collagen, type XI, alpha 1 (COL11A1) - 3921 nt intron 44 reference sequence

(intronic numbering for coding DNA Reference Sequence)


         .         .         .         .         .         .  g.174522
gtgagtttcctacttcttactgagagaacattatttatttaacaacttttactgtttacc  c.3438+60

         .         .         .         .         .         .  g.174582
attgatatttttatatagtgctacttactttcctagccaatacttataataccaatacta  c.3438+120

         .         .         .         .         .         .  g.174642
cattacctctgcagttatatcattctataattttatatatttgtgaagttttctatttct  c.3438+180

         .         .         .         .         .         .  g.174702
gtgattaagtaaagtatgatgattgtaaggccattatttataactctgctatagcacatg  c.3438+240

         .         .         .         .         .         .  g.174762
aaagagtaacataatgaaatagtcttttttgtatgattatgagaaattttgtatacatat  c.3438+300

         .         .         .         .         .         .  g.174822
atttaccaaaattaacagtattactatgttctacatgtatacaaattggtcacttattcc  c.3438+360

         .         .         .         .         .         .  g.174882
catatgttataaatacttattttaaaatttttcatttaaatcataaaacttcaatataat  c.3438+420

         .         .         .         .         .         .  g.174942
tttggttgttcattcaaatggtgtgttcactcttgtctttatgatgtttttctttggtca  c.3438+480

         .         .         .         .         .         .  g.175002
ctaccagtatatattctctttaaattatgtatttaaacatgttcctacttcttaaatgaa  c.3438+540

         .         .         .         .         .         .  g.175062
atatgttagatgatgatactgtcacatgcttcagcacttccttactaatttatactctct  c.3438+600

         .         .         .         .         .         .  g.175122
aaagaatatctgtggacattattttctaagttctttttttttaatttttttttcccttta  c.3438+660

         .         .         .         .         .         .  g.175182
agtgttcatgtatttgctctctgatagaaacataaattgggggagtacagagatatgtcc  c.3438+720

         .         .         .         .         .         .  g.175242
ttcaagttttttttttcacctagtatggaagtttatacattatccccagcaatttcattc  c.3438+780

         .         .         .         .         .         .  g.175302
taacagaccagtctggttctattttgtgatccatcagtctgatgcttttagggttggatt  c.3438+840

         .         .         .         .         .         .  g.175362
tactgcctacattaacacataacggaaagaagatttttattagaattgatggaatcccaa  c.3438+900

         .         .         .         .         .         .  g.175422
actgaagagttaccatagtcctatgagatgaatttttctaactaaaaagaaaacactaga  c.3438+960

         .         .         .         .         .         .  g.175482
atgaaaagagaaaaagcttgtagtaataattgtagtatttaatgcataattcatttttat  c.3438+1020

         .         .         .         .         .         .  g.175542
atgcagtgaaacaaaacaccaacaaacaggtgatagcactgatactccagatccatgctg  c.3438+1080

         .         .         .         .         .         .  g.175602
taaaattatgacaagaaattgtgtacagaaaaccggctgcatatgtttgatgcagttagt  c.3438+1140

         .         .         .         .         .         .  g.175662
attgactatacatttacaaaatgtattttggtatctgccttagtctgttttgtgttacta  c.3438+1200

         .         .         .         .         .         .  g.175722
taaatgaatacccgaggctggataatttataaggaaaatagggttacttggcttacagtt  c.3438+1260

         .         .         .         .         .         .  g.175782
cagcaggttgtacaaagaagcctggggctggcatctgcttggcttatggtgagggctttt  c.3438+1320

         .         .         .         .         .         .  g.175842
gttctgtgtcaaaacatggcagagaagttcaaaggggaaccgggcctgaacaaggaggga  c.3438+1380

         .         .         .         .         .         .  g.175902
ccaaaccctacaggagtgctgactttaaaacaaccctctttcatgggaactaattcattc  c.3438+1440

         .         .         .         .         .         .  g.175962
cttcaagaaacaattcaatctccccagagcaagaactcaatcgctatgcagctattcctg  c.3438+1500

         .         .         .         .         .         .  g.176022
atggatccaccttaagaaccaaaacacctccatttaggccccacccccaacactgggaat  c.3438+1560

         .         .         .         .         .         .  g.176082
taaatttcaacatgagttttagtggggacaaaccatatccaaacgatagcagtaaattac  c.3438+1620

         .         .         .         .         .         .  g.176142
tttagattccatttagatttcttaattataaataaatactatggatttaattagactacc  c.3438+1680

         .         .         .         .         .         .  g.176202
ttatacactcgacagaagccacatttttaaaagttttatttactccttaaaagcaatgct  c.3438+1740

         .         .         .         .         .         .  g.176262
aaaatgactgcatggccattatatgggccagcaaatctcaaatatttttgccttaggacc  c.3438+1800

         .         .         .         .         .         .  g.176322
cttgcatactcggaaaggtttttaggagcccaaaaagcttttgtctatgtgggttactat  c.3438+1860

         .         .         .         .         .         .  g.176382
catatgaatgaaagctgatatatttaaaatatttatgtattgatttatttataattaaga  c.3438+1920

         .         .         .         .   g.176423
ataataagcccaaagcacttttaataaaaactagctatatt  c.3438+1961

--------------------- middle of intron ---------------------
       g.176424     .         .         .         .           g.176463
       c.3439-1960  tttgcaaataaaaatatatagtcccaagagtaccattgtt  c.3439-1921

.         .         .         .         .         .           g.176523
acatttgttttgtctagcttaatagaagaagctatattctcatatctagttcagcctgtg  c.3439-1861

.         .         .         .         .         .           g.176583
gtgacatgtttttttggttgaaagcatgaagaaaatctaagctcacataaattatgtagt  c.3439-1801

.         .         .         .         .         .           g.176643
tataaaagggaggggcattttcagtaccttttcagataattttgaatattctttgatttt  c.3439-1741

.         .         .         .         .         .           g.176703
acatagaaattttataagtggtagtttttcttaagggtcaattgcacaacagaatttgaa  c.3439-1681

.         .         .         .         .         .           g.176763
acaaaaacagtgagctttttgtgctattacattatattccactgctctatcttgcacgtt  c.3439-1621

.         .         .         .         .         .           g.176823
gatgactatgtttcatacataattttgtaatatccttcattgataatttggaaattattg  c.3439-1561

.         .         .         .         .         .           g.176883
atttcctgggtaaggtcctcaaagtgttgacacaattctttatgcgatattaatatcata  c.3439-1501

.         .         .         .         .         .           g.176943
ggaaaatactttcagattgggaagatataaagcctgcaatggcagatgagacatttccaa  c.3439-1441

.         .         .         .         .         .           g.177003
aattctaatttttgctttaaagtttgaacgttattgacagtaaatactgtcagttgtttt  c.3439-1381

.         .         .         .         .         .           g.177063
ctttgaaatccaaggcttcctttatattgaataacatctgccaaaatcatacttactatt  c.3439-1321

.         .         .         .         .         .           g.177123
tataatcacacttattatttataactgattatttataatcacatttattatttataacta  c.3439-1261

.         .         .         .         .         .           g.177183
aaaaatcatagtttttctgtcagccgctctttcaagtaaaaatagcgttccatgtaaaag  c.3439-1201

.         .         .         .         .         .           g.177243
ttagtgttccatgtaaaagttcagccagcatttcaaactataatccaaatgtttgtaggg  c.3439-1141

.         .         .         .         .         .           g.177303
cttttttttttttttgagacaagcactgtacttcagtatgaggcaaacatactttatgta  c.3439-1081

.         .         .         .         .         .           g.177363
tgtcttcagtttgtcaaatgaatatgaaaagacacatattcaaggtcaatatttaataat  c.3439-1021

.         .         .         .         .         .           g.177423
attaataactttcaaagcctcatcaatacaattacatccatgacattcttagatggaaca  c.3439-961

.         .         .         .         .         .           g.177483
gccatttttgtgttgattgaaagtatatcgtggtaaaatacaattaatgctattacaaat  c.3439-901

.         .         .         .         .         .           g.177543
ggtagctaccaacatgataagcgctaagttaccagcaactttattcaccacggattttac  c.3439-841

.         .         .         .         .         .           g.177603
atcattagtgcaaaagtctatatagttaaaggacaaaaaatgccttactgttgttatgag  c.3439-781

.         .         .         .         .         .           g.177663
aagagttatgaactagcagaatcctaaaagcatatcaagaactcccaatggcccatgaac  c.3439-721

.         .         .         .         .         .           g.177723
cagcttttcaaaatcttgctttaacagttcccccacaagtagtagttacaatacagaaca  c.3439-661

.         .         .         .         .         .           g.177783
atacagttcaatgacagttttatttctttaatgcctgaaccttttatattgcctgacccg  c.3439-601

.         .         .         .         .         .           g.177843
ttactaatgtaagaaaatgagacaatgaagaaatatctatgcatgtaagactcataatgt  c.3439-541

.         .         .         .         .         .           g.177903
cttttgaaaactattgctcaaaataagaggtcctggtgtacttaatatataacaattagt  c.3439-481

.         .         .         .         .         .           g.177963
ttacatgtgtacgcatatgtgaaaattccaaattttcatatattactacattctatctgt  c.3439-421

.         .         .         .         .         .           g.178023
atagaaccctcagaattctgatattcactcagaagacagtatatagacaattttttcatg  c.3439-361

.         .         .         .         .         .           g.178083
ggccctttcctaatcatatttatctcattaaagaaatctgatactttgaaaattttcaaa  c.3439-301

.         .         .         .         .         .           g.178143
tgcgaatcttacaacttgatgtctgatagcatagaaatctatcttgaagattcacaacat  c.3439-241

.         .         .         .         .         .           g.178203
tacaaatgagagtgttttcaacaaatgtcaacttaaaattgatttcaaatgtgaaagctt  c.3439-181

.         .         .         .         .         .           g.178263
gagtctcaaggagtaaaataaataatgattgcagtaaatgcaaaataattctatgtgatg  c.3439-121

.         .         .         .         .         .           g.178323
cttctttttttccaaaggagtgcagaagtgtttgatcttggtaggctaaatgttctgttt  c.3439-61

.         .         .         .         .         .           g.178383
catatggctgaggctcttctggcttcactttaaaaattacttatttttatctcactgcag  c.3439-1


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