGCACGGGCACGCTGCTGGCCACCGACCTCAACAGCCTG c.9900
G I H V V H G S T G T L L A T D L N S L p.3300
. . . . . . g.423227
CCCGAGGAAGACCAGAAGGGCCTGGGCCGCTCGCTGGAGACGCTGACCGCTGCCGAGGCC c.9960
P E E D Q K G L G R S L E T L T A A E A p.3320
. . . . . . g.423287
ACTGCCTTCGAGCGCAACGCCCGCACAGAATCCGCCAAATCCACACCCCTGCACAAACTT c.10020
T A F E R N A R T E S A K S T P L H K L p.3340
. . . . g.423332
CGCGACGTGATCATGGAGACCCCCCTGGAGATCACAGAGCTGTGA c.10065
R D V I M E T P L E I T E L X p.3354
. . . . . . g.423392
ctagacagggaagccttgtgggtgtgagcagcacccatccaccgtcccctcccagggagc c.*60
. . . . . . g.423452
aagggcagggacagggccggtcgggggggaccctccaaggccaggccttggggacaacct c.*120
. . . . . . g.423512
tggcttggccctggcagcccgcatcagctgctcagatcccacttttgccagacgctcatt c.*180
. . . . . . g.423572
cagcatctgacctctaccttcataagatctgttatttttataagaaaaccaaacaaaaat c.*240
. . . . . . g.423632
gttaagcatctaaggacaaggtaaggagggtcactggggcccaagagtctggggaccagc c.*300
. . . . . . g.423692
ttggctcaggctgagctgaaagaggccaaacaggccctcctccctcccagctccaccccg c.*360
. . . . . . g.423752
caagcaccatcccctccggctaagcaggcgcaagggaggcccagcgcggacatcccctgc c.*420
. . . . . . g.423812
tggccggacacccgactccagtccaagtctcgctacatttccgccacatccctctctgct c.*480
. . . . . . g.423872
ggacgtccaggtggaggtggcatccccacgtggacaagaaagtcaatgtcaatgaacaag c.*540
. . . . . . g.423932
cattctctccatttcactggcttcccaaatgtgtgcccagcttataaacagaagtgactg c.*600
. . . . . . g.423992
atgttccctccggttttgaatgtggagtgtttgtgtgtgttccttttttaaattaagtta c.*660
g.424001
ttccctcaa c.*669
(downstream sequence)
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