collagen, type II, alpha 1 (COL2A1) - upstream reference sequence


                               g.1      .         .             g.21
                               c.-5181 tgagagagacaaatgctcctt    c.-5161

.         .         .         .         .         .             g.81
aaaggcagaaagctacccaccttaagaaaatgcaatatttcgcacgacttttgttgtctt    c.-5101

.         .         .         .         .         .             g.141
tgtttttaaagtgaaatgggaagatcatttctgtataaaaatacagacatttcttcaaaa    c.-5041

.         .         .         .         .         .             g.201
tgtaagcctttaaaaagcccagacacctttatcttttcccgcaaaggtctagctagtagg    c.-4981

.         .         .         .         .         .             g.261
aggtaagaagaagaggggaaagtgagaagaaacgtagatctgagcctgactcggtggcat    c.-4921

.         .         .         .         .         .             g.321
tcaaggagtcctccatgtctggccttgccttcaccccttactgccatgtcttattcccag    c.-4861

.         .         .         .         .         .             g.381
ggccctgcagatggctccacattgtcctggggccactgccatgtcttctggtgcatctgc    c.-4801

.         .         .         .         .         .             g.441
ccttcgttgcttccatttgggagccatcctgccctctcactgtacctctgcatttcaaac    c.-4741

.         .         .         .         .         .             g.501
ccccacccatgcttggagacatgcttctcttaggaaacctccccccagcttactccatgg    c.-4681

.         .         .         .         .         .             g.561
cttccagaatgccattctttctttcctttctttctgtttctttcttcttcttttttttta    c.-4621

.         .         .         .         .         .             g.621
gggggttggggagagtgggataccttttttgcagcattttgtacaatcatttttttccta    c.-4561

.         .         .         .         .         .             g.681
tttcccctacagatgcagaggtggtatctaaatcctctctgtatccccatctcatacaga    c.-4501

.         .         .         .         .         .             g.741
agtaggtgctcagtacgagtcctaagctgaatttgtatggcactaggacaggatggagga    c.-4441

.         .         .         .         .         .             g.801
gactgggtgggattcttggtgctatttgcatttgagaatacatagtaacacatttatgct    c.-4381

.         .         .         .         .         .             g.861
cctatggaatggaatgtacaccataaatctggaaaaccctatcctggacagtcttgattc    c.-4321

.         .         .         .         .         .             g.921
tgttactctgcccccaaaatgccaaaggaaaacataaacacatcttgaaagactgtctga    c.-4261

.         .         .         .         .         .             g.981
acggagcccaaccaacagaagctgagtgtcactgagtaagctgggctcaccacccccagg    c.-4201

.         .         .         .         .         .             g.1041
cacggctgctgtgtgaagtctgtgcattcaccacctgccatatttggggtgggcttacct    c.-4141

.         .         .         .         .         .             g.1101
ctttggaatgtgaatccttcttcactttatcactatttttaaatgggatttgtgtagagg    c.-4081

.         .         .         .         .         .             g.1161
aagagaaagatatcttttctttacagcctgtctacaaatatctttcccaataaggctgtg    c.-4021

.         .         .         .         .         .             g.1221
tcaacctgagtctaaatttaatgcctccataaaagagagaaaaatagtgaaatggttatt    c.-3961

.         .         .         .         .         .             g.1281
ttgtctacacgacacaatattgctgatttaatccatctgtttctctgaattgggctgact    c.-3901

.         .         .         .         .         .             g.1341
tggggtagatacactgattgtgactgtttaatttctttctttctttctttctttctttct    c.-3841

.         .         .         .         .         .             g.1401
ttctttctttctttctttctttcttcctttctttctttctctctctctctctctctcttt    c.-3781

.         .         .         .         .         .             g.1461
ctttcttttgtttgagatgaagtctcgctctgttgcccaggctggagtgcaatggcgcaa    c.-3721

.         .         .         .         .         .             g.1521
tctcaactcactgcaacctctgcctcccgggtccaagagattctcctgcctcagcctcct    c.-3661

.         .         .         .         .         .             g.1581
aagggactacaggtgcacaccgccacacccagctaattttcatatttttgtagagatggg    c.-3601

.         .         .         .         .         .             g.1641
gtttcaccatattggccatgctggtctcaaactcctgacctcaagtgatcctctggcctt    c.-3541

.         .         .         .         .         .             g.1701
ggcctcccaaagtgctgggattataggtgtgaggcacagcaccctattgtacctgtttaa    c.-3481

.         .         .         .         .         .             g.1761
tttctaactgttctacctacagttacccatgctgtacttaaaggtgtaagtgaggctggc    c.-3421

.         .         .         .         .         .             g.1821
catgtgggacactcatctcggccatcgatgctcttcttctaccaactggggaaaacagaa    c.-3361

.         .         .         .         .         .             g.1881
gctctttgttttcagttcagtggctccagaaattgcagcatttccttattagtctgacac    c.-3301

.         .         .         .         .         .             g.1941
tgctatgatagaatatttttcacattaagtgaatgaacatttatttacaacctttctcaa    c.-3241

.         .         .         .         .         .             g.2001
atatggaatacatatttcctgtctcctcaaagagaccacattaaacttaaattagcattt    c.-3181

.         .         .         .         .         .             g.2061
tattggacatttcagtttatcattatgaatcgcagggactacagcagatgctgtagatcg    c.-3121

.         .         .         .         .         .             g.2121
ggatattccctggaagcattgatgactgtaagggcattgaccctaccccactgaccttcg    c.-3061

.         .         .         .         .         .             g.2181
gctaccatgttttgtatttgttgtgtcaacttcacattgcttttctgtgtcctctcttac    c.-3001

.         .         .         .         .         .             g.2241
tctccctttttcctgttctcattgtgcttcatcaacaactgctgctttcctatctcacct    c.-2941

.         .         .         .         .         .             g.2301
ctagttttctgcatctaattggtgaggtcagatgccattacgtgttaatacaatatctaa    c.-2881

.         .         .         .         .         .             g.2361
actatgaattagcagacatggagtaagaaggactctacagtgcacaaaatgcatagcttt    c.-2821

.         .         .         .         .         .             g.2421
atataacatcaattctggctatttagtggtttagttccccttcttttcagtttcttgggt    c.-2761

.         .         .         .         .         .             g.2481
atggtatggatagtgagattgttggacgatcaatttccaaatcagtgatttgcatatgtg    c.-2701

.         .         .         .         .         .             g.2541
tgccacatataggtctaattccagtttgagtcacaaattagaggtttttaattagttgtt    c.-2641

.         .         .         .         .         .             g.2601
tggagtcacagatgggtaaaatattaatgttggtgttcaattggctttagaattttaata    c.-2581

.         .         .         .         .         .             g.2661
atttccatagtttattttggctttgtcaatttaaattttaaattttatttttcttatgtc    c.-2521

.         .         .         .         .         .             g.2721
aattcccgttgctggtgaaaagaaattttcccacagtgggtggagagcttaacttgtact    c.-2461

.         .         .         .         .         .             g.2781
catagatggaccatgattgctggaaggaatccaaagctcttatatgtagacacagtctat    c.-2401

.         .         .         .         .         .             g.2841
tggcaaagatgaatcacagagctagaggatgaaattaagaacaaatttgcaacgagtctg    c.-2341

.         .         .         .         .         .             g.2901
taccactttgctactcactaaactggatcattttgaactaggcttcgattttttccacat    c.-2281

.         .         .         .         .         .             g.2961
actttagtgtgttctcccaaattctttttttttctgttgaatttttatgacaacttgtat    c.-2221

.         .         .         .         .         .             g.3021
ttgaagtcagttgtataaatgcctttatagttgtatctaaattattagtccacaggggct    c.-2161

.         .         .         .         .         .             g.3081
ttcctaactcctatgtgttagaattgtgctaggcacagttcttgtccccaagcatcttcc    c.-2101

.         .         .         .         .         .             g.3141
aagctcattgatgagataaagaccaatggatataaggggaaaaaattaaaactacacaaa    c.-2041

.         .         .         .         .         .             g.3201
aacatatgtagcttaggctataaatgccagggggattcagaaagccagggagacgttgtg    c.-1981

.         .         .         .         .         .             g.3261
ttctagagatatcagagaaggcttctcagaggggctttaacctaggaggtcttgataaat    c.-1921

.         .         .         .         .         .             g.3321
gtgtggaatttggtcattctatcttccaggtagagaatataggaccttctgagccccaaa    c.-1861

.         .         .         .         .         .             g.3381
gaggacatggggcactgatggcaagagaccagctttcttctagcagagattgggcctgag    c.-1801

.         .         .         .         .         .             g.3441
gaagagcccagagcttaatgcaagcccctgaatgggagcatggagactcagacaaggccc    c.-1741

.         .         .         .         .         .             g.3501
gtggaaggtaggggagatgctggaaactggttgaattcttccccatctccatccagactg    c.-1681

.         .         .         .         .         .             g.3561
gacaaagcctagaagcatttccttcaacaatgagttctttccctttccaaccagagcact    c.-1621

.         .         .         .         .         .             g.3621
tggaactccagcctctaccaggacaagtgtcaaagcatgataggctagggatggggtccc    c.-1561

.         .         .         .         .         .             g.3681
aggacccctggtggaagcctaaggcccagaagtagcttctttcaagtgctctcagcttct    c.-1501

.         .         .         .         .         .             g.3741
agggggaaagctccagagaaacaaaactgcccaggagggcagaagttctggttaagtcag    c.-1441

.         .         .         .         .         .             g.3801
accccaaattctgagtttcattttgcctatagttctttgggggaccatatcgctcaaaag    c.-1381

.         .         .         .         .         .             g.3861
gaaggtctgtttggggacgtttcctccctggtatgaaaggaggcaccggagaccaagaga    c.-1321

.         .         .         .         .         .             g.3921
agagaccagctaagccctgggaagaaggcagtttggctaaggtgagagagggcgctcacc    c.-1261

.         .         .         .         .         .             g.3981
ggggaaggtgaggtgaggcggcaagcggagggctagggggccgactgggaaattctggcg    c.-1201

.         .         .         .         .         .             g.4041
cttctccccggctcacagaactcgccagctggatcggcctccccgatccctggccagggc    c.-1141

.         .         .         .         .         .             g.4101
cgcagcagtgaccaaccgtccctggccaaagctgctctacgacggccggcagtgcccact    c.-1081

.         .         .         .         .         .             g.4161
ccccgggggactcccggaccccagccaggaagagcagacaccacgtctgagcctggagct    c.-1021

.         .         .         .         .         .             g.4221
agacagtccccccacagcaggcagcttgcaccgtttagtctcggctccctccgtcctctg    c.-961

.         .         .         .         .         .             g.4281
tggctctttcagtccccttcccagggcctgcccctgccccccacaccttcacacaggtct    c.-901

.         .         .         .         .         .             g.4341
ccttctgtgcagtaacacaccagctcttttcctggctgtcggctcaggccaacttcggcc    c.-841

.         .         .         .         .         .             g.4401
tgtgctccagaggaagccttcaacgcagagctggatgggggaggggtggagggcagtcgc    c.-781

.         .         .         .         .         .             g.4461
tgtgaacgtccaggtgggagtctggggaccaggtactgcagggaagggctaaaagatagg    c.-721

.         .         .         .         .         .             g.4521
tcggggtaacccttcagatctggctcagctagcctgtctccaagatttaggactctgaat    c.-661

.         .         .         .         .         .             g.4581
ctctgtgggctcctccctgtccccactcccaaacgcctgacgcggtgccccctcgccctc    c.-601

.         .         .         .         .         .             g.4641
cgctgctcctttctaccgctttccctcctccctcccatgtcttttccgtccttggtctag    c.-541

.         .         .         .         .         .             g.4701
ggctctcggcctgcgcctctgcaaacaccccctcccctccaactccggcagaactccgag    c.-481

.         .         .         .         .         .             g.4761
gggaggggccggaggccacccttcccgcctgtggtcagaggggggcagcgccgcagcccc    c.-421

.         .         .         .         .         .             g.4821
gggtttggggggcaggggccatctctgcgccccgcccgatcaggccactcggcgcactag    c.-361

.         .         .         .         .         .             g.4881
gggtggagggcgggaagcgtgactcccagagaggggggtccggcttgggcaggtgcgggc    c.-301

.         .         .         .         .         .             g.4941
actggcagggcccaggcgggctccgggggcgggcggttcaggttacagcccagcgggggg    c.-241

.         .         .         .         .         .             g.5001
cagggggcggcccgcggtttgggcgagttcgccagcctcgaaaggggccgggcgcatat \ a c.-181


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