(used for variant description)
(last modified September 30, 2015)
This file was created to facilitate the description of sequence variants on transcript NM_017780.3 in the CHD7 gene based on a coding DNA reference sequence following the HGVS recommendations.
The sequence was taken from NC_000008.10, covering CHD7 transcript NM_017780.3.
(upstream sequence)
. g.5012
gcggcggcggcg c.-481
. . . . . . g.5072
gcggcggcggcggcagcggcggcggcggcggcggcgcgggggttgagtcgtggtggtgcg c.-421
. . . . . . g.5132
gacgcgctcgtgctcgggaactatcggattaaacttgaatcgagtgaaattacacaaagg c.-361
. . . . . . g.5192
agcgccgcggaggaggcggcccggggacccggacaccctgaaactcaccagagacccgtt c.-301
. . . . . . g.5252
cgcccccggccaactccgtgcccgtggattcagccccctggccgcagctgccgagccaac c.-241
. . . . . . g.5312
tccggagcccgctctgcgttttgttttcccctcggcactaggcagcggaggagcccgacc c.-181
. | 02 . . . . . g.67548
gacccg | gacctatatccagactttgcctgacactgcagggtccaagagaattaaagaaat c.-121
. . . . . . g.67608
atggaatgacatgaagaagattagttaaggattataggctttgagggcaaacacctcagt c.-61
. . . . . . g.67668
gaagtgaagcacaggcaagctcctgagctgtggtttggaggagccgtgtgttggaagaag c.-1
. . . . . . g.67728
ATGGCAGATCCAGGAATGATGAGTCTTTTTGGCGAGGATGGGAATATTTTCAGTGAAGGT c.60
M A D P G M M S L F G E D G N I F S E G p.20
. . . . . . g.67788
CTTGAAGGCCTCGGAGAATGTGGTTACCCGGAAAATCCAGTAAATCCTATGGGTCAGCAA c.120
L E G L G E C G Y P E N P V N P M G Q Q p.40
. . . . . . g.67848
ATGCCAATAGACCAAGGCTTTGCCTCTTTACAGCCATCCCTTCATCATCCTTCAACTAAT c.180
M P I D Q G F A S L Q P S L H H P S T N p.60
. . . . . . g.67908
CAAAATCAAACAAAGCTGACACATTTTGATCACTATAATCAGTATGAACAACAAAAGATG c.240
Q N Q T K L T H F D H Y N Q Y E Q Q K M p.80
. . . . . . g.67968
CATCTGATGGATCAGCCGAACAGAATGATGAGCAACACCCCTGGGAACGGACTCGCGTCT c.300
H L M D Q P N R M M S N T P G N G L A S p.100
. . . . . . g.68028
CCGCACTCGCAGTATCACACCCCTCCCGTTCCTCAGGTGCCCCATGGTGGCAGTGGTGGC c.360
P H S Q Y H T P P V P Q V P H G G S G G p.120
. . . . . . g.68088
GGTCAGATGGGTGTCTACCCTGGCATGCAGAATGAGAGGCATGGGCAATCCTTTGTGGAC c.420
G Q M G V Y P G M Q N E R H G Q S F V D p.140
. . . . . . g.68148
AGCAGCTCCATGTGGGGCCCCAGGGCTGTTCAGGTACCAGACCAGATACGAGCCCCCTAC c.480
S S S M W G P R A V Q V P D Q I R A P Y p.160
. . . . . . g.68208
CAGCAGCAGCAGCCACAGCCGCAGCCACCGCAGCCGGCTCCGTCGGGGCCCCCTGCACAG c.540
Q Q Q Q P Q P Q P P Q P A P S G P P A Q p.180
. . . . . . g.68268
GGCCACCCTCAGCACATGCAGCAGATGGGCAGCTATATGGCACGTGGGGATTTTTCCATG c.600
G H P Q H M Q Q M G S Y M A R G D F S M p.200
. . . . . . g.68328
CAGCAGCATGGTCAGCCACAGCAGAGGATGAGCCAGTTTTCCCAAGGCCAAGAGGGCCTC c.660
Q Q H G Q P Q Q R M S Q F S Q G Q E G L p.220
. . . . . . g.68388
AATCAGGGAAATCCTTTTATTGCCACCTCAGGACCTGGCCACTTGTCCCACGTGCCCCAG c.720
N Q G N P F I A T S G P G H L S H V P Q p.240
. . . . . . g.68448
CAGAGTCCCAGCATGGCACCTTCCTTGCGTCACTCGGTGCAGCAGTTCCATCACCACCCC c.780
Q S P S M A P S L R H S V Q Q F H H H P p.260
. . . . . . g.68508
TCTACTGCTCTCCATGGAGAATCCGTTGCCCACAGTCCCAGATTCTCCCCGAATCCTCCC c.840
S T A L H G E S V A H S P R F S P N P P p.280
. . . . . . g.68568
CAACAAGGGGCTGTTAGGCCGCAAACCCTTAACTTTAGTTCTCGGAGCCAGACAGTCCCC c.900
Q Q G A V R P Q T L N F S S R S Q T V P p.300
. . . . . . g.68628
TCTCCTACTATAAACAACTCAGGGCAGTATTCTCGATATCCTTACAGTAACCTAAATCAG c.960
S P T I N N S G Q Y S R Y P Y S N L N Q p.320
. . . . . . g.68688
GGATTAGTTAACAATACAGGGATGAATCAAAATTTAGGCCTTACAAATAATACTCCAATG c.1020
G L V N N T G M N Q N L G L T N N T P M p.340
. . . . . . g.68748
AATCAGTCCGTACCAAGATACCCCAATGCTGTAGGATTCCCATCAAACAGTGGTCAAGGA c.1080
N Q S V P R Y P N A V G F P S N S G Q G p.360
. . . . . . g.68808
CTAATGCACCAGCAGCCCATCCACCCCAGTGGCTCACTTAACCAAATGAACACACAAACT c.1140
L M H Q Q P I H P S G S L N Q M N T Q T p.380
. . . . . . g.68868
ATGCATCCTTCACAGCCTCAGGGAACTTATGCCTCTCCACCTCCCATGTCACCCATGAAA c.1200
M H P S Q P Q G T Y A S P P P M S P M K p.400
. . . . . . g.68928
GCAATGAGTAATCCAGCAGGCACTCCTCCTCCACAAGTCAGGCCGGGAAGTGCTGGGATA c.1260
A M S N P A G T P P P Q V R P G S A G I p.420
. . . . . . g.68988
CCAATGGAAGTTGGCAGTTATCCAAATATGCCCCATCCTCAGCCATCTCACCAGCCCCCT c.1320
P M E V G S Y P N M P H P Q P S H Q P P p.440
. . . . . . g.69048
GGTGCCATGGGAATCGGACAGAGGAATATGGGCCCCAGAAACATGCAGCAGTCTCGTCCA c.1380
G A M G I G Q R N M G P R N M Q Q S R P p.460
. . . . . . g.69108
TTTATAGGCATGTCCTCGGCACCAAGGGAATTGACTGGGCACATGAGGCCAAATGGTTGT c.1440
F I G M S S A P R E L T G H M R P N G C p.480
. . . . . . g.69168
CCTGGTGTTGGCCTTGGAGACCCACAAGCAATCCAGGAACGACTGATACCTGGCCAACAA c.1500
P G V G L G D P Q A I Q E R L I P G Q Q p.500
. . . . . . g.69228
CATCCTGGTCAACAGCCATCTTTTCAGCAGTTGCCAACCTGTCCTCCACTGCAGCCTCAC c.1560
H P G Q Q P S F Q Q L P T C P P L Q P H p.520
. . . . . . g.69288
CCGGGCTTGCACCACCAGTCTTCACCTCCACACCCTCATCACCAGCCTTGGGCACAGCTC c.1620
P G L H H Q S S P P H P H H Q P W A Q L p.540
. . . . | 03 . . g.107250
CACCCATCACCCCAGAACACCCCGCAGAAAGTGCCTGTGCATCAG | CATTCCCCGTCGGAG c.1680
H P S P Q N T P Q K V P V H Q | H S P S E p.560
. . . . . . g.107310
CCCTTTCTAGAGAAACCAGTGCCGGATATGACTCAGGTTAGTGGACCGAATGCTCAGCTA c.1740
P F L E K P V P D M T Q V S G P N A Q L p.580
. . . . . . g.107370
GTGAAGAGTGATGATTACCTGCCATCAATAGAACAGCAGCCACAACAAAAGAAGAAGAAA c.1800
V K S D D Y L P S I E Q Q P Q Q K K K K p.600
. . . . . . g.107430
AAGAAAAACAACCACATTGTAGCAGAGGATCCCAGTAAAGGTTTTGGTAAAGATGACTTC c.1860
K K N N H I V A E D P S K G F G K D D F p.620
. . . . . . g.107490
CCTGGTGGGGTAGATAACCAAGAACTAAATAGGAACTCACTGGATGGGTCCCAAGAAGAA c.1920
P G G V D N Q E L N R N S L D G S Q E E p.640
. . . . . . g.107550
AAAAAGAAAAAGAAAAGGTCAAAGGCAAAAAAAGACCCGAAGGAACCGAAAGAACCCAAG c.1980
K K K K K R S K A K K D P K E P K E P K p.660
. . . . . . g.107610
GAGAAAAAAGAGCCCAAGGAACCCAAGACCCCGAAAGCCCCTAAGATTCCCAAAGAGCCA c.2040
E K K E P K E P K T P K A P K I P K E P p.680
. . . . . | 04 . g.121225
AAGGAAAAGAAAGCAAAAACTGCCACGCCAAAACCCAAATCCAGCAAAAAGTCAAG | TAAT c.2100
K E K K A K T A T P K P K S S K K S S | N p.700
. . . . . . g.121285
AAGAAACCTGACTCAGAAGCAAGTGCTTTGAAGAAAAAGGTCAACAAGGGAAAAACAGAA c.2160
K K P D S E A S A L K K K V N K G K T E p.720
. . . . . . g.121345
GGTTCTGAAAATTCAGACTTAGACAAAACACCCCCACCATCTCCTCCTCCTGAAGAAGAT c.2220
G S E N S D L D K T P P P S P P P E E D p.740
. | 05 . . . . g.126665
GAGGACCCAGGTGTTCAG | AAGAGACGGTCCAGCAGACAGGTGAAGAGAAAGCGCTACACT c.2280
E D P G V Q | K R R S S R Q V K R K R Y T p.760
. . . . . . g.126725
GAAGACCTGGAGTTCAAGATTTCTGATGAGGAGGCAGATGATGCAGATGCTGCTGGGAGG c.2340
E D L E F K I S D E E A D D A D A A G R p.780
. . . | 06 . . . g.127787
GATTCCCCCTCCAACACCTCCCAGTCAGAACAGCAG | GAATCTGTTGATGCAGAAGGCCCA c.2400
D S P S N T S Q S E Q Q | E S V D A E G P p.800
. . . . | 07 . . g.134470
GTGGTAGAAAAAATTATGAGCAGTCGTTCAGTAAAAAAGCAG | AAGGAATCTGGAGAGGAG c.2460
V V E K I M S S R S V K K Q | K E S G E E p.820
. . . | 08 . . g.142644
GTAGAAATTGAGGAATTCTATGTGAAATACAAAAACTT | CTCTTATCTTCATTGTCAGTGG c.2520
V E I E E F Y V K Y K N F | S Y L H C Q W p.840
. . . . . . g.142704
GCATCTATAGAAGATCTGGAAAAAGATAAGAGAATTCAGCAAAAAATTAAACGATTTAAG c.2580
A S I E D L E K D K R I Q Q K I K R F K p.860
. . . | 09 . . . g.146269
GCAAAGCAGGGCCAGAACAAGTTCCTTTCAGAG | ATTGAGGATGAGCTTTTTAATCCAGAT c.2640
A K Q G Q N K F L S E | I E D E L F N P D p.880
. . . . . | 10. g.148028
TATGTGGAGGTTGACCGGATAATGGACTTTGCACGTAGCACAGATGACCGGGGAGAG | CCT c.2700
Y V E V D R I M D F A R S T D D R G E | P p.900
. . . . . . g.148088
GTGACTCACTATCTGGTGAAGTGGTGTTCACTTCCTTATGAAGACAGCACGTGGGAGCGG c.2760
V T H Y L V K W C S L P Y E D S T W E R p.920
. . . . . . g.148148
AGGCAGGACATAGATCAAGCAAAGATCGAGGAGTTTGAGAAACTAATGTCCAGGGAGCCG c.2820
R Q D I D Q A K I E E F E K L M S R E P p.940
. | 11 . . . . . g.148304
GAAACAGAGCGTGTG | GAGCGACCTCCTGCTGATGATTGGAAGAAATCGGAGAGTTCCAGG c.2880
E T E R V | E R P P A D D W K K S E S S R p.960
. . . . . . g.148364
GAGTATAAAAACAATAACAAACTCAGGGAATACCAGTTGGAGGGAGTAAACTGGCTACTT c.2940
E Y K N N N K L R E Y Q L E G V N W L L p.980
. | 12. . . . . g.148781
TTCAATTGGTACAACAT | GCGAAACTGCATTTTAGCAGATGAAATGGGTTTGGGAAAAACT c.3000
F N W Y N M | R N C I L A D E M G L G K T p.1000
. . . . . . g.148841
ATCCAGTCCATTACATTTCTCTATGAGATATATTTGAAAGGAATCCATGGCCCTTTTTTA c.3060
I Q S I T F L Y E I Y L K G I H G P F L p.1020
. . . . . . g.148901
GTAATTGCCCCATTGTCCACAATCCCCAACTGGGAAAGGGAATTCCGAACCTGGACAGAG c.3120
V I A P L S T I P N W E R E F R T W T E p.1040
. . . . . . g.148961
TTGAACGTGGTTGTGTATCATGGGAGTCAAGCTAGTCGTCGGACCATTCAGTTGTATGAA c.3180
L N V V V Y H G S Q A S R R T I Q L Y E p.1060
. . | 13 . . . . g.150114
ATGTACTTCAAAGATCCCCAG | GGTCGAGTGATAAAGGGGTCCTATAAGTTTCATGCCATC c.3240
M Y F K D P Q | G R V I K G S Y K F H A I p.1080
. . . . . . g.150174
ATCACTACATTTGAGATGATTTTGACTGATTGTCCTGAGCTGCGGAATATTCCATGGCGC c.3300
I T T F E M I L T D C P E L R N I P W R p.1100
. . . . . . g.150234
TGTGTAGTCATTGATGAAGCCCACAGGCTGAAGAACAGGAACTGCAAGCTGTTGGAGGGA c.3360
C V V I D E A H R L K N R N C K L L E G p.1120
. | 14 . . . . g.154940
CTCAAGATGATGGACTTG | GAACACAAAGTGCTGCTGACGGGAACCCCACTCCAGAACACT c.3420
L K M M D L | E H K V L L T G T P L Q N T p.1140
. . . . . . g.155000
GTGGAAGAACTCTTCAGCTTGCTTCATTTCTTGGAACCAAGTCGCTTCCCTTCAGAAACC c.3480
V E E L F S L L H F L E P S R F P S E T p.1160
. . . . | 15 . . g.156575
ACATTTATGCAAGAATTTGGTGATCTAAAAACAGAAGAGCAG | GTGCAAAAACTTCAAGCT c.3540
T F M Q E F G D L K T E E Q | V Q K L Q A p.1180
. . . . . . g.156635
ATTCTAAAGCCAATGATGTTGAGACGTCTCAAAGAGGATGTAGAAAAGAACTTGGCCCCC c.3600
I L K P M M L R R L K E D V E K N L A P p.1200
. . . . . . g.156695
AAAGAAGAAACTATTATTGAAGTTGAGCTAACAAACATTCAGAAGAAATATTACCGAGCC c.3660
K E E T I I E V E L T N I Q K K Y Y R A p.1220
. . . . . . g.156755
ATCCTTGAGAAGAATTTCACATTTCTTTCCAAAGGCGGTGGTCAAGCTAACGTACCTAAC c.3720
I L E K N F T F L S K G G G Q A N V P N p.1240
. . . . . | 16 g.162310
CTATTAAACACTATGATGGAATTGCGGAAGTGCTGCAATCATCCGTACCTTATCAATG | GT c.3780
L L N T M M E L R K C C N H P Y L I N G | p.1260
. . . . . . g.162370
GCTGAAGAGAAAATTTTGGAAGAGTTTAAAGAAACACACAATGCAGAGTCTCCAGATTTT c.3840
A E E K I L E E F K E T H N A E S P D F p.1280
. . . . . . g.162430
CAGCTCCAGGCAATGATCCAGGCTGCTGGCAAGCTAGTGCTGATTGACAAGCTGCTGCCA c.3900
Q L Q A M I Q A A G K L V L I D K L L P p.1300
. . . . . . g.162490
AAACTGAAGGCTGGTGGCCACAGGGTGCTTATCTTTTCCCAGATGGTGCGCTGCTTGGAC c.3960
K L K A G G H R V L I F S Q M V R C L D p.1320
. . | 17 . . . g.163083
ATACTGGAAGACTACCTCATTCAAAGACG | GTACCCATATGAAAGGATCGACGGCCGAGTA c.4020
I L E D Y L I Q R R | Y P Y E R I D G R V p.1340
. . . . . . g.163143
AGAGGCAACCTCCGCCAGGCAGCTATCGACAGATTCTCCAAACCTGATTCTGATAGGTTT c.4080
R G N L R Q A A I D R F S K P D S D R F p.1360
. . . . . . g.163203
GTTTTCCTCCTGTGTACAAGGGCAGGAGGTTTAGGCATTAACCTCACTGCTGCTGATACC c.4140
V F L L C T R A G G L G I N L T A A D T p.1380
. . . . | 18 . . g.163918
TGCATCATCTTTGATTCAGACTGGAATCCCCAAAATGACCTCCAG | GCTCAGGCTAGATGT c.4200
C I I F D S D W N P Q N D L Q | A Q A R C p.1400
. . . . . . g.163978
CATAGAATAGGACAGAGCAAATCTGTGAAAATCTACAGGCTGATTACAAGAAATTCCTAT c.4260
H R I G Q S K S V K I Y R L I T R N S Y p.1420
. . . . . . g.164038
GAAAGGGAAATGTTCGACAAGGCTAGTTTGAAACTGGGCCTGGATAAAGCTGTGCTACAG c.4320
E R E M F D K A S L K L G L D K A V L Q p.1440
. . . | 19 . . . g.164338
TCTATGAGTGGAAGAGAAAATGCTACCAATGGG | GTACAACAGCTTTCCAAGAAAGAAATA c.4380
S M S G R E N A T N G | V Q Q L S K K E I p.1460
. . . . . . g.164398
GAGGATCTTCTACGAAAAGGGGCCTATGGTGCACTCATGGATGAGGAGGATGAAGGGTCT c.4440
E D L L R K G A Y G A L M D E E D E G S p.1480
. . . . . . g.164458
AAATTCTGTGAAGAAGATATTGATCAGATCCTCCTACGTCGAACCCACACCATTACCATT c.4500
K F C E E D I D Q I L L R R T H T I T I p.1500
. . . | 20 . . . g.167906
GAGTCAGAAGGGAAAGGTTCCACATTTGCTAAG | GCCAGTTTTGTTGCATCTGGAAATAGG c.4560
E S E G K G S T F A K | A S F V A S G N R p.1520
. . . . . . g.167966
ACAGATATTTCCTTGGATGATCCAAATTTCTGGCAAAAGTGGGCTAAGAAGGCTGAATTG c.4620
T D I S L D D P N F W Q K W A K K A E L p.1540
. . | 21 . . . . g.168118
GATATTGATGCCTTAAATGGGAGG | AACAACCTGGTTATTGATACTCCAAGAGTGAGAAAG c.4680
D I D A L N G R | N N L V I D T P R V R K p.1560
. . . . . . g.168178
CAGACCAGGCTCTACAGTGCAGTGAAGGAAGATGAGCTGATGGAGTTCTCAGACTTGGAA c.4740
Q T R L Y S A V K E D E L M E F S D L E p.1580
. . . . . . g.168238
AGTGATTCTGAAGAAAAGCCCTGTGCAAAGCCACGGCGTCCCCAGGATAAGTCACAGGGC c.4800
S D S E E K P C A K P R R P Q D K S Q G p.1600
. . . . . | 22 . g.171109
TATGCAAGGAGTGAATGTTTCAGGGTGGAGAAGAATCTGCTTGTCTATGG | TTGGGGACGG c.4860
Y A R S E C F R V E K N L L V Y G | W G R p.1620
. . . . . . g.171169
TGGACAGACATTCTTTCCCACGGACGCTATAAACGCCAACTCACTGAGCAAGATGTAGAA c.4920
W T D I L S H G R Y K R Q L T E Q D V E p.1640
. . . . . . g.171229
ACCATCTGCAGAACCATCCTGGTGTACTGTCTTAATCATTACAAAGGGGATGAGAATATC c.4980
T I C R T I L V Y C L N H Y K G D E N I p.1660
. . . . . . g.171289
AAAAGCTTCATCTGGGATCTGATCACACCCACAGCGGATGGCCAGACTCGAGCCTTGGTC c.5040
K S F I W D L I T P T A D G Q T R A L V p.1680
. | 23 . . . . . g.171535
AACCATTCCG | GTTTGTCAGCTCCTGTGCCAAGGGGAAGGAAGGGAAAGAAGGTGAAAGCC c.5100
N H S G | L S A P V P R G R K G K K V K A p.1700
. . . . . . g.171595
CAGAGCACACAGCCGGTGGTGCAGGATGCCGACTGGCTGGCCAGCTGCAACCCAGATGCC c.5160
Q S T Q P V V Q D A D W L A S C N P D A p.1720
. . . . . | 24 . g.174760
CTGTTCCAGGAGGACAGCTACAAGAAACACCTGAAGCATCACTGTAACAA | GGTCCTGCTG c.5220
L F Q E D S Y K K H L K H H C N K | V L L p.1740
. . . . . . g.174820
CGTGTCCGCATGCTGTACTACCTAAGACAAGAAGTGATAGGAGACCAGGCGGATAAGATC c.5280
R V R M L Y Y L R Q E V I G D Q A D K I p.1760
. . | 25 . . . . g.175326
TTAGAGGGTGCTGACTCAAG | TGAAGCCGATGTGTGGATCCCTGAACCTTTCCATGCTGAA c.5340
L E G A D S S | E A D V W I P E P F H A E p.1780
. . . . . . g.175386
GTTCCTGCAGATTGGTGGGATAAGGAAGCAGACAAATCCCTCTTAATTGGAGTGTTCAAA c.5400
V P A D W W D K E A D K S L L I G V F K p.1800
| 26 . . . . . . g.176784
CATG | GCTATGAGAAGTACAACTCCATGCGAGCTGACCCCGCGCTGTGCTTTCTGGAACGA c.5460
H G | Y E K Y N S M R A D P A L C F L E R p.1820
. . . . . . g.176844
GTCGGTATGCCTGATGCCAAGGCCATAGCTGCCGAGCAAAGAGGAACAGACATGCTAGCA c.5520
V G M P D A K A I A A E Q R G T D M L A p.1840
. | 27 . . . . . g.177313
GATGGTGGTGACGG | GGGAGAATTTGATAGAGAAGATGAAGACCCAGAATATAAACCAACC c.5580
D G G D G | G E F D R E D E D P E Y K P T p.1860
. . | 28. . . . g.177530
AGAACACCGTTCAAAGATGAAATAGAT | GAATTTGCAAATTCTCCTTCAGAGGATAAGGAA c.5640
R T P F K D E I D | E F A N S P S E D K E p.1880
. . | 29 . . . . g.178289
GAATCCATGGAAATACATGCCACAG | GCAAGCACAGTGAGAGTAATGCTGAGTTAGGCCAA c.5700
E S M E I H A T G | K H S E S N A E L G Q p.1900
. . . . . . g.178349
CTTTACTGGCCTAACACTTCAACCCTGACTACACGTCTGCGCCGGCTCATTACTGCCTAT c.5760
L Y W P N T S T L T T R L R R L I T A Y p.1920
. . . . . . g.178409
CAGCGCAGCTATAAAAGGCAACAGATGAGGCAAGAGGCCCTAATGAAGACTGACCGGCGC c.5820
Q R S Y K R Q Q M R Q E A L M K T D R R p.1940
. . . . . . g.178469
AGACGGCGGCCTCGAGAGGAAGTGAGAGCTCTGGAAGCGGAAAGGGAAGCTATTATATCT c.5880
R R R P R E E V R A L E A E R E A I I S p.1960
. | 30 . . . . . g.178779
GAGAAGCGGCAAAA | GTGGACAAGAAGAGAAGAGGCTGATTTTTACCGTGTGGTATCCACC c.5940
E K R Q K | W T R R E E A D F Y R V V S T p.1980
. . . . . . g.178839
TTTGGGGTTATTTTTGACCCTGTGAAACAGCAATTTGACTGGAACCAATTTAGAGCCTTT c.6000
F G V I F D P V K Q Q F D W N Q F R A F p.2000
. . . . . . g.178899
GCCAGGCTTGACAAAAAATCTGATGAGAGTTTGGAGAAATACTTCAGTTGTTTTGTGGCC c.6060
A R L D K K S D E S L E K Y F S C F V A p.2020
. . . . | 31 . . g.179081
ATGTGTAGGCGAGTATGTCGAATGCCCGTCAAGCCAGATGATG | AACCGCCCGACCTCTCC c.6120
M C R R V C R M P V K P D D E | P P D L S p.2040
. . . . . . g.179141
TCCATAATTGAGCCGATCACAGAGGAGCGAGCCTCTCGAACTCTGTACCGCATTGAGCTG c.6180
S I I E P I T E E R A S R T L Y R I E L p.2060
. . . . . . g.179201
CTACGGAAGATCCGCGAGCAGGTTCTCCATCACCCCCAGCTGGGAGAGAGGCTTAAGCTC c.6240
L R K I R E Q V L H H P Q L G E R L K L p.2080
. . . . . . g.179261
TGCCAGCCAAGCTTGGATCTGCCAGAGTGGTGGGAGTGTGGACGGCATGACCGAGACTTG c.6300
C Q P S L D L P E W W E C G R H D R D L p.2100
. . . . . . g.179321
CTGGTTGGTGCTGCTAAACACGGGGTCAGTCGGACGGATTATCACATCCTCAATGACCCT c.6360
L V G A A K H G V S R T D Y H I L N D P p.2120
. . . . . . g.179381
GAGTTATCCTTCTTGGATGCACATAAAAACTTTGCTCAAAACAGAGGGGCAGGTAATACA c.6420
E L S F L D A H K N F A Q N R G A G N T p.2140
. . . . . . g.179441
TCTTCCTTGAACCCACTGGCAGTTGGATTTGTCCAGACTCCTCCAGTCATCTCATCTGCT c.6480
S S L N P L A V G F V Q T P P V I S S A p.2160
. . . . . . g.179501
CATATTCAAGATGAGAGGGTACTGGAACAAGCCGAAGGCAAAGTGGAGGAGCCTGAAAAC c.6540
H I Q D E R V L E Q A E G K V E E P E N p.2180
. . . . . . g.179561
CCAGCTGCCAAGGAGAAATGTGAGGGCAAAGAAGAGGAAGAAGAAACCGATGGCAGCGGG c.6600
P A A K E K C E G K E E E E E T D G S G p.2200
. . . . . . g.179621
AAGGAGAGCAAGCAGGAATGTGAGGCAGAGGCCAGCTCTGTGAAAAATGAACTGAAAGGT c.6660
K E S K Q E C E A E A S S V K N E L K G p.2220
. . . . . . g.179681
GTTGAGGTCGGCGCAGACACTGGGTCCAAATCTATTTCAGAGAAAGGTTCCGAAGAGGAT c.6720
V E V G A D T G S K S I S E K G S E E D p.2240
. . . . . | 32 . g.180603
GAAGAGGAAAAGCTGGAGGATGACGATAAGTCGGAAGAGTCTTCCCAGCCCGAAG | CAGGA c.6780
E E E K L E D D D K S E E S S Q P E A | G p.2260
. . . . . . g.180663
GCTGTCTCTAGAGGGAAGAATTTTGATGAAGAAAGCAATGCTTCCATGAGCACTGCTAGA c.6840
A V S R G K N F D E E S N A S M S T A R p.2280
. . . . . . g.180723
GATGAAACCCGAGATGGATTCTACATGGAGGACGGAGATCCTTCAGTAGCTCAGCTCCTT c.6900
D E T R D G F Y M E D G D P S V A Q L L p.2300
. . . | 33 . . . g.182234
CATGAAAGAACATTTGCCTTCTCGTTTTGGCCTAAG | GATAGAGTAATGATAAACCGCTTA c.6960
H E R T F A F S F W P K | D R V M I N R L p.2320
. . . . . . g.182294
GACAACATCTGTGAAGCAGTGTTGAAAGGCAAATGGCCAGTAAATAGGCGCCAGATGTTT c.7020
D N I C E A V L K G K W P V N R R Q M F p.2340
. . . . . . g.182354
GATTTCCAAGGCCTCATCCCAGGTTACACACCCACCACAGTGGACAGCCCCTTGCAGAAG c.7080
D F Q G L I P G Y T P T T V D S P L Q K p.2360
. . . . . . g.182414
AGGAGCTTTGCTGAGCTCTCCATGGTCGGCCAAGCCAGCATTAGTGGGAGTGAGGACATC c.7140
R S F A E L S M V G Q A S I S G S E D I p.2380
. . | 34 . . . . g.182716
ACTACGTCTCCTCAGTTGTCAAAG | GAAGATGCCCTCAACCTCTCTGTCCCTCGCCAGCGG c.7200
T T S P Q L S K | E D A L N L S V P R Q R p.2400
. . . . . . g.182776
AGGAGGAGGAGGAGAAAAATCGAAATTGAGGCCGAAAGAGCTGCCAAGAGGCGAAATCTC c.7260
R R R R R K I E I E A E R A A K R R N L p.2420
. . . . . . g.182836
ATGGAGATGGTTGCCCAGCTTCGAGAGTCTCAGGTGGTCTCAGAAAATGGACAAGAAAAA c.7320
M E M V A Q L R E S Q V V S E N G Q E K p.2440
. . . . . . g.182896
GTTGTAGATTTATCAAAGGCCTCAAGAGAGGCAACAAGCTCTACCTCAAATTTTTCATCT c.7380
V V D L S K A S R E A T S S T S N F S S p.2460
. . . . . . g.182956
CTTTCTTCAAAGTTTATCTTGCCTAATGTCTCAACACCAGTGTCTGATGCCTTTAAGACT c.7440
L S S K F I L P N V S T P V S D A F K T p.2480
. . . . . . g.183016
CAAATGGAACTGCTCCAAGCAGGCCTTTCGCGCACACCCACAAGGCATCTCCTTAATGGC c.7500
Q M E L L Q A G L S R T P T R H L L N G p.2500
. . . . . . g.183076
TCCCTAGTGGATGGAGAGCCTCCCATGAAGAGGAGGCGGGGAAGGAGGAAAAATGTGGAG c.7560
S L V D G E P P M K R R R G R R K N V E p.2520
. . . . | 35 . g.187151
GGACTTGATCTGCTTTTCATGAGCCACAAACGGACGTCATTGAGTGCA | GAGGATGCTGAG c.7620
G L D L L F M S H K R T S L S A | E D A E p.2540
. . . . . . g.187211
GTGACCAAAGCTTTTGAAGAAGATATAGAGACCCCACCAACAAGAAACATTCCTTCTCCC c.7680
V T K A F E E D I E T P P T R N I P S P p.2560
. . . . . . g.187271
GGACAGCTGGACCCAGACACACGGATCCCTGTTATCAATCTTGAAGATGGGACTAGGCTG c.7740
G Q L D P D T R I P V I N L E D G T R L p.2580
. . . . . . g.187331
GTGGGGGAAGATGCTCCTAAAAATAAGGATTTAGTTGAATGGCTGAAGCTGCACCCTACT c.7800
V G E D A P K N K D L V E W L K L H P T p.2600
. . . | 36 . . . g.188461
TACACTGTTGATATGCCAAGTTATGTACCA | AAGAATGCAGATGTGCTGTTTTCCTCATTT c.7860
Y T V D M P S Y V P | K N A D V L F S S F p.2620
. . . . . . g.188521
CAGAAACCGAAACAGAAACGACATAGATGTCGAAACCCTAATAAATTGGATATAAACACT c.7920
Q K P K Q K R H R C R N P N K L D I N T p.2640
. . . . . | 37 . g.188792
TTGACAGGAGAAGAAAGGGTGCCTGTTGTCAATAAACGAAATGGGAAGAAG | ATGGGTGGA c.7980
L T G E E R V P V V N K R N G K K | M G G p.2660
. . . . . . g.188852
GCTATGGCGCCTCCAATGAAGGATCTACCCAGGTGGCTGGAAGAAAATCCTGAATTTGCA c.8040
A M A P P M K D L P R W L E E N P E F A p.2680
. . . | 38 . . . g.191275
GTTGCTCCAGACTGGACTGATATAGTTAAGCAGTCT | GGTTTTGTTCCTGAGTCGATGTTT c.8100
V A P D W T D I V K Q S | G F V P E S M F p.2700
. . . . . . g.191335
GACCGCCTTCTCACTGGGCCTGTAGTGCGGGGAGAGGGAGCGAGCAGAAGAGGAAGAAGG c.8160
D R L L T G P V V R G E G A S R R G R R p.2720
. . . . . . g.191395
CCCAAAAGTGAGATCGCCAGAGCAGCCGCGGCCGCCGCTGCTGTGGCCTCCACGTCAGGG c.8220
P K S E I A R A A A A A A A V A S T S G p.2740
. . . . . . g.191455
ATCAACCCTTTGCTGGTGAACAGCCTGTTTGCTGGAATGGACCTGACGAGCCTTCAGAAT c.8280
I N P L L V N S L F A G M D L T S L Q N p.2760
. . . . . . g.191515
CTCCAGAATCTCCAGTCGCTCCAGCTGGCAGGCCTCATGGGCTTCCCTCCAGGACTGGCA c.8340
L Q N L Q S L Q L A G L M G F P P G L A p.2780
. . . . . . g.191575
ACAGCTGCCACCGCCGGAGGCGATGCGAAGAACCCTGCTGCTGTGCTGCCCCTGATGCTG c.8400
T A A T A G G D A K N P A A V L P L M L p.2800
. . . . . . g.191635
CCAGGAATGGCGGGCCTGCCCAACGTGTTTGGCTTGGGCGGGCTGTTGAATAACCCTCTG c.8460
P G M A G L P N V F G L G G L L N N P L p.2820
. . . . . . g.191695
TCAGCTGCTACTGGAAACACCACTACTGCTTCTAGTCAAGGAGAACCGGAAGACAGCACT c.8520
S A A T G N T T T A S S Q G E P E D S T p.2840
. . . . . . g.191755
TCAAAAGGAGAGGAGAAAGGAAATGAGAATGAAGACGAGAACAAAGACTCTGAGAAAAGC c.8580
S K G E E K G N E N E D E N K D S E K S p.2860
. . . . . . g.191815
ACAGATGCTGTTTCGGCTGCTGACTCTGCGAATGGATCTGTTGGTGCTGCTACTGCCCCG c.8640
T D A V S A A D S A N G S V G A A T A P p.2880
. . . . . . g.191875
GCTGGATTGCCCTCAAACCCGCTAGCCTTCAACCCTTTCCTCCTGTCCACAATGGCCCCG c.8700
A G L P S N P L A F N P F L L S T M A P p.2900
. . . . . . g.191935
GGCCTCTTCTACCCATCCATGTTTCTACCTCCAGGACTGGGGGGATTGACGCTGCCTGGG c.8760
G L F Y P S M F L P P G L G G L T L P G p.2920
. . . . . . g.191995
TTCCCAGCATTGGCAGGACTTCAGAATGCCGTGGGCTCCAGCGAAGAAAAGGCTGCTGAC c.8820
F P A L A G L Q N A V G S S E E K A A D p.2940
. . . . . . g.192055
AAGGCTGAGGGAGGACCCTTTAAAGATGGAGAGACCCTTGAAGGCAGCGATGCCGAGGAG c.8880
K A E G G P F K D G E T L E G S D A E E p.2960
. . . . . . g.192115
AGCCTGGATAAGACTGCAGAGTCCTCCCTCTTAGAAGACGAAATAGCACAGGGTGAAGAG c.8940
S L D K T A E S S L L E D E I A Q G E E p.2980
. . . . . g.192169
CTAGACTCACTTGATGGGGGGGATGAAATAGAAAACAATGAAAATGATGAATAA c.8994
L D S L D G G D E I E N N E N D E X p.2997
. . . . . . g.192229
ccagtaccagttccagttcaagtgtttaaaacttttgacaagtggtagtcctactgttta c.*60
. . . . . . g.192289
cactcacagttaatgttcatacctagttttataagctgttctgtaacatagtgtagcaaa c.*120
. . . . . . g.192349
aaaaaaagttcaagtcatgttatacaggtgtgtcaaaaggtatcttggtcattaagtatt c.*180
. . . . . . g.192409
gtgcagtgcattatttattatccctaggagagatgaaatttgagaggtgatcatgtcttt c.*240
. . . . . . g.192469
ttaaggaaacttacataatgctctgctttttttttttctcttggtaccattggtattata c.*300
. . . . . . g.192529
ataaagagcaatttgtaactgagtggcactaatggaagaaagtgctgctcaaaggaagta c.*360
. . . . . . g.192589
tgaagttatatatttaattttttaattttaatttttaatttttttgctgtgaaggtcaag c.*420
. . . . . . g.192649
ctgaaatttaccatacatatcatacttgctcatttgtttccctttttgactgtatggggg c.*480
. . . . . . g.192709
ttcccacactcgtgcatacacacacatccatacactctgacaatctccacgctagtgtga c.*540
. . . . . . g.192769
acgcctctgtcccgaggcgcagcaataataaggcagctgttgaatgtgaagggtcccttt c.*600
. . . . . . g.192829
ggaaaattaacctactgggagggttcttgccagacagaactacagttccattgtctcgtg c.*660
. . . . . . g.192889
gtcttgtaatgcactggtaaaaacaaaataaatagatgaataaataaagagtgagagaag c.*720
. . . . . . g.192949
agagaatcaggtaccttttttaaattaaaggactttgttactttagccacaaagctaaaa c.*780
. . . . . . g.193009
cagcattacctcagctctaaactagccttgaagtttacagacatgactttgtaaatgtat c.*840
. . . . . . g.193069
tgtttttctttgttgtgatgtccttttatttttttctttgaaaactgctatcatgtaaga c.*900
. . . . . . g.193129
taaaatgtaaattgctgccaactgtagtaatgatgcttttaataaaagtgacccatgata c.*960
. . . . . . g.193189
tgcagagatgtaattatagaatgtagtatatagggaaactggtgttcactctattttttt c.*1020
. . . . . . g.193249
tgtattcgcaatagatgcaaatacagcattctggcttttgtacagtttcttgatatatcc c.*1080
. . . . . . g.193309
tcttatactagattagcttttggtaagacactaaactgtctcgaagactagacaggaagg c.*1140
. . . . . . g.193369
aaaaccttgaattactctcacataattccactccagatatctcaacagaaatgcatacaa c.*1200
. . . . . . g.193429
aaagctcctattactccctcaaaagggcatctgagaccgagaatacttagaaatgtgtgc c.*1260
. . . . . . g.193489
agcgtgtgataatgtggtacactgaagaacaaaagggcaaaagaaaaatgaggctttaac c.*1320
. . . . . . g.193549
aggcacaatatctaggtcatttatccttggttaatgggtagaaaaacacaatgcggtagt c.*1380
. . . . . . g.193609
gtcagcaagggacacaaaggcactctggtgtcctgcagaccagcgctcgatgccagaaac c.*1440
. . . . . . g.193669
cagtgtgtggaaaaacccatgtggaattgaaacagacccacttaagcacgcacgcgcgca c.*1500
. . . . . . g.193729
cgcacggtctcaggagctactgatttgtggacccctttttgacctttggtatttaaagta c.*1560
. . . . . . g.193789
aaatataatttgagatctactgttttcacctttttatgtcacctgaaccaacacaaagcc c.*1620
. . . . . . g.193849
atatttccatccagttaaaaagcaggggaagggatgtggacgagagtgtttcgtgtgtgt c.*1680
. . . . . . g.193909
tgccttcctccacacccttcccccaggacgtccgcacacagtccacctccagccagtgtg c.*1740
. . . . . . g.193969
ctgccagacaggtggtctaaattcctcccagactgtgagattcagttcgtttatgcccca c.*1800
. . . . . . g.194029
agatgaaaatatgccccttaatgattctgggaaagaaacaacctgaaccctccaccttac c.*1860
. . . . . . g.194089
agatcctgtgattgcttttatttatcatcgtcgttgtctgctgaaagtgaatgggccgtg c.*1920
. . . . . . g.194149
cacactggaggaaagtgccttgaagagaatattttttgaaagggaattatttgaacacgg c.*1980
. . . . . . g.194209
gaaagtgaaactaggtctgcatgaagtataggaaatttaagtatttaagtaacaaagatg c.*2040
. . . . . g.194264
ttagcagggagaatttgcttaataaaatgagtcattaaagggtgttttttttaaa c.*2095
(downstream sequence)
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