contactin associated protein-like 2 (CNTNAP2) - coding DNA reference sequence

(used for variant description)

(last modified January 13, 2018)


This file was created to facilitate the description of sequence variants on transcript NM_014141.5 in the CNTNAP2 gene based on a coding DNA reference sequence following the HGVS recommendations.

The sequence was taken from NG_007092.2, covering CNTNAP2 transcript NM_014141.5.


Please note that introns are available by clicking on the exon numbers above the sequence.
 (upstream sequence)
                               .         .         .                g.5036
                         acaagctctccatgtgagctgacaggcgagtggaaa       c.-481

 .         .         .         .         .         .                g.5096
 cccctcgagtcacgctgcccggcggcggagggagcgctcgcccgcagtggcaacagctgc       c.-421

 .         .         .         .         .         .                g.5156
 accaccgtccccgtcgctctgccttcctcttctgcagcctctgctcttctgattacctcc       c.-361

 .         .         .         .         .         .                g.5216
 ctcccccgtcctttggtgatttttttttttcaagaaggagagggcggggtaggtgtccgt       c.-301

 .         .         .         .         .         .                g.5276
 tccctcccctcttccccctcctttgccttcttggtttgaatttcctcccccggcgttgca       c.-241

 .         .         .         .         .         .                g.5336
 ctggcacacagtgcaagaggcaatacccgcacggagggagaacgaaggctgagactcccc       c.-181

 .         .         .         .         .         .                g.5396
 tgccgctccaagcccggaagaactggagcctggaggggggtgaggggagaagaggaagcg       c.-121

 .         .         .         .         .         .                g.5456
 ggaggggcttggcttcctcgcgtatttgaggacagcccatctcccttcaagaaccctacg       c.-61

 .         .         .         .         .         .                g.5516
 gagagtcggactgcatctccgcagcgagctcttggagcgccgccggccgggaggcgaagg       c.-1

          .         .         .         .         .         .       g.5576
 ATGCAGGCGGCTCCGCGCGCCGGCTGCGGGGCAGCGCTCCTGCTGTGGATTGTCAGCAGC       c.60
 M  Q  A  A  P  R  A  G  C  G  A  A  L  L  L  W  I  V  S  S         p.20

          .         .         .        | 02.         .         .    g.662933
 TGCCTCTGCAGAGCCTGGACGGCTCCCTCCACGTCCC | AAAAATGTGATGAGCCACTTGTC    c.120
 C  L  C  R  A  W  T  A  P  S  T  S  Q |   K  C  D  E  P  L  V      p.40

          .         .         .         .         .         .       g.662993
 TCTGGACTCCCCCATGTGGCTTTCAGCAGCTCCTCCTCCATCTCTGGTAGCTATTCTCCC       c.180
 S  G  L  P  H  V  A  F  S  S  S  S  S  I  S  G  S  Y  S  P         p.60

          .         .         | 03         .         .         .    g.728382
 GGCTATGCCAAGATAAACAAGAGAGGAG | GTGCTGGGGGATGGTCTCCATCAGACAGCGAC    c.240
 G  Y  A  K  I  N  K  R  G  G |   A  G  G  W  S  P  S  D  S  D      p.80

          .         .         .         .         .         .       g.728442
 CATTATCAATGGCTTCAGGTTGACTTTGGCAATCGGAAGCAGATCAGTGCCATTGCAACC       c.300
 H  Y  Q  W  L  Q  V  D  F  G  N  R  K  Q  I  S  A  I  A  T         p.100

          .         .         .         .         .         .       g.728502
 CAAGGAAGGTATAGCAGCTCAGATTGGGTGACCCAATACCGGATGCTCTACAGCGACACA       c.360
 Q  G  R  Y  S  S  S  D  W  V  T  Q  Y  R  M  L  Y  S  D  T         p.120

          .         .         .         .   | 04     .         .    g.932564
 GGGAGAAACTGGAAACCCTATCATCAAGATGGGAATATCTGG | GCATTTCCCGGAAACATT    c.420
 G  R  N  W  K  P  Y  H  Q  D  G  N  I  W   | A  F  P  G  N  I      p.140

          .         .         .         .         .         .       g.932624
 AACTCTGACGGTGTGGTCCGGCACGAATTACAGCATCCGATTATTGCCCGCTATGTGCGC       c.480
 N  S  D  G  V  V  R  H  E  L  Q  H  P  I  I  A  R  Y  V  R         p.160

          .         .         .         .         .         .       g.932684
 ATAGTGCCTCTGGATTGGAATGGAGAAGGTCGCATTGGACTCAGAATTGAAGTTTATGGC       c.540
 I  V  P  L  D  W  N  G  E  G  R  I  G  L  R  I  E  V  Y  G         p.180

          . | 05       .         .         .         .         .    g.996836
 TGTTCTTACT | GGGCTGATGTTATCAACTTTGATGGCCATGTTGTATTACCATATAGATTC    c.600
 C  S  Y  W |   A  D  V  I  N  F  D  G  H  V  V  L  P  Y  R  F      p.200

          .         .         .         .         .         .       g.996896
 AGAAACAAGAAGATGAAAACACTGAAAGATGTCATTGCCTTGAACTTTAAGACGTCTGAA       c.660
 R  N  K  K  M  K  T  L  K  D  V  I  A  L  N  F  K  T  S  E         p.220

          .         .         .         .         .         .       g.996956
 AGTGAAGGAGTAATCCTGCACGGAGAAGGACAGCAAGGAGATTACATTACCTTGGAACTG       c.720
 S  E  G  V  I  L  H  G  E  G  Q  Q  G  D  Y  I  T  L  E  L         p.240

          .         .         .     | 06   .         .         .    g.1009644
 AAAAAAGCCAAGCTGGTCCTCAGTTTAAACTTAG | GAAGCAACCAGCTTGGCCCCATATAT    c.780
 K  K  A  K  L  V  L  S  L  N  L  G |   S  N  Q  L  G  P  I  Y      p.260

          .         .         .         .         .         .       g.1009704
 GGCCACACATCAGTGATGACAGGAAGTTTGCTGGATGACCACCACTGGCACTCTGTGGTC       c.840
 G  H  T  S  V  M  T  G  S  L  L  D  D  H  H  W  H  S  V  V         p.280

          .         .         .         .         .         .       g.1009764
 ATTGAGCGCCAGGGGCGGAGCATTAACCTCACTCTGGACAGGAGCATGCAGCACTTCCGT       c.900
 I  E  R  Q  G  R  S  I  N  L  T  L  D  R  S  M  Q  H  F  R         p.300

          .         .         .          | 07        .         .    g.1017353
 ACCAATGGAGAGTTTGACTACCTGGACTTGGACTATGAG | ATAACCTTTGGAGGCATCCCT    c.960
 T  N  G  E  F  D  Y  L  D  L  D  Y  E   | I  T  F  G  G  I  P      p.320

          .         .         .         .         .         .       g.1017413
 TTCTCTGGCAAGCCCAGCTCCAGCAGTAGAAAGAATTTCAAAGGCTGCATGGAAAGCATC       c.1020
 F  S  G  K  P  S  S  S  S  R  K  N  F  K  G  C  M  E  S  I         p.340

          .         .         .         .         .         .       g.1017473
 AACTACAATGGCGTCAACATTACTGATCTTGCCAGAAGGAAGAAATTAGAGCCCTCAAAT       c.1080
 N  Y  N  G  V  N  I  T  D  L  A  R  R  K  K  L  E  P  S  N         p.360

     | 08    .         .         .         .         .         .    g.1020941
 GTG | GGAAATTTGAGCTTTTCTTGTGTGGAACCCTATACGGTGCCTGTCTTTTTCAACGCT    c.1140
 V   | G  N  L  S  F  S  C  V  E  P  Y  T  V  P  V  F  F  N  A      p.380

          .         .         .         .         .         .       g.1021001
 ACAAGTTACCTGGAGGTGCCCGGACGGCTTAACCAGGACCTGTTCTCAGTCAGTTTCCAG       c.1200
 T  S  Y  L  E  V  P  G  R  L  N  Q  D  L  F  S  V  S  F  Q         p.400

          .         .         .         .         .         .       g.1021061
 TTTAGGACATGGAACCCCAATGGTCTCCTGGTCTTCAGTCACTTTGCGGATAATTTGGGC       c.1260
 F  R  T  W  N  P  N  G  L  L  V  F  S  H  F  A  D  N  L  G         p.420

          .         .         .         .         .         .       g.1021121
 AATGTGGAGATTGACCTCACTGAAAGCAAAGTGGGTGTTCACATCAACATCACACAGACC       c.1320
 N  V  E  I  D  L  T  E  S  K  V  G  V  H  I  N  I  T  Q  T         p.440

          .         .         | 09         .         .         .    g.1188812
 AAGATGAGCCAAATCGATATTTCCTCAG | GTTCTGGGTTGAATGATGGACAGTGGCACGAG    c.1380
 K  M  S  Q  I  D  I  S  S  G |   S  G  L  N  D  G  Q  W  H  E      p.460

          .         .         .         .         .         .       g.1188872
 GTTCGCTTCCTAGCCAAGGAAAATTTTGCTATTCTCACCATCGATGGAGATGAAGCATCA       c.1440
 V  R  F  L  A  K  E  N  F  A  I  L  T  I  D  G  D  E  A  S         p.480

          .         .         .         .         .         | 10    g.1284250
 GCAGTTCGAACTAATAGTCCCCTTCAAGTTAAAACTGGCGAGAAGTACTTTTTTGGAG | GT    c.1500
 A  V  R  T  N  S  P  L  Q  V  K  T  G  E  K  Y  F  F  G  G |       p.500

          .         .         .         .         .         .       g.1284310
 TTTCTGAACCAGATGAATAACTCAAGTCACTCTGTCCTTCAGCCTTCATTCCAAGGATGC       c.1560
 F  L  N  Q  M  N  N  S  S  H  S  V  L  Q  P  S  F  Q  G  C         p.520

          .         .         .         .         .         .       g.1284370
 ATGCAGCTCATTCAAGTGGACGATCAACTTGTAAATTTATACGAAGTGGCACAAAGGAAG       c.1620
 M  Q  L  I  Q  V  D  D  Q  L  V  N  L  Y  E  V  A  Q  R  K         p.540

          .         .         .         .         . | 11       .    g.1374584
 CCGGGAAGTTTCGCGAATGTCAGCATTGACATGTGTGCGATCATAGACAG | ATGTGTGCCC    c.1680
 P  G  S  F  A  N  V  S  I  D  M  C  A  I  I  D  R  |  C  V  P      p.560

          .         .         .         .         .         .       g.1374644
 AATCACTGTGAGCATGGTGGAAAGTGCTCGCAAACATGGGACAGCTTCAAATGCACTTGT       c.1740
 N  H  C  E  H  G  G  K  C  S  Q  T  W  D  S  F  K  C  T  C         p.580

          .         .         .        | 12.         .         .    g.1450800
 GATGAGACAGGATACAGTGGGGCCACCTGCCACAACT | CTATCTACGAGCCTTCCTGTGAA    c.1800
 D  E  T  G  Y  S  G  A  T  C  H  N  S |   I  Y  E  P  S  C  E      p.600

          .         .         .         .         .         .       g.1450860
 GCCTACAAACACCTAGGACAGACATCAAATTATTACTGGATAGATCCTGATGGCAGCGGA       c.1860
 A  Y  K  H  L  G  Q  T  S  N  Y  Y  W  I  D  P  D  G  S  G         p.620

          .         .         .        | 13.         .         .    g.1527768
 CCTCTGGGGCCTCTGAAAGTTTACTGCAACATGACAG | AGGACAAAGTGTGGACCATAGTG    c.1920
 P  L  G  P  L  K  V  Y  C  N  M  T  E |   D  K  V  W  T  I  V      p.640

          .         .         .         .         .         .       g.1527828
 TCTCATGACTTGCAGATGCAGACGCCTGTGGTCGGCTACAACCCAGAAAAATACTCAGTG       c.1980
 S  H  D  L  Q  M  Q  T  P  V  V  G  Y  N  P  E  K  Y  S  V         p.660

          .         .         .         .         .         .       g.1527888
 ACACAGCTCGTTTACAGCGCCTCCATGGACCAGATAAGTGCCATCACTGACAGTGCCGAG       c.2040
 T  Q  L  V  Y  S  A  S  M  D  Q  I  S  A  I  T  D  S  A  E         p.680

          .         .         .         .         .         | 14    g.1792206
 TACTGCGAGCAGTATGTCTCCTATTTCTGCAAGATGTCAAGATTGTTGAACACCCCAG | AT    c.2100
 Y  C  E  Q  Y  V  S  Y  F  C  K  M  S  R  L  L  N  T  P  D |       p.700

          .         .         .         .         .         .       g.1792266
 GGAAGCCCTTACACTTGGTGGGTTGGCAAAGCCAACGAGAAGCACTACTACTGGGGAGGC       c.2160
 G  S  P  Y  T  W  W  V  G  K  A  N  E  K  H  Y  Y  W  G  G         p.720

          .         .         .         .         .         .       g.1792326
 TCTGGGCCTGGAATCCAGAAATGTGCCTGCGGCATCGAACGCAACTGCACAGATCCCAAG       c.2220
 S  G  P  G  I  Q  K  C  A  C  G  I  E  R  N  C  T  D  P  K         p.740

          .         .         .      | 15  .         .         .    g.1866526
 TACTACTGTAACTGCGACGCGGACTACAAGCAATG | GAGGAAGGATGCTGGTTTCTTATCA    c.2280
 Y  Y  C  N  C  D  A  D  Y  K  Q  W  |  R  K  D  A  G  F  L  S      p.760

          .         .         .         .         .         .       g.1866586
 TACAAAGATCACCTGCCAGTGAGCCAAGTGGTGGTTGGAGATACTGACCGTCAAGGCTCA       c.2340
 Y  K  D  H  L  P  V  S  Q  V  V  V  G  D  T  D  R  Q  G  S         p.780

          .         .         .         .    | 16    .         .    g.2006774
 GAAGCCAAATTGAGCGTAGGTCCTCTGCGCTGCCAAGGAGACA | GGAATTATTGGAATGCC    c.2400
 E  A  K  L  S  V  G  P  L  R  C  Q  G  D  R |   N  Y  W  N  A      p.800

          .         .         .         .         .         .       g.2006834
 GCCTCTTTCCCAAACCCATCCTCCTACCTGCACTTCTCTACTTTCCAAGGGGAAACTAGC       c.2460
 A  S  F  P  N  P  S  S  Y  L  H  F  S  T  F  Q  G  E  T  S         p.820

          .         .         .         .         .         .       g.2006894
 GCTGACATTTCTTTCTACTTCAAAACATTAACCCCCTGGGGAGTGTTTCTTGAAAATATG       c.2520
 A  D  I  S  F  Y  F  K  T  L  T  P  W  G  V  F  L  E  N  M         p.840

          .         .         .     | 17   .         .         .    g.2036156
 GGAAAGGAAGATTTCATCAAGCTGGAGCTGAAGT | CTGCCACAGAAGTGTCCTTTTCATTT    c.2580
 G  K  E  D  F  I  K  L  E  L  K  S |   A  T  E  V  S  F  S  F      p.860

          .         .         .         .         .         .       g.2036216
 GATGTGGGAAATGGGCCAGTAGAGATTGTAGTGAGGTCACCAACCCCTCTCAACGATGAC       c.2640
 D  V  G  N  G  P  V  E  I  V  V  R  S  P  T  P  L  N  D  D         p.880

          .         .         .         .         .         .       g.2036276
 CAGTGGCACCGGGTCACTGCAGAGAGGAATGTCAAGCAGGCCAGCCTACAGGTGGACCGG       c.2700
 Q  W  H  R  V  T  A  E  R  N  V  K  Q  A  S  L  Q  V  D  R         p.900

          .         .         .         .         .         .       g.2036336
 CTACCGCAGCAGATCCGCAAGGCCCCAACAGAAGGCCACACCCGCCTGGAGCTCTACAGC       c.2760
 L  P  Q  Q  I  R  K  A  P  T  E  G  H  T  R  L  E  L  Y  S         p.920

          .    | 18    .         .         .         .         .    g.2060928
 CAGTTATTTGTGG | GTGGTGCTGGGGGCCAGCAGGGCTTCCTGGGCTGCATCCGCTCCTTG    c.2820
 Q  L  F  V  G |   G  A  G  G  Q  Q  G  F  L  G  C  I  R  S  L      p.940

          .         .         .         .         .         .       g.2060988
 AGGATGAATGGGGTGACACTTGACCTGGAGGAAAGAGCAAAGGTCACATCTGGGTTCATA       c.2880
 R  M  N  G  V  T  L  D  L  E  E  R  A  K  V  T  S  G  F  I         p.960

          .         .         .         .         .         .       g.2061048
 TCCGGATGCTCGGGCCATTGCACCAGCTATGGAACAAACTGTGAAAATGGAGGCAAATGC       c.2940
 S  G  C  S  G  H  C  T  S  Y  G  T  N  C  E  N  G  G  K  C         p.980

          .         .         .         .         .         .       g.2061108
 CTAGAGAGATACCACGGTTACTCCTGCGATTGCTCTAATACTGCATATGATGGAACATTT       c.3000
 L  E  R  Y  H  G  Y  S  C  D  C  S  N  T  A  Y  D  G  T  F         p.1000

          . | 19       .         .         .         .         .    g.2105977
 TGCAACAAAG | ATGTTGGTGCATTTTTTGAAGAAGGGATGTGGCTACGATATAACTTTCAG    c.3060
 C  N  K  D |   V  G  A  F  F  E  E  G  M  W  L  R  Y  N  F  Q      p.1020

          .         .         .         .         .         .       g.2106037
 GCACCAGCAACAAATGCCAGAGACTCCAGCAGCAGAGTAGACAACGCTCCCGACCAGCAG       c.3120
 A  P  A  T  N  A  R  D  S  S  S  R  V  D  N  A  P  D  Q  Q         p.1040

          .         .         .         .         .         .       g.2106097
 AACTCCCACCCGGACCTGGCACAGGAGGAGATCCGCTTCAGCTTCAGCACCACCAAGGCG       c.3180
 N  S  H  P  D  L  A  Q  E  E  I  R  F  S  F  S  T  T  K  A         p.1060

          .         .         .         .         .         .       g.2106157
 CCCTGCATTCTCCTCTACATCAGCTCCTTCACCACAGACTTCTTGGCAGTCCTCGTCAAA       c.3240
 P  C  I  L  L  Y  I  S  S  F  T  T  D  F  L  A  V  L  V  K         p.1080

         | 20.         .         .         .         .         .    g.2118338
 CCCACTG | GAAGCTTACAGATTCGATACAACCTGGGTGGCACCCGAGAGCCATACAATATT    c.3300
 P  T  G |   S  L  Q  I  R  Y  N  L  G  G  T  R  E  P  Y  N  I      p.1100

          .         .         .         .         .         .       g.2118398
 GACGTAGACCACAGGAACATGGCCAATGGACAGCCCCACAGTGTCAACATCACCCGCCAC       c.3360
 D  V  D  H  R  N  M  A  N  G  Q  P  H  S  V  N  I  T  R  H         p.1120

          .         .  | 21      .         .         .         .    g.2155711
 GAGAAGACCATCTTTCTCAAG | CTCGATCATTATCCTTCTGTGAGTTACCATCTGCCAAGT    c.3420
 E  K  T  I  F  L  K   | L  D  H  Y  P  S  V  S  Y  H  L  P  S      p.1140

          .         .         .         .         .      | 22  .    g.2272293
 TCATCCGACACCCTCTTCAATTCTCCCAAGTCGCTCTTTCTGGGAAAAGTTATAG | AAACA    c.3480
 S  S  D  T  L  F  N  S  P  K  S  L  F  L  G  K  V  I  E |   T      p.1160

          .         .         .         .         .         .       g.2272353
 GGGAAAATTGACCAAGAGATTCACAAATACAACACCCCAGGATTCACTGGTTGCCTCTCC       c.3540
 G  K  I  D  Q  E  I  H  K  Y  N  T  P  G  F  T  G  C  L  S         p.1180

          .         .         .         .         .         .       g.2272413
 AGAGTCCAGTTCAACCAGATCGCCCCTCTCAAGGCCGCCTTGAGGCAGACAAACGCCTCG       c.3600
 R  V  Q  F  N  Q  I  A  P  L  K  A  A  L  R  Q  T  N  A  S         p.1200

          .         .         .         .         .         .       g.2272473
 GCTCACGTCCACATCCAGGGCGAGCTGGTGGAGTCCAACTGCGGGGCCTCGCCGCTGACC       c.3660
 A  H  V  H  I  Q  G  E  L  V  E  S  N  C  G  A  S  P  L  T         p.1220

          .         .         .         .         .      | 23  .    g.2298035
 CTCTCCCCCATGTCGTCCGCCACCGACCCCTGGCACCTGGATCACCTGGATTCAG | CCAGT    c.3720
 L  S  P  M  S  S  A  T  D  P  W  H  L  D  H  L  D  S  A |   S      p.1240

          .         .         .         .         .         .       g.2298095
 GCGGATTTTCCATATAATCCAGGACAAGGCCAAGCTATAAGAAATGGAGTCAACAGAAAC       c.3780
 A  D  F  P  Y  N  P  G  Q  G  Q  A  I  R  N  G  V  N  R  N         p.1260

          .       | 24 .         .         .         .         .    g.2304100
 TCGGCTATCATTGGAG | GCGTCATTGCTGTGGTGATTTTCACCATCCTGTGCACCCTGGTC    c.3840
 S  A  I  I  G  G |   V  I  A  V  V  I  F  T  I  L  C  T  L  V      p.1280

          .         .         .         .         .         .       g.2304160
 TTCCTGATCCGGTACATGTTCCGCCACAAGGGCACCTACCATACCAACGAAGCAAAGGGG       c.3900
 F  L  I  R  Y  M  F  R  H  K  G  T  Y  H  T  N  E  A  K  G         p.1300

          .         .         .         .         .         .       g.2304220
 GCGGAGTCGGCAGAGAGCGCGGACGCCGCCATCATGAACAACGACCCCAACTTCACAGAG       c.3960
 A  E  S  A  E  S  A  D  A  A  I  M  N  N  D  P  N  F  T  E         p.1320

          .         .         .                                     g.2304256
 ACCATTGATGAAAGCAAAAAGGAATGGCTCATTTGA                               c.3996
 T  I  D  E  S  K  K  E  W  L  I  X                                 p.1331

          .         .         .         .         .         .       g.2304316
 ggggtggctacttggctatgggatagggaggagggaattactagggaggagagaaaggga       c.*60

          .         .         .         .         .         .       g.2304376
 caaaagcaccctgcttcatactcttgagcacatccttaaaatatcagcacaagttggggg       c.*120

          .         .         .         .         .         .       g.2304436
 aggcaggcaatggaatataatggaatattcttgagactgatcacaaaaaaaaaaaccttt       c.*180

          .         .         .         .         .         .       g.2304496
 ttaatatttctttatagctgagttttcccttctgtatcaaaacaaaataatacaaaaaat       c.*240

          .         .         .         .         .         .       g.2304556
 gcttttagagtttaagcaatggttgaaatttgtaggtactatctgtcttattttgtgtgt       c.*300

          .         .         .         .         .         .       g.2304616
 gtttagaggtgttctaaagacccgtggtaacagggcaagttttctacgtttttaagagcc       c.*360

          .         .         .         .         .         .       g.2304676
 cttagaacgtgggtattttttttcttgagaaaagctaatgcacctacagatggcccccaa       c.*420

          .         .         .         .         .         .       g.2304736
 cattctcttccttttgcttctagtcaaccttaatgggctgttacagaaactagttcgtgt       c.*480

          .         .         .         .         .         .       g.2304796
 ttatatactatttcctttgatgtcctataagtcggaaaagaaaggggcaaagagaaccta       c.*540

          .         .         .         .         .         .       g.2304856
 ttatttgccagtttttaagcagagctcaatctatgccagctctctggcatctggggttcc       c.*600

          .         .         .         .         .         .       g.2304916
 tgactgataccagcagttgaaggaagagagtgcatggcacctggtgtgtaacgacacaat       c.*660

          .         .         .         .         .         .       g.2304976
 cagcacaactggagagaggcattaaagaaccagggaaggtagtttgatttttcattgaat       c.*720

          .         .         .         .         .         .       g.2305036
 tctacaagctaatattgttccacgtatgtagtcttagaccaatagctgtaactatcagct       c.*780

          .         .         .         .         .         .       g.2305096
 gcaataccatggtgaccagctgttacaaaagattttttcctgttttatctgaaacatact       c.*840

          .         .         .         .         .         .       g.2305156
 ggatttatatatgtataagcgcctcaatggggaattagagccagatgttatgatttgttt       c.*900

          .         .         .         .         .         .       g.2305216
 gctctttttcttttatagtttagttatagcaaaaatatggataatttctagtgaatgcat       c.*960

          .         .         .         .         .         .       g.2305276
 aaattaggttgcgtttcttattttgctttaaatctctggtagtttttccacccctgtgac       c.*1020

          .         .         .         .         .         .       g.2305336
 acaatcctaatagacagtgtcctgtaaatggacacaacacaataaagtcaagttattatt       c.*1080

          .         .         .         .         .         .       g.2305396
 gctgttactctggatgatatggaaaacactgccatattttaaatcaactactccacgtgt       c.*1140

          .         .         .         .         .         .       g.2305456
 ttttccatccaatcacactgctgtgattcagggatctttcttctaagacggacacatttg       c.*1200

          .         .         .         .         .         .       g.2305516
 aacctcaggttcatcacaaacctggtacctgttgcttcccagaggatggagaagtgtagt       c.*1260

          .         .         .         .         .         .       g.2305576
 taatcacacctcttagtttaatctgaaatcttgacccagttatttaacaaataaatacct       c.*1320

          .         .         .         .         .         .       g.2305636
 cattgattatatttaaaagtaatacacttcctgtaaacaaatggggacaatgcatccaaa       c.*1380

          .         .         .         .         .         .       g.2305696
 aaatctttttaaacagattacacaaaaattatttccagaaaggctaccatttatcatcat       c.*1440

          .         .         .         .         .         .       g.2305756
 tatatttcaagcctcttatacttaataagcactttctaaaaagtcttgagatcccaccat       c.*1500

          .         .         .         .         .         .       g.2305816
 tctgaggaattcaatatgatcactttttccttctttgcctgggagaggttaagaggaggt       c.*1560

          .         .         .         .         .         .       g.2305876
 ttcgaaggtatagatgctattgttctgatggcccggctgaataaaatggaaattctagtt       c.*1620

          .         .         .         .         .         .       g.2305936
 tgttagaattatgcattctttttcaagattctcagtgtgcctaacttattggagcacatc       c.*1680

          .         .         .         .         .         .       g.2305996
 agtttcttgggtaatggaaaacattacctagagttgccagtggcacattacaccagtaca       c.*1740

          .         .         .         .         .         .       g.2306056
 gagcacattccaaaggagacattggaccagttaattcccatacaagtcaaggtaacagaa       c.*1800

          .         .         .         .         .         .       g.2306116
 caaaagggaatcctgatgcccttttaccattgctggttgagctcaggcactgtcatggac       c.*1860

          .         .         .         .         .         .       g.2306176
 acccttaattttaaaaggttttaatcattcttctataaaatacatttaaaatggaaaaat       c.*1920

          .         .         .         .         .         .       g.2306236
 acttaatatcactaaatatcagaacaatgtaacatttacaaatgacatattgaaagcaaa       c.*1980

          .         .         .         .         .         .       g.2306296
 ggctgttttatttagccaagatgattaccattaggagttactttatgtattgttgaaagc       c.*2040

          .         .         .         .         .         .       g.2306356
 aaattttaaacatgatgttttagaagtgtttctgatttttaaacctggtttacaggtatt       c.*2100

          .         .         .         .         .         .       g.2306416
 acttctgcacttaccaaataatgccagatggaaatttattatttcttgcaattcccatga       c.*2160

          .         .         .         .         .         .       g.2306476
 tagctctgttctttatgcattgtctcaacactttcccttttttcccaaaatgagtagaga       c.*2220

          .         .         .         .         .         .       g.2306536
 attaaagccacccaaaacagcttctgctactaaaatgttctcatcctttctcctccctct       c.*2280

          .         .         .         .         .         .       g.2306596
 ccttttcctgccacaaaaggtgaaaaatgagatccaatcctctcaccaaaatttcaaacc       c.*2340

          .         .         .         .         .         .       g.2306656
 taggacactggaatgactgcagggatcagtggttctcccatatcaccatcaattaagaca       c.*2400

          .         .         .         .         .         .       g.2306716
 tataggacactgtcttccttcaagagggttacaatgtggccatcagacaggaaaccaaac       c.*2460

          .         .         .         .         .         .       g.2306776
 ggtggataaagtattaagtaactaagtgccaaataaatgctggaaatcttgacctctcct       c.*2520

          .         .         .         .         .         .       g.2306836
 tgggattatgggtgtaacaaaaatccctacatctgtttatgaaggccatattcagtacat       c.*2580

          .         .         .         .         .         .       g.2306896
 tttaaatggtaaataatctgtttatgtgaagaaaaagaattaagtctttcttccaactct       c.*2640

          .         .         .         .         .         .       g.2306956
 ctccttggatagcctagcacagtgcagcctccataaccatgacattcccgcccaagctct       c.*2700

          .         .         .         .         .         .       g.2307016
 cagtgcctaatcctgctttgtcattcacatctcacaaaatcttgacatcttacattccaa       c.*2760

          .         .         .         .         .         .       g.2307076
 tacattatcaagcaagcacaagtatgctggtagtagcctctttaaataatatgtatagac       c.*2820

          .         .         .         .         .         .       g.2307136
 aacaacaacgacaaaaaatagactgttttaaagtttcagggaaagttggtggctgattta       c.*2880

          .         .         .         .         .         .       g.2307196
 aagttgtgcaggaaacatcttctgtgtatgaagcaaatgtcgatgttttgaaaaaagcta       c.*2940

          .         .         .         .         .         .       g.2307256
 ggagatgactttgaatgaatgcaaggttagtgagatcctaagctctcaaaatagcatatt       c.*3000

          .         .         .         .         .         .       g.2307316
 ccctagagctcaagaaagctggtccaggaggttgaaaaagctattttgttgttaaattat       c.*3060

          .         .         .         .         .         .       g.2307376
 tttctggcccttcttaatatttaaaaatgtatttccccttgtggctttcaaccacctgct       c.*3120

          .         .         .         .         .         .       g.2307436
 caaaaaaagagacttgttacatgaaagttttcattaaagagctgaaaacaagaatttaga       c.*3180

          .         .         .         .         .         .       g.2307496
 gagccattcctagaaaatgtcctactgccctgcatttgacaaacaagcatcctttactaa       c.*3240

          .         .         .         .         .         .       g.2307556
 caagagcaggaattcagaggcacaagaaaaagcattggcatgagccaaagagtctgtctt       c.*3300

          .         .         .         .         .         .       g.2307616
 aatgttacttttgaaaatctgctgagcggccaccatatgcaggctgagagctgggcacag       c.*3360

          .         .         .         .         .         .       g.2307676
 gcgaagccattggaagcacttcaggaacaagcacacagctgtgggacttgaacatgcaag       c.*3420

          .         .         .         .         .         .       g.2307736
 tgttcaggttgtgtcaagaagcttttctttccttctatgatggaatctgttcttttctat       c.*3480

          .         .         .         .         .         .       g.2307796
 cctacttttttctctcttcctctcctcaccacattataccctgctcttacgcagtaaacg       c.*3540

          .         .         .         .         .         .       g.2307856
 ttttaatggcccgtttatgtctcatgcctccaaacaacactgaatttgaaaccccccatt       c.*3600

          .         .         .         .         .         .       g.2307916
 ttttcttttcaccaccctgttgagcaattttcccaaaaaaagggcagcaattattaaatt       c.*3660

          .         .         .         .         .         .       g.2307976
 gaattcaagtaagccagccaaagataggtcctaaattgctagtcccagtagaaccacctg       c.*3720

          .         .         .         .         .         .       g.2308036
 atcctaaaccagtgcgaaacaaacagtaacaatgtccccagctgacttcagctaagaacc       c.*3780

          .         .         .         .         .         .       g.2308096
 aatggctcctacccccgccccgcttttttttgttgttttttgttttgttttgagacggag       c.*3840

          .         .         .         .         .         .       g.2308156
 tcttgctctgtcccccaggctggagtgcactggcgcaatctcgggctcactgcaacctcc       c.*3900

          .         .         .         .         .         .       g.2308216
 tcctcctcccacattgaggcgattctcctgcctcagcctcccaagtagctgggattacag       c.*3960

          .         .         .         .         .         .       g.2308276
 gcacccgccatcacacccagctaatttttttttttttttgtattattagtagaagccagg       c.*4020

          .         .         .         .         .         .       g.2308336
 tttcaccatgttggccagggtggtctcgaactcctgacctcaagtgatccgtccacctcg       c.*4080

          .         .         .         .         .         .       g.2308396
 gccttgcaaattgctgggattacaggtgtgagccaccgtgccgagccagccccatttttt       c.*4140

          .         .         .         .         .         .       g.2308456
 aaatgatgttttggttaagagtggaccatgagaattagctgacagcatcccctttctctc       c.*4200

          .         .         .         .         .         .       g.2308516
 tccctgccttggtgggaccctccctgtgtgaccttggtcaagtcctcgaacttttgtccc       c.*4260

          .         .         .         .         .         .       g.2308576
 gtatttaagatggagctgttttacctacttcataagacagttgcgaggtgccattgattc       c.*4320

          .         .         .         .         .         .       g.2308636
 ttgactgcaaaataccttgaaacccttatataaagactgaagtcaacggagcctagtgaa       c.*4380

          .         .         .         .         .         .       g.2308696
 agacttactttgtggcttgtggttgaaagtcacatcaaaagacaaatgtggccacgttca       c.*4440

          .         .         .         .         .         .       g.2308756
 ggaattggagacttactggcatggctctacagctgctcagttattaatcatgcagactaa       c.*4500

          .         .         .         .         .         .       g.2308816
 cctgtcaacactgggagatgcaacatagcaaaaggacagagaaattagaattttttgtgc       c.*4560

          .         .         .         .         .         .       g.2308876
 agaaagccctaaattcccacctgaatgtaacttacagctcccttacctactctcacacat       c.*4620

          .         .         .         .         .         .       g.2308936
 gccctcaaacatgctagattggcttatacataggccaacacaaaatacaaacgtgacgtg       c.*4680

          .         .         .         .         .         .       g.2308996
 ttcatgtagcctagtggctatatgcctattctccatgtaccctgcatggtagtgctgcaa       c.*4740

          .         .         .         .         .         .       g.2309056
 actttaaagtacatttctttcacagcagtattttttttcataagtggcatataaatgtca       c.*4800

          .         .         .         .         .         .       g.2309116
 ttcaatgaaatggggaaatcacgttgagaagttggtctgtcatctcccattgagcaaaga       c.*4860

          .         .         .         .         .         .       g.2309176
 ctggcaggagataataaaaataaatatgggcacacatgtattaatatacagcacgcattt       c.*4920

          .         .         .         .         .         .       g.2309236
 acaagtttattttccagataaaattgtgctataagaacagctctaccaagacagtctgca       c.*4980

          .         .         .         .         .         .       g.2309296
 ccatttccaagtctcagttaatttacagcaactgctgctttcggagatggctgtgaaaat       c.*5040

          .         .         .         .         .         .       g.2309356
 atggaagttcctctcaagtaggccaagaaacagttctagattttactaagttttattttg       c.*5100

          .         .         .         .         .         .       g.2309416
 tcaggttttttaaattttttcagtgagcgtggtgactgcagaggttagtgctgtgaaaag       c.*5160

          .         .         .         .         .         .       g.2309476
 ctgggctaaatattctttctgtaaagtcaaacaggattccatcccctgtgaaataacaca       c.*5220

          .         .         .         .         .         .       g.2309536
 aaatttcactctctaaaagcaacagcatgtaaactagaatgaaagaaggaaattatgtac       c.*5280

          .         .         .         .         .         .       g.2309596
 gtatgcctaatattctttgtgaatgtctttcatttaactaaaattatattagaaaccaga       c.*5340

          .         .         .         .                           g.2309638
 ttgataaataaaaaattcaaagtagttttaattatcctaaaa                         c.*5382

 (downstream sequence)
Legend:
Nucleotide numbering (following the rules of the HGVS for a 'Coding DNA Reference Sequence') is indicated at the right of the sequence, counting the A of the ATG translation initiating Methionine as 1. Every 10th nucleotide is indicated by a "." above the sequence. The Contactin associated protein-like 2 protein sequence is shown below the coding DNA sequence, with numbering indicated at the right starting with 1 for the translation initiating Methionine. Every 10th amino acid is shown in bold. The position of introns is indicated by a vertical line, splitting the two exons. The start of the first exon (transcription initiation site) is indicated by a '\', the end of the last exon (poly-A addition site) by a '/'. The exon number is indicated above the first nucleotide(s) of the exon. To aid the description of frame shift variants, all stop codons in the +1 frame are shown in bold while all stop codons in the +2 frame are underlined.

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