CCR4-NOT transcription complex, subunit 1 (CNOT1) - coding DNA reference sequence

(used for variant description)

(last modified June 27, 2020)


This file was created to facilitate the description of sequence variants on transcript NM_016284.4 in the CNOT1 gene based on a coding DNA reference sequence following the HGVS recommendations.

The sequence was taken from NC_000016.9, covering CNOT1 transcript NM_016284.4.


Please note that introns are available by clicking on the exon numbers above the sequence.
 (upstream sequence)
                               .         .         .                g.5033
                            gaaatgggaacggggaggggaaaggccgcgacg       c.-301

 .         .         .         .         .         .                g.5093
 tgagcgcgcgacctccggcgccattttgtagagaaacaagcggagttaaccgaagagggg       c.-241

 .         .         .         .         .         .                g.5153
 gtcgaggagagccggagtcggggacccaggagtttcctgtgtccagcgctgccggagccg       c.-181

 .      | 02  .         .         .         .         .             g.35429
 cctgag | gtgccatgtttcagaacagagtaagacccctggtaaagaagaactgaagatatt    c.-121

 .         .         .         .         .         .                g.35489
 atacagataccagatatagcctaattacaaagaaagcattaacctgcctctgaggtgact       c.-61

 .         .         .         .         .         .                g.35549
 aaaggggaataatggtgattttgcgccgggctcggccgcctgcttccgccccaaccagca       c.-1

          .         .         .         .         .         .       g.35609
 ATGAATCTTGACTCGCTCTCGCTGGCCTTGTCTCAAATCAGCTACCTGGTGGACAATTTA       c.60
 M  N  L  D  S  L  S  L  A  L  S  Q  I  S  Y  L  V  D  N  L         p.20

          .         .         .         .   | 03     .         .    g.45998
 ACCAAGAAAAATTACCGAGCCAGCCAGCAGGAAATACAGCAT | ATTGTGAATCGGCACGGT    c.120
 T  K  K  N  Y  R  A  S  Q  Q  E  I  Q  H   | I  V  N  R  H  G      p.40

          .         .         .         .         .         .       g.46058
 CCTGAGGCAGACAGGCATTTATTACGCTGCCTATTTTCGCATGTGGATTTCAGTGGCGAT       c.180
 P  E  A  D  R  H  L  L  R  C  L  F  S  H  V  D  F  S  G  D         p.60

          .         .         . | 04       .         .         .    g.47038
 GGTAAAAGCAGTGGCAAAGATTTCCATCAG | ACTCAGTTTCTGATTCAGGAGTGTGCGTTG    c.240
 G  K  S  S  G  K  D  F  H  Q   | T  Q  F  L  I  Q  E  C  A  L      p.80

          .         .         .         .         .         .       g.47098
 CTGATTACAAAGCCAAATTTTATCTCGACGCTGTCCTATGCCATTGATAATCCATTGCAC       c.300
 L  I  T  K  P  N  F  I  S  T  L  S  Y  A  I  D  N  P  L  H         p.100

           | 05        .         .         .         .         .    g.47524
 TATCAGAAG | AGTTTAAAGCCTGCACCCCACTTATTTGCCCAGCTGAGTAAAGTGCTCAAA    c.360
 Y  Q  K   | S  L  K  P  A  P  H  L  F  A  Q  L  S  K  V  L  K      p.120

          .         | 06         .         .         .         .    g.47673
 TTAAGCAAAGTACAAGAG | GTAATTTTTGGCCTTGCCCTGTTGAATTCTTCCAGCTCAGAT    c.420
 L  S  K  V  Q  E   | V  I  F  G  L  A  L  L  N  S  S  S  S  D      p.140

          .    | 07    .         .         .         .         .    g.48185
 CTTAGAGGTTTCG | CTGCCCAGTTTATCAAACAGAAGCTTCCAGATCTTCTGCGTTCTTAC    c.480
 L  R  G  F  A |   A  Q  F  I  K  Q  K  L  P  D  L  L  R  S  Y      p.160

          .         .         .         .         .         .       g.48245
 ATTGACGCAGACGTCAGTGGAAATCAAGAAGGTGGCTTCCAAGATATAGCAATAGAGGTC       c.540
 I  D  A  D  V  S  G  N  Q  E  G  G  F  Q  D  I  A  I  E  V         p.180

          .         .         .         .         .         .       g.48305
 CTACACCTCCTCCTCTCCCATCTCCTCTTTGGGCAGAAGGGAGCCTTTGGAGTTGGACAA       c.600
 L  H  L  L  L  S  H  L  L  F  G  Q  K  G  A  F  G  V  G  Q         p.200

          .         .         .        | 08.         .         .    g.49403
 GAACAGATAGACGCTTTTCTTAAGACGCTGCGCAGAG | ATTTTCCCCAAGAACGCTGTCCC    c.660
 E  Q  I  D  A  F  L  K  T  L  R  R  D |   F  P  Q  E  R  C  P      p.220

          .         .         .         .         .         .       g.49463
 GTGGTGCTCGCACCACTTTTATACCCTGAAAAACGGGACATTCTAATGGACAGGATCCTG       c.720
 V  V  L  A  P  L  L  Y  P  E  K  R  D  I  L  M  D  R  I  L         p.240

          .         .         .         .         .         .       g.49523
 CCTGATTCCGGAGGGGTAGCTAAAACCATGATGGAGAGCTCTTTGGCTGATTTCATGCAA       c.780
 P  D  S  G  G  V  A  K  T  M  M  E  S  S  L  A  D  F  M  Q         p.260

          .         .       | 09 .         .         .         .    g.51738
 GAAGTAGGCTATGGCTTTTGTGCAAG | TATTGAAGAATGTCGCAATATAATCGTGCAGTTT    c.840
 E  V  G  Y  G  F  C  A  S  |  I  E  E  C  R  N  I  I  V  Q  F      p.280

          .         .         .         .         .         .       g.51798
 GGTGTTCGGGAGGTCACAGCTGCCCAGGTTGCAAGGGTTTTGGGAATGATGGCTCGAACT       c.900
 G  V  R  E  V  T  A  A  Q  V  A  R  V  L  G  M  M  A  R  T         p.300

          .         .         .    | 10    .         .         .    g.52010
 CATTCAGGATTAACAGATGGCATTCCATTACAG | AGTATTTCTGCTCCGGGCAGTGGGATC    c.960
 H  S  G  L  T  D  G  I  P  L  Q   | S  I  S  A  P  G  S  G  I      p.320

          .         .         .         .         .         .       g.52070
 TGGAGTGATGGGAAAGATAAAAGTGATGGAGCACAGGCACACACATGGAATGTAGAAGTC       c.1020
 W  S  D  G  K  D  K  S  D  G  A  Q  A  H  T  W  N  V  E  V         p.340

          .         .     | 11   .         .         .         .    g.53407
 TTGATTGACGTTCTTAAAGAACTG | AATCCAAGTTTGAATTTCAAGGAAGTAACTTATGAA    c.1080
 L  I  D  V  L  K  E  L   | N  P  S  L  N  F  K  E  V  T  Y  E      p.360

          .         .         .         .         .         .       g.53467
 CTGGACCATCCTGGATTTCAAATTCGTGACAGTAAAGGACTTCATAATGTGGTTTATGGC       c.1140
 L  D  H  P  G  F  Q  I  R  D  S  K  G  L  H  N  V  V  Y  G         p.380

          .         .         .         .         .         .       g.53527
 ATTCAGAGGGGTTTGGGTATGGAAGTGTTCCCAGTAGACCTCATATATAGACCTTGGAAA       c.1200
 I  Q  R  G  L  G  M  E  V  F  P  V  D  L  I  Y  R  P  W  K         p.400

          .      | 12  .         .         .         .         .    g.54171
 CATGCTGAAGGCCAG | CTCTCCTTCATTCAACATTCCCTTATAAATCCAGAGATCTTCTGT    c.1260
 H  A  E  G  Q   | L  S  F  I  Q  H  S  L  I  N  P  E  I  F  C      p.420

          .         .         .         .         .         .       g.54231
 TTTGCTGACTATCCCTGTCATACTGTTGCCACTGATATTCTGAAAGCACCACCAGAGGAT       c.1320
 F  A  D  Y  P  C  H  T  V  A  T  D  I  L  K  A  P  P  E  D         p.440

          .         .    | 13    .         .         .         .    g.55984
 GACAATCGAGAAATTGCCACATG | GAAGAGCTTGGATTTGATTGAATCTCTGCTGAGGCTT    c.1380
 D  N  R  E  I  A  T  W  |  K  S  L  D  L  I  E  S  L  L  R  L      p.460

          .         .         .         .         .         .       g.56044
 GCAGAGGTTGGGCAGTATGAGCAAGTCAAACAGCTCTTCAGCTTCCCTATCAAACACTGT       c.1440
 A  E  V  G  Q  Y  E  Q  V  K  Q  L  F  S  F  P  I  K  H  C         p.480

          .         .         .         .         .         .       g.56104
 CCAGACATGCTGGTATTGGCCTTACTACAAATTAACACCTCTTGGCATACCTTGCGCCAT       c.1500
 P  D  M  L  V  L  A  L  L  Q  I  N  T  S  W  H  T  L  R  H         p.500

          .         .         .         .         .         .       g.56164
 GAACTTATCTCCACTCTGATGCCAATTTTCCTTGGAAACCATCCTAACTCAGCTATTATT       c.1560
 E  L  I  S  T  L  M  P  I  F  L  G  N  H  P  N  S  A  I  I         p.520

          .         .     | 14   .         .         .         .    g.58340
 TTGCACTATGCATGGCATGGGCAG | GGACAGTCTCCCTCAATTCGCCAACTTATCATGCAT    c.1620
 L  H  Y  A  W  H  G  Q   | G  Q  S  P  S  I  R  Q  L  I  M  H      p.540

          .         .         .         .         .         .       g.58400
 GCAATGGCAGAATGGTACATGAGAGGGGAGCAGTATGATCAGGCCAAATTGTCTCGAATA       c.1680
 A  M  A  E  W  Y  M  R  G  E  Q  Y  D  Q  A  K  L  S  R  I         p.560

          .         .     | 15   .         .         .         .    g.59793
 CTTGATGTGGCCCAGGACTTGAAG | GCCTTGTCAATGCTGCTAAATGGTACTCCATTTGCC    c.1740
 L  D  V  A  Q  D  L  K   | A  L  S  M  L  L  N  G  T  P  F  A      p.580

          .         .         .         .         .         .       g.59853
 TTTGTTATTGACCTTGCTGCACTTGCTTCACGTCGTGAATACCTCAAACTTGATAAGTGG       c.1800
 F  V  I  D  L  A  A  L  A  S  R  R  E  Y  L  K  L  D  K  W         p.600

          .         .        | 16.         .         .         .    g.60159
 CTCACAGATAAAATTCGAGAGCATGGG | GAGCCTTTTATCCAGGCGTGTATGACTTTTTTA    c.1860
 L  T  D  K  I  R  E  H  G   | E  P  F  I  Q  A  C  M  T  F  L      p.620

          .         .         .         .         .         .       g.60219
 AAGAGACGGTGTCCTTCTATTTTGGGCGGACTTGCCCCAGAAAAAGACCAGCCCAAAAGT       c.1920
 K  R  R  C  P  S  I  L  G  G  L  A  P  E  K  D  Q  P  K  S         p.640

          .         .         .         .         .          | 17    g.74525
 GCTCAACTTCCTCCAGAAACTTTGGCGACAATGTTGGCCTGTCTGCAAGCTTGTGCAGG | G    c.1980
 A  Q  L  P  P  E  T  L  A  T  M  L  A  C  L  Q  A  C  A  G  |      p.660

          .         .         .         .         .         .       g.74585
 AGTGTTTCTCAGGAGCTATCAGAAACTATCCTCACCATGGTAGCCAATTGCAGTAATGTT       c.2040
 S  V  S  Q  E  L  S  E  T  I  L  T  M  V  A  N  C  S  N  V         p.680

          .         .         .         .         .         .       g.74645
 ATGAATAAGGCCAGACAACCACCACCTGGAGTTATGCCAAAAGGACGTCCTCCTAGTGCT       c.2100
 M  N  K  A  R  Q  P  P  P  G  V  M  P  K  G  R  P  P  S  A         p.700

          .         .         . | 18       .         .         .    g.76242
 AGCAGCTTAGATGCCATTTCTCCTGTTCAG | ATTGACCCTCTTGCTGGAATGACATCTCTT    c.2160
 S  S  L  D  A  I  S  P  V  Q   | I  D  P  L  A  G  M  T  S  L      p.720

          .         .         .         .         .         .       g.76302
 AGTATAGGTGGTTCAGCTGCCCCTCACACCCAGAGTATGCAGGGTTTTCCTCCAAATTTG       c.2220
 S  I  G  G  S  A  A  P  H  T  Q  S  M  Q  G  F  P  P  N  L         p.740

          .         .         .         .         .         .       g.76362
 GGTTCTGCATTCAGTACCCCTCAGTCACCAGCAAAAGCATTTCCACCCCTTTCAACCCCC       c.2280
 G  S  A  F  S  T  P  Q  S  P  A  K  A  F  P  P  L  S  T  P         p.760

          .         .         .         .         .   | 19     .    g.77901
 AATCAGACCACTGCATTCAGTGGTATTGGAGGACTTTCATCACAGCTTCCAG | TAGGTGGT    c.2340
 N  Q  T  T  A  F  S  G  I  G  G  L  S  S  Q  L  P  V |   G  G      p.780

          .         .         .         .         .         .       g.77961
 CTTGGCACAGGCAGCCTGACTGGTATAGGAACTGGTGCTCTTGGACTCCCTGCAGTGAAT       c.2400
 L  G  T  G  S  L  T  G  I  G  T  G  A  L  G  L  P  A  V  N         p.800

          .         .         .         .         .         .       g.78021
 AACGACCCTTTTGTACAGAGGAAACTGGGCACCTCTGGACTGAATCAGCCTACATTCCAG       c.2460
 N  D  P  F  V  Q  R  K  L  G  T  S  G  L  N  Q  P  T  F  Q         p.820

          .          | 20        .         .         .         .    g.79019
 CAGAGTAAGATGAAACCTT | CGGACTTGTCTCAGGTGTGGCCAGAGGCAAACCAGCACTTT    c.2520
 Q  S  K  M  K  P  S |   D  L  S  Q  V  W  P  E  A  N  Q  H  F      p.840

          .         .         .         .         .         .       g.79079
 AGTAAAGAGATAGATGATGAAGCAAACAGCTATTTCCAGCGAATATATAATCATCCACCA       c.2580
 S  K  E  I  D  D  E  A  N  S  Y  F  Q  R  I  Y  N  H  P  P         p.860

          .         .     | 21   .         .         .         .    g.79385
 CATCCAACCATGTCTGTTGATGAG | GTATTAGAAATGCTGCAGAGATTTAAAGACTCTACT    c.2640
 H  P  T  M  S  V  D  E   | V  L  E  M  L  Q  R  F  K  D  S  T      p.880

          .         .         .         .         .         .       g.79445
 ATAAAGAGGGAACGAGAAGTATTTAACTGTATGCTAAGGAACTTGTTTGAAGAATATCGT       c.2700
 I  K  R  E  R  E  V  F  N  C  M  L  R  N  L  F  E  E  Y  R         p.900

          .         .         .         .         .         .       g.79505
 TTTTTTCCCCAGTATCCTGATAAAGAGTTACATATAACAGCCTGCCTATTTGGTGGTATA       c.2760
 F  F  P  Q  Y  P  D  K  E  L  H  I  T  A  C  L  F  G  G  I         p.920

          .         .         .         .         .         .       g.79565
 ATTGAGAAAGGACTGGTCACTTACATGGCACTAGGTCTGGCTCTACGATATGTTCTTGAA       c.2820
 I  E  K  G  L  V  T  Y  M  A  L  G  L  A  L  R  Y  V  L  E         p.940

          .         .         .         .         .         .       g.79625
 GCCTTACGCAAGCCTTTTGGATCCAAAATGTATTATTTCGGGATTGCTGCACTAGATAGA       c.2880
 A  L  R  K  P  F  G  S  K  M  Y  Y  F  G  I  A  A  L  D  R         p.960

          .  | 22      .         .         .         .         .    g.81075
 TTTAAAAACAG | ATTGAAGGACTATCCCCAGTATTGTCAGCATTTGGCTTCTATCAGTCAC    c.2940
 F  K  N  R  |  L  K  D  Y  P  Q  Y  C  Q  H  L  A  S  I  S  H      p.980

          .         .         . | 23       .         .         .    g.83097
 TTTATGCAATTTCCACATCATTTACAGGAG | TATATTGAGTATGGACAGCAGTCTAGAGAT    c.3000
 F  M  Q  F  P  H  H  L  Q  E   | Y  I  E  Y  G  Q  Q  S  R  D      p.1000

          .         .         .         .         .         .       g.83157
 CCTCCTGTGAAAATGCAAGGCTCTATCACAACCCCTGGAAGTATTGCACTGGCTCAGGCC       c.3060
 P  P  V  K  M  Q  G  S  I  T  T  P  G  S  I  A  L  A  Q  A         p.1020

          .         .         .         .         .         .       g.83217
 CAGGCTCAGGCCCAGGTTCCAGCAAAAGCTCCTCTTGCTGGTCAAGTTAGCACTATGGTA       c.3120
 Q  A  Q  A  Q  V  P  A  K  A  P  L  A  G  Q  V  S  T  M  V         p.1040

          .         .         .         .         .         .       g.83277
 ACCACCTCAACAACTACCACTGTTGCTAAAACGGTTACGGTCACCAGGCCAACTGGAGTC       c.3180
 T  T  S  T  T  T  T  V  A  K  T  V  T  V  T  R  P  T  G  V         p.1060

          .         .  | 24      .         .         .         .    g.83653
 AGCTTTAAGAAAGATGTGCCA | CCTTCTATTAATACTACAAATATAGATACGTTGCTTGTG    c.3240
 S  F  K  K  D  V  P   | P  S  I  N  T  T  N  I  D  T  L  L  V      p.1080

          .         .         .         .         .         .       g.83713
 GCCACAGATCAAACTGAGAGAATTGTGGAGCCCCCAGAAAATATCCAGGAGAAAATTGCT       c.3300
 A  T  D  Q  T  E  R  I  V  E  P  P  E  N  I  Q  E  K  I  A         p.1100

          .         .         .         .   | 25     .         .    g.85006
 TTTATTTTCAATAATCTCTCACAGTCAAATATGACACAAAAG | GTTGAAGAGCTAAAGGAA    c.3360
 F  I  F  N  N  L  S  Q  S  N  M  T  Q  K   | V  E  E  L  K  E      p.1120

          .         .         .         .         .         .       g.85066
 ACGGTGAAAGAAGAATTTATGCCTTGGGTTTCACAGTATCTGGTTATGAAGAGAGTCAGT       c.3420
 T  V  K  E  E  F  M  P  W  V  S  Q  Y  L  V  M  K  R  V  S         p.1140

          .         .         .         .         .         .       g.85126
 ATTGAGCCAAACTTTCATAGCCTGTATTCAAACTTCCTTGACACGCTGAAGAATCCTGAA       c.3480
 I  E  P  N  F  H  S  L  Y  S  N  F  L  D  T  L  K  N  P  E         p.1160

          .         .         .         .   | 26     .         .    g.87222
 TTTAACAAGATGGTTCTGAATGAGACCTACAGAAACATTAAA | GTGCTCCTGACCTCTGAT    c.3540
 F  N  K  M  V  L  N  E  T  Y  R  N  I  K   | V  L  L  T  S  D      p.1180

          .         .         .         .         .         .       g.87282
 AAAGCTGCAGCCAATTTCTCAGATCGTTCTTTGCTGAAGAACTTGGGACATTGGCTAGGA       c.3600
 K  A  A  A  N  F  S  D  R  S  L  L  K  N  L  G  H  W  L  G         p.1200

          .         .         .          | 27        .         .    g.87611
 ATGATCACATTAGCTAAAAACAAACCCATCTTACACACT | GACTTGGATGTGAAATCATTG    c.3660
 M  I  T  L  A  K  N  K  P  I  L  H  T   | D  L  D  V  K  S  L      p.1220

          .         .         .         .         .         .       g.87671
 CTGCTAGAGGCTTATGTTAAAGGACAACAAGAATTGCTCTATGTAGTGCCCTTTGTTGCC       c.3720
 L  L  E  A  Y  V  K  G  Q  Q  E  L  L  Y  V  V  P  F  V  A         p.1240

          .         .         . | 28       .         .         .    g.88167
 AAAGTCTTAGAATCTAGCATTCGTAGTGTG | GTTTTTAGGCCACCAAACCCTTGGACAATG    c.3780
 K  V  L  E  S  S  I  R  S  V   | V  F  R  P  P  N  P  W  T  M      p.1260

          .         .         .         .         | 29         .    g.88400
 GCAATTATGAATGTATTAGCTGAGCTACATCAGGAGCATGACTTAAAG | TTAAACTTGAAG    c.3840
 A  I  M  N  V  L  A  E  L  H  Q  E  H  D  L  K   | L  N  L  K      p.1280

          .         .         .         .         .         .       g.88460
 TTTGAAATCGAGGTTCTCTGCAAGAACCTTGCATTAGACATCAATGAGCTAAAACCTGGA       c.3900
 F  E  I  E  V  L  C  K  N  L  A  L  D  I  N  E  L  K  P  G         p.1300

          .         .         .         .         .         .       g.88520
 AACCTCCTAAAGGATAAAGATCGCCTGAAGAATTTAGATGAGCAACTCTCTGCTCCAAAG       c.3960
 N  L  L  K  D  K  D  R  L  K  N  L  D  E  Q  L  S  A  P  K         p.1320

          .         .         .         .       | 30 .         .    g.89409
 AAAGATGTCAAGCAGCCAGAAGAACTCCCTCCCATCACAACCACAA | CAACTTCTACTACA    c.4020
 K  D  V  K  Q  P  E  E  L  P  P  I  T  T  T  T |   T  S  T  T      p.1340

          .         .         .         .         .         .       g.89469
 CCAGCTACCAACACCACTTGTACAGCCACGGTTCCACCACAGCCACAGTACAGCTACCAC       c.4080
 P  A  T  N  T  T  C  T  A  T  V  P  P  Q  P  Q  Y  S  Y  H         p.1360

          .         .         .         .         .        | 31.    g.90986
 GACATCAATGTCTATTCCCTTGCGGGCTTGGCACCACACATTACTCTGAATCCAACA | ATT    c.4140
 D  I  N  V  Y  S  L  A  G  L  A  P  H  I  T  L  N  P  T   | I      p.1380

          .         .         .         .         .         .       g.91046
 CCCTTGTTTCAGGCCCATCCACAGTTGAAGCAGTGTGTGCGTCAGGCAATTGAACGGGCT       c.4200
 P  L  F  Q  A  H  P  Q  L  K  Q  C  V  R  Q  A  I  E  R  A         p.1400

          .         .         .         .         .         .       g.91106
 GTCCAGGAGCTGGTCCATCCTGTGGTGGATCGATCAATTAAGATTGCCATGACTACTTGT       c.4260
 V  Q  E  L  V  H  P  V  V  D  R  S  I  K  I  A  M  T  T  C         p.1420

          .         .         .         .         .         .       g.91166
 GAGCAAATAGTCAGGAAGGATTTTGCCCTGGATTCGGAGGAATCTCGAATGCGAATAGCA       c.4320
 E  Q  I  V  R  K  D  F  A  L  D  S  E  E  S  R  M  R  I  A         p.1440

          .         .         .         .         .         .       g.91226
 GCTCATCACATGATGCGTAACTTGACAGCTGGAATGGCTATGATTACATGCAGGGAACCT       c.4380
 A  H  H  M  M  R  N  L  T  A  G  M  A  M  I  T  C  R  E  P         p.1460

          .         .         .         .         .     | 32   .    g.92324
 TTGCTCATGAGCATATCTACCAACTTAAAAAACAGTTTTGCCTCAGCCCTTCGT | ACTGCT    c.4440
 L  L  M  S  I  S  T  N  L  K  N  S  F  A  S  A  L  R   | T  A      p.1480

          .         .         .         .         .         .       g.92384
 TCCCCACAACAAAGAGAAATGATGGATCAGGCAGCTGCTCAATTAGCTCAGGACAATTGT       c.4500
 S  P  Q  Q  R  E  M  M  D  Q  A  A  A  Q  L  A  Q  D  N  C         p.1500

          .         .         .         .         .         .       g.92444
 GAGTTGGCTTGCTGTTTTATTCAGAAGACTGCAGTAGAAAAAGCAGGCCCTGAGATGGAC       c.4560
 E  L  A  C  C  F  I  Q  K  T  A  V  E  K  A  G  P  E  M  D         p.1520

          .      | 33  .         .         .         .         .    g.92596
 AAGAGATTAGCAACT | GAATTTGAGCTGAGAAAACATGCTAGGCAAGAAGGACGCAGATAC    c.4620
 K  R  L  A  T   | E  F  E  L  R  K  H  A  R  Q  E  G  R  R  Y      p.1540

          .         .         .         .         .         .       g.92656
 TGTGATCCTGTTGTTTTAACATATCAAGCTGAACGGATGCCAGAGCAAATCAGGCTGAAA       c.4680
 C  D  P  V  V  L  T  Y  Q  A  E  R  M  P  E  Q  I  R  L  K         p.1560

  | 34       .         .         .         .         .         .    g.93326
  | GTTGGTGGTGTGGACCCAAAGCAGTTGGCTGTTTACGAAGAGTTTGCACGCAATGTTCCT    c.4740
  | V  G  G  V  D  P  K  Q  L  A  V  Y  E  E  F  A  R  N  V  P      p.1580

          .         .         .         .         .         .       g.93386
 GGCTTCTTACCTACAAATGACTTAAGTCAGCCCACGGGATTTTTAGCCCAGCCCATGAAG       c.4800
 G  F  L  P  T  N  D  L  S  Q  P  T  G  F  L  A  Q  P  M  K         p.1600

  | 35       .         .         .         .         .         .    g.94987
  | CAAGCTTGGGCAACAGATGATGTAGCTCAGATTTATGATAAGTGTATTACAGAACTGGAG    c.4860
  | Q  A  W  A  T  D  D  V  A  Q  I  Y  D  K  C  I  T  E  L  E      p.1620

          .         .         .         .         .         .       g.95047
 CAACATCTACATGCCATCCCACCAACTTTGGCCATGAACCCTCAAGCTCAGGCTCTTCGA       c.4920
 Q  H  L  H  A  I  P  P  T  L  A  M  N  P  Q  A  Q  A  L  R         p.1640

          .         .         .         .         .         .       g.95107
 AGTCTCTTGGAGGTTGTAGTTTTATCTCGAAACTCTCGGGATGCCATAGCTGCTCTTGGA       c.4980
 S  L  L  E  V  V  V  L  S  R  N  S  R  D  A  I  A  A  L  G         p.1660

          .   | 36     .         .         .         .         .    g.96020
 TTGCTCCAAAAG | GCTGTAGAGGGCTTACTAGATGCCACAAGTGGTGCTGATGCTGACCTT    c.5040
 L  L  Q  K   | A  V  E  G  L  L  D  A  T  S  G  A  D  A  D  L      p.1680

          .         .         .         .         .         .       g.96080
 CTGCTGCGCTACAGGGAATGCCACCTCTTGGTCCTAAAAGCTCTGCAGGATGGCCGGGCA       c.5100
 L  L  R  Y  R  E  C  H  L  L  V  L  K  A  L  Q  D  G  R  A         p.1700

          .         .         .      | 37  .         .         .    g.96645
 TATGGGTCTCCATGGTGCAACAAACAGATCACAAG | GTGCCTAATTGAATGTCGAGATGAA    c.5160
 Y  G  S  P  W  C  N  K  Q  I  T  R  |  C  L  I  E  C  R  D  E      p.1720

          .         .         .         .         .         .       g.96705
 TATAAATATAATGTGGAGGCTGTGGAGCTGCTAATTCGCAATCATTTGGTTAATATGCAG       c.5220
 Y  K  Y  N  V  E  A  V  E  L  L  I  R  N  H  L  V  N  M  Q         p.1740

          .         .     | 38   .         .         .         .    g.96862
 CAGTATGATCTTCACCTAGCGCAG | TCAATGGAGAATGGCTTAAACTACATGGCTGTGGCA    c.5280
 Q  Y  D  L  H  L  A  Q   | S  M  E  N  G  L  N  Y  M  A  V  A      p.1760

          .         .         .         .         .         .       g.96922
 TTTGCTATGCAGTTAGTAAAAATCCTGCTGGTGGATGAAAGGAGTGTTGCTCATGTTACT       c.5340
 F  A  M  Q  L  V  K  I  L  L  V  D  E  R  S  V  A  H  V  T         p.1780

          .         .         .         .         .         .       g.96982
 GAGGCAGATCTGTTCCACACCATTGAAACCCTCATGAGGATTAATGCTCATTCCAGAGGC       c.5400
 E  A  D  L  F  H  T  I  E  T  L  M  R  I  N  A  H  S  R  G         p.1800

          .     | 39   .         .         .         .         .    g.97712
 AATGCTCCAGAAGG | ATTGCCCCAGCTGATGGAAGTAGTGCGATCCAACTATGAAGCAATG    c.5460
 N  A  P  E  G  |  L  P  Q  L  M  E  V  V  R  S  N  Y  E  A  M      p.1820

          .         .         .         .         .         .       g.97772
 ATTGATCGTGCTCATGGAGGCCCAAACTTTATGATGCATTCTGGGATCTCTCAAGCCTCA       c.5520
 I  D  R  A  H  G  G  P  N  F  M  M  H  S  G  I  S  Q  A  S         p.1840

          .         .         .         .         .         .       g.97832
 GAGTATGATGACCCTCCAGGCCTGAGGGAGAAGGCAGAGTATCTTCTGAGGGAATGGGTG       c.5580
 E  Y  D  D  P  P  G  L  R  E  K  A  E  Y  L  L  R  E  W  V         p.1860

          .         .         .         .         .         .       g.97892
 AATCTCTACCATTCAGCAGCAGCTGGCCGCGACAGTACCAAAGCTTTCTCTGCATTTGTT       c.5640
 N  L  Y  H  S  A  A  A  G  R  D  S  T  K  A  F  S  A  F  V         p.1880

        | 40 .         .         .         .         .         .    g.100545
 GGACAG | ATGCACCAGCAAGGAATACTGAAGACCGATGATCTCATAACAAGGTTCTTTCGT    c.5700
 G  Q   | M  H  Q  Q  G  I  L  K  T  D  D  L  I  T  R  F  F  R      p.1900

          .         .         .         .         .         .       g.100605
 CTGTGTACTGAAATGTGTGTTGAAATCAGTTACCGTGCTCAGGCTGAGCAGCAGCACAAT       c.5760
 L  C  T  E  M  C  V  E  I  S  Y  R  A  Q  A  E  Q  Q  H  N         p.1920

          .         .         .         .         .         .       g.100665
 CCTGCTGCCAATCCCACCATGATCCGAGCCAAGTGCTATCACAACCTGGATGCCTTTGTT       c.5820
 P  A  A  N  P  T  M  I  R  A  K  C  Y  H  N  L  D  A  F  V         p.1940

          .         .         .         .         .         .       g.100725
 CGACTCATTGCACTGCTCGTGAAACACTCAGGGGAGGCCACCAACACTGTCACAAAGATT       c.5880
 R  L  I  A  L  L  V  K  H  S  G  E  A  T  N  T  V  T  K  I         p.1960

          .      | 41  .         .         .         .         .    g.102536
 AATCTGCTGAACAAG | GTCCTTGGTATAGTAGTGGGAGTTCTCCTTCAGGATCATGATGTT    c.5940
 N  L  L  N  K   | V  L  G  I  V  V  G  V  L  L  Q  D  H  D  V      p.1980

          .         .         .         .         .         .       g.102596
 CGTCAGAGTGAATTTCAGCAACTTCCCTACCATCGAATTTTTATCATGCTTCTCTTGGAA       c.6000
 R  Q  S  E  F  Q  Q  L  P  Y  H  R  I  F  I  M  L  L  L  E         p.2000

          .         .         .         .         .          | 42    g.102812
 CTCAATGCACCTGAGCATGTGTTGGAAACCATTAATTTCCAGACACTTACAGCTTTCTG | C    c.6060
 L  N  A  P  E  H  V  L  E  T  I  N  F  Q  T  L  T  A  F  C  |      p.2020

          .         .         .         .         .         .       g.102872
 AATACATTCCACATCTTGAGGCCTACCAAAGCTCCTGGCTTTGTATATGCCTGGCTTGAA       c.6120
 N  T  F  H  I  L  R  P  T  K  A  P  G  F  V  Y  A  W  L  E         p.2040

          .         .         .         .         .        | 43.    g.104542
 CTGATTTCCCATCGGATATTTATTGCAAGAATGCTGGCACATACGCCACAGCAGAAG | GGG    c.6180
 L  I  S  H  R  I  F  I  A  R  M  L  A  H  T  P  Q  Q  K   | G      p.2060

          .         .         .         .         .         .       g.104602
 TGGCCTATGTATGCACAGCTACTGATTGATTTATTCAAATATTTAGCGCCTTTCCTTAGA       c.6240
 W  P  M  Y  A  Q  L  L  I  D  L  F  K  Y  L  A  P  F  L  R         p.2080

          .         .         .          | 44        .         .    g.106259
 AATGTGGAACTCACCAAACCTATGCAAATCCTCTACAAG | GGCACTTTAAGAGTGCTGCTG    c.6300
 N  V  E  L  T  K  P  M  Q  I  L  Y  K   | G  T  L  R  V  L  L      p.2100

          .         .         .         .         .         .       g.106319
 GTTCTTTTGCATGATTTCCCAGAGTTCCTTTGTGATTACCATTATGGGTTCTGTGATGTG       c.6360
 V  L  L  H  D  F  P  E  F  L  C  D  Y  H  Y  G  F  C  D  V         p.2120

          .         .         .         .         .         .       g.106379
 ATCCCACCTAATTGTATCCAGTTAAGAAATTTGATCCTGAGTGCCTTTCCAAGAAACATG       c.6420
 I  P  P  N  C  I  Q  L  R  N  L  I  L  S  A  F  P  R  N  M         p.2140

          .         .         .    | 45    .         .         .    g.108775
 AGGCTCCCCGACCCATTCACTCCTAATCTAAAG | GTGGACATGTTGAGTGAAATTAACATT    c.6480
 R  L  P  D  P  F  T  P  N  L  K   | V  D  M  L  S  E  I  N  I      p.2160

          .         .         .         .         .         .       g.108835
 GCTCCCCGGATTCTCACCAATTTCACTGGAGTAATGCCACCTCAGTTCAAAAAGGATTTG       c.6540
 A  P  R  I  L  T  N  F  T  G  V  M  P  P  Q  F  K  K  D  L         p.2180

          .         .         .         .         .         .       g.108895
 GATTCCTATCTTAAAACTCGATCACCAGTCACTTTCCTGTCTGATCTGCGCAGCAACCTA       c.6600
 D  S  Y  L  K  T  R  S  P  V  T  F  L  S  D  L  R  S  N  L         p.2200

     | 46    .         .         .         .         .         .    g.109584
 CAG | GTATCCAATGAACCTGGGAATCGCTACAACCTCCAGCTCATCAATGCACTGGTGCTC    c.6660
 Q   | V  S  N  E  P  G  N  R  Y  N  L  Q  L  I  N  A  L  V  L      p.2220

          .         .         .         .         .         .       g.109644
 TATGTCGGGACTCAGGCCATTGCGCACATCCACAACAAGGGCAGCACACCTTCAATGAGC       c.6720
 Y  V  G  T  Q  A  I  A  H  I  H  N  K  G  S  T  P  S  M  S         p.2240

          .         .         .         .         .         .       g.109704
 ACCATCACTCACTCAGCACACATGGATATCTTCCAGAATTTGGCTGTGGACTTGGACACT       c.6780
 T  I  T  H  S  A  H  M  D  I  F  Q  N  L  A  V  D  L  D  T         p.2260

      | 47   .         .         .         .         .         .    g.111440
 GAGG | GTCGCTATCTCTTTTTGAATGCAATTGCAAATCAGCTCCGGTACCCAAATAGCCAC    c.6840
 E  G |   R  Y  L  F  L  N  A  I  A  N  Q  L  R  Y  P  N  S  H      p.2280

          .         .         .         .         .         .       g.111500
 ACTCACTACTTCAGTTGCACCATGCTGTACCTTTTTGCAGAGGCCAATACGGAAGCCATC       c.6900
 T  H  Y  F  S  C  T  M  L  Y  L  F  A  E  A  N  T  E  A  I         p.2300

          .        | 48.         .         .         .         .    g.113612
 CAAGAACAGATCACAAG | AGTTCTCTTGGAACGGTTGATTGTAAATAGGCCACATCCTTGG    c.6960
 Q  E  Q  I  T  R  |  V  L  L  E  R  L  I  V  N  R  P  H  P  W      p.2320

          .         .         .         .         .         .       g.113672
 GGTCTTCTTATTACCTTCATTGAGCTGATTAAAAACCCAGCGTTTAAGTTCTGGAACCAT       c.7020
 G  L  L  I  T  F  I  E  L  I  K  N  P  A  F  K  F  W  N  H         p.2340

          .         .         .   | 49     .         .         .    g.113878
 GAATTTGTACACTGTGCCCCAGAAATCGAAAA | GTTATTCCAGTCGGTCGCACAGTGCTGC    c.7080
 E  F  V  H  C  A  P  E  I  E  K  |  L  F  Q  S  V  A  Q  C  C      p.2360

          .         .         .         .         .                 g.113929
 ATGGGACAGAAGCAGGCCCAGCAAGTAATGGAAGGGACAGGTGCCAGTTAG                c.7131
 M  G  Q  K  Q  A  Q  Q  V  M  E  G  T  G  A  S  X                  p.2376

          .         .         .         .         .         .       g.113989
 acgaaactgcatctctgttgtacgtgtcagtctagaggtctcactgcaccgagttcataa       c.*60

          .         .         .         .         .         .       g.114049
 actgactgaagaatcctttcagctcttcctgactttcccagccctttggtttgtgggtat       c.*120

          .         .         .         .         .         .       g.114109
 ctgccccaactactgttgggatcagcctcctgtcttatgtgggcacgttccaaagtttaa       c.*180

          .         .         .         .         .         .       g.114169
 atgcatttttttgactcttggccaaaatttagaagatgctgtgaatatcattttgaactt       c.*240

          .         .         .         .         .         .       g.114229
 gtgtaaatacatgaaagagaaaacctttgtctggaacttcttggctttgtgcaagctgtg       c.*300

          .         .         .         .         .         .       g.114289
 tccaaggcaagtacataaactggtaccttgtaatgaagaggcagctgatgccatgcactt       c.*360

          .         .         .         .         .         .       g.114349
 gtctgagggcatagctccatgtcttctgacattcctggtgtcccaaagaatagcaaaaag       c.*420

          .         .         .         .         .         .       g.114409
 ccagtttgaatattatgtaacttatttttttaatgtggacaggggaccttgaaaatcact       c.*480

          .         .         .         .         .         .       g.114469
 aagttattaaaaatgtggatgtgctagaattggatatgtccaggaacatgggaagggctc       c.*540

          .         .         .         .         .         .       g.114529
 actattggaatcccatgagtttccattttgtctctacccaaacgtattccaaagctgact       c.*600

          .         .         .         .         .         .       g.114589
 gcatttgtaccatcttatttcttttggggattatacacctcagccgcctgagatgggggt       c.*660

          .         .         .         .         .         .       g.114649
 cagctctttatataaagggaaaccagaccaggcctaaagcccacccctaccctcaccccc       c.*720

          .         .         .         .         .         .       g.114709
 ccaatcctctcctgaaacttaaaaacagtgggaatataggaaagggaaccaaatctcatt       c.*780

          .         .         .         .         .         .       g.114769
 aattaattgttctcccccattaccccactgaatgaatggccatacaggctaagctgaata       c.*840

          .         .         .         .         .         .       g.114829
 atgacaaagttgaaaggaccaatacagccccttttataaggattttgaatgttttgcaaa       c.*900

          .         .         .         .         .         .       g.114889
 tgtattggtccctgtgttgtattttgtagccttttcctgggcttcagctcccctacttct       c.*960

          .         .         .         .         .                 g.114941
 tgtatgtgtatgcatactgtagctaaccattaaagtcatgacacacacatga               c.*1012

 (downstream sequence)
Legend:
Nucleotide numbering (following the rules of the HGVS for a 'Coding DNA Reference Sequence') is indicated at the right of the sequence, counting the A of the ATG translation initiating Methionine as 1. Every 10th nucleotide is indicated by a "." above the sequence. The CCR4-NOT transcription complex, subunit 1 protein sequence is shown below the coding DNA sequence, with numbering indicated at the right starting with 1 for the translation initiating Methionine. Every 10th amino acid is shown in bold. The position of introns is indicated by a vertical line, splitting the two exons. The start of the first exon (transcription initiation site) is indicated by a '\', the end of the last exon (poly-A addition site) by a '/'. The exon number is indicated above the first nucleotide(s) of the exon. To aid the description of frame shift variants, all stop codons in the +1 frame are shown in bold while all stop codons in the +2 frame are underlined.

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