collagen, type II, alpha 1 (COL2A1) - 4111 nt intron 01 reference sequence

(intronic numbering for coding DNA Reference Sequence)


         .         .         .         .         .         .  g.5326
gtaagtcttcccccgcccctgcctgcctgcctgctttccatgcgtccctcagcatccttc  c.85+60

         .         .         .         .         .         .  g.5386
tccccggcccgctccagctctggagcccgcggctccgggctaaaacggctcccggggtcg  c.85+120

         .         .         .         .         .         .  g.5446
tagcgcgccgacttaggcacaggacacgcagaagttcaccaagaagagttctgccaatca  c.85+180

         .         .         .         .         .         .  g.5506
aggactctgtcccagggtcctcggtgcccatcgcagttgcaagtatttgcaggtccctac  c.85+240

         .         .         .         .         .         .  g.5566
gttgcgctagaatactgaacttgcaaagtgttggctcggagaagtttgcgcacagatata  c.85+300

         .         .         .         .         .         .  g.5626
aatgggctcttttccaccagctttgataattaggcgcacatgcacacagctcgcctcttc  c.85+360

         .         .         .         .         .         .  g.5686
gaagcacttcgagttcagcaaaaacagatctcaactcatcgaacttaggtgaagtaggaa  c.85+420

         .         .         .         .         .         .  g.5746
agagagagcgcgagcgagggagcaagcaaacgccaaagggttgacttcacagcctgtcca  c.85+480

         .         .         .         .         .         .  g.5806
aggcttggtggctggtgggctcaaagcagagttagacaaaggggactaacactctgacac  c.85+540

         .         .         .         .         .         .  g.5866
tggtgggctgaaatcccaggccacaaagaacggcttccgataggccctctgagacctcag  c.85+600

         .         .         .         .         .         .  g.5926
cgcctctttagggtaccctccccctcccagctggccctggagcaaggtgcagccctagcg  c.85+660

         .         .         .         .         .         .  g.5986
ctcatctcgacttccctccgtccgcctgcgcctctcttctgataaagggtacagaaactt  c.85+720

         .         .         .         .         .         .  g.6046
ccagtaggagaggccatctgaaagacgataacattccaaccagaccgtgcttttcaaatg  c.85+780

         .         .         .         .         .         .  g.6106
cccccgaaaatagcgcccccttccccgcggtcttaccccattccccgccgccccgaggta  c.85+840

         .         .         .         .         .         .  g.6166
ctacaatgagttacttttctaaattctggaactcaccgagccaggctgcgtggtgtgtgt  c.85+900

         .         .         .         .         .         .  g.6226
gtgtgtgcgtgtgtgtgtgtgtatgtgtgtgtcagggaaggggagcaggctggtcgattg  c.85+960

         .         .         .         .         .         .  g.6286
ctacggttgctacaactatttcaaccggtatagttagagatggctcttgtagtcgggtcc  c.85+1020

         .         .         .         .         .         .  g.6346
aaatgctgttcggactgcacctttctacccctcctttggtaaggtccactgtctgggatt  c.85+1080

         .         .         .         .         .         .  g.6406
atattcaggacaaacgaagcctggaaagtgtattaggtagagaggatttttttttccacg  c.85+1140

         .         .         .         .         .         .  g.6466
tgtttgggcacgtttccgacggctgggattccagccctgtctttgtatgttacagattgt  c.85+1200

         .         .         .         .         .         .  g.6526
aaatcaatcgcagagggaaactcttcggcggggggaataaaagttctctgccttcgaggc  c.85+1260

         .         .         .         .         .         .  g.6586
tctgtgggccctctcctgccaccaggctgtttccagggatagcgtggaaggcggcgggct  c.85+1320

         .         .         .         .         .         .  g.6646
caggcgggctttccggtcattagcgcagcgggggcagggctggagcctgcggcgcagctg  c.85+1380

         .         .         .         .         .         .  g.6706
cgaggagccgggagcaggagactctggccgggtcacccggtagtgcgctaagctggaggc  c.85+1440

         .         .         .         .         .         .  g.6766
gcgctcctgggcatttgaggaatacagcgtgactatacgtggcctggactcagactgact  c.85+1500

         .         .         .         .         .         .  g.6826
atatttttgtactacatttacaagcacacgcccacaaagctgtcttcttgactgacccct  c.85+1560

         .         .         .         .         .         .  g.6886
gccttagtgcgcaatggaattagctgggtggctttaaaataattctcaaattctccatcc  c.85+1620

         .         .         .         .         .         .  g.6946
ggtattagggtcgcttgcttaattaggcggtagagctctctcatcgccgcatctttcctg  c.85+1680

         .         .         .         .         .         .  g.7006
ggagggagtgattccacagcttctccggcccaaaccttccagtcgctcctcctcccagag  c.85+1740

         .         .         .         .         .         .  g.7066
ggagtgtgattctgcatccgagaggctgattttgcgccctggagcatcccaccttttata  c.85+1800

         .         .         .         .         .         .  g.7126
acttcccccgcctggggtcagcggacccaaaggtgtgacgtggggaaatgcgcagtctgc  c.85+1860

         .         .         .         .         .         .  g.7186
gtggacgtcaggaatgtcagacacctagagctcggccacacccctcctctccatctttcc  c.85+1920

         .         .         .         .         .         .  g.7246
acgagtttgagaaacttactggcggcggcgtctttgaccctcatctgcatttcagagccc  c.85+1980

         .         .         .         .         .         .  g.7306
tcgcctccgaaagtgcccctggctcaggggagagatctcaatcctcctttgtgaggcttg  c.85+2040

         .        g.7322
tttgcattgggagatt  c.85+2056

--------------------- middle of intron ---------------------
                                  g.7323          .           g.7337
                                  c.86-2055  ggcagcgatggcttc  c.86-2041

.         .         .         .         .         .           g.7397
cagatggggctgaaacgctgcccgtatttatttaaactggttcctcgcggagacctgtga  c.86-1981

.         .         .         .         .         .           g.7457
atcgggctctgtgtgcgctcgagaaaagccccattcatgagagacgaggtccagtgggtt  c.86-1921

.         .         .         .         .         .           g.7517
ctctcgtactcccagaccccctctcccacaatgcccccctgtgcccgcccgccgccacct  c.86-1861

.         .         .         .         .         .           g.7577
ctcggctccagccctgcgcagagcggcggtgaagcaaaacagttccccgaaagaggtagc  c.86-1801

.         .         .         .         .         .           g.7637
tttttaattggcttgccacaaagaatcacttatacggccctgcggtaatgaggggaaccg  c.86-1741

.         .         .         .         .         .           g.7697
gatcaggcgcgccgggatgctatcggcagccgttttggagcagcaattatggtggtgctg  c.86-1681

.         .         .         .         .         .           g.7757
ggctcctccgtccacacctaggggatccggttacggcgctggctcctttctggggcagtc  c.86-1621

.         .         .         .         .         .           g.7817
atttaatcccacttttcactctcccggtgtctgtgagcgagccgtgtccagagccgcagc  c.86-1561

.         .         .         .         .         .           g.7877
cacagagtcactcagcggctcttacacccagcgcagcctggccccgcccctgcgccggcg  c.86-1501

.         .         .         .         .         .           g.7937
cttcccgggccgcccttccccgggaaatctgatccgcacggggagtggcccctctcctag  c.86-1441

.         .         .         .         .         .           g.7997
catttccccctctcctccctgggtcctcatgggcgagggtgggctctcctgtagtctggg  c.86-1381

.         .         .         .         .         .           g.8057
ctggagcgcattaaccgatgccccctctcccacaccttcctcaccgcctgcattccactg  c.86-1321

.         .         .         .         .         .           g.8117
ctccagctattttaacggcgggtgtgtccccgcaacttctgtattttccctggaatccct  c.86-1261

.         .         .         .         .         .           g.8177
caccctcctgtgattatcttgcccaaaggctaggcggatttcttctagtgggaaagtaaa  c.86-1201

.         .         .         .         .         .           g.8237
aaggaaagtttatctttggattttcactctctttaaagagcagtgggcaggctcgtttct  c.86-1141

.         .         .         .         .         .           g.8297
ttctcgccctctgggtttgtggctctttcctattattcatcccctgctgctgctattgcc  c.86-1081

.         .         .         .         .         .           g.8357
ttggggattttgatgagaaaaacagcgctgggcgctccctagcacgtggtgcgggctcta  c.86-1021

.         .         .         .         .         .           g.8417
cagcccttggctgctaaggagcgctcttgtcagcacaggtttcatttgcagcatgaattc  c.86-961

.         .         .         .         .         .           g.8477
cagacggcagggcgctggtggaggagactagtccctgctattcttcctctgcagtcttgg  c.86-901

.         .         .         .         .         .           g.8537
aggaggccaggcctggactggccaatcttagccctagccaggtattcaacgacccctgct  c.86-841

.         .         .         .         .         .           g.8597
ccccaaactggggtgctgttttcagatggaggcagggcctctccaggcagggctacaggt  c.86-781

.         .         .         .         .         .           g.8657
ggaggtcagcactgggggcgctttggctccactggcctcctaagcagtttattagcctgc  c.86-721

.         .         .         .         .         .           g.8717
ccaagccccaagtgtattgtttgaatgggtctatccccctccccaaattggtcctaattc  c.86-661

.         .         .         .         .         .           g.8777
taatatggttcaaagaatgagacaagatcctaattctaatagctcgtcttttcacccccc  c.86-601

.         .         .         .         .         .           g.8837
tttcttatatacctatttttggagcctcactgcttatagattccaatttttgtaggtaga  c.86-541

.         .         .         .         .         .           g.8897
attttctacattccctctgaatgttagttgtcagttgtatttagctaatcccataattcc  c.86-481

.         .         .         .         .         .           g.8957
cagaggaaggcagaagaaagaagacttctctgctcctgggctggtggaagggaggtctcg  c.86-421

.         .         .         .         .         .           g.9017
ccatttttctgtctcctttctttttatagtcccagaattcctattcagaatatcttgtct  c.86-361

.         .         .         .         .         .           g.9077
cctcccttccgctcaccctccaactccctccacccactccatcacctggtctcccccgta  c.86-301

.         .         .         .         .         .           g.9137
ttaggtgggtaaagagaatatagtatagtaaccccccaccttcattgctgggtcaagatt  c.86-241

.         .         .         .         .         .           g.9197
ttcactggtgaatagacaacatggtgcaaggtgcataataaatatttgttgaatacatgg  c.86-181

.         .         .         .         .         .           g.9257
aaaaatcaatgatgttttaggaaaataatttttaagttctatatgtccaggtggccccag  c.86-121

.         .         .         .         .         .           g.9317
cctacattcttcagcatttgaattctgtcaagttgactgcaacctctctctttttctctc  c.86-61

.         .         .         .         .         .           g.9377
tggctccccaccccctccttcccttggctctctgcttctccctccccacccttggtgcag  c.86-1


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