collagen, type V, alpha 1 (COL5A1) - 8829 nt intron 02 reference sequence

(intronic numbering for coding DNA Reference Sequence)


         .         .         .         .         .         .  g.54334
gtaagtgccgcacccttctgtttggggcggtgggtcccgttggccctctggcctccagcc  c.277+60

         .         .         .         .         .         .  g.54394
aggagcagcgctcaagcctgcgtggtggcagaagcgggctcagctttccaggaagcccct  c.277+120

         .         .         .         .         .         .  g.54454
ctcacgagcccggcttcgtttcactgtagtgaaaaggcagttgcaacagtgggattttgt  c.277+180

         .         .         .         .         .         .  g.54514
ccttctggacgggactgggctttgtcactgtccttctctgctggatgtgggtgggtgggt  c.277+240

         .         .         .         .         .         .  g.54574
gtggcccagtgcccttgaccttctatcagctgtgtctctggtggtagctgggccgccagg  c.277+300

         .         .         .         .         .         .  g.54634
actccaagggcagaaagagtcggatgggtcctgagggatgaggttgagagaaacctcggg  c.277+360

         .         .         .         .         .         .  g.54694
gtcgtgggaaaggaagcacttccagacagaagcttaaccaggggcagtgacattaagaga  c.277+420

         .         .         .         .         .         .  g.54754
cgatgaatcaaacgtcgtgactcctagcaagagcatgggaggcttttaatgagagtcaac  c.277+480

         .         .         .         .         .         .  g.54814
tgctaaatgccgggtctctgcttttaattacatgcccggagcgggaagcagcattagctc  c.277+540

         .         .         .         .         .         .  g.54874
taagatacagcatccaagttgtccctgtcacccagtcgtggggcggcacctgccacagtt  c.277+600

         .         .         .         .         .         .  g.54934
aattaaaccctctgggcttatctggacgtgattaacgagctgttgatggagaacctcatc  c.277+660

         .         .         .         .         .         .  g.54994
gccttgacccagccacttgctcatggcctggactaaaatgagctcctctttctgattcag  c.277+720

         .         .         .         .         .         .  g.55054
atgagaaagggacgggggatgtagggcaggtgagttcactttatgagatgctctgtaatt  c.277+780

         .         .         .         .         .         .  g.55114
attagaagacagcgcagcatctttttggtggacctggaggtgaccccggcattgaaccca  c.277+840

         .         .         .         .         .         .  g.55174
cgatcagggcagtctttgaatgctccgtggtgtttctgatgatcgtgtccccacggggcc  c.277+900

         .         .         .         .         .         .  g.55234
cctgaaggacaccctcttttgaggggctgtttctgcttccacagacgtgctctctgtaca  c.277+960

         .         .         .         .         .         .  g.55294
ctcatccccagccattgcccagccctcctttacatccatgtgaccttgaagagtttgtct  c.277+1020

         .         .         .         .         .         .  g.55354
ctgagagaatctgggcagttcttttcaagaatgtttttgagaacgagttatttcaagaaa  c.277+1080

         .         .         .         .         .         .  g.55414
caccttcgaggcaccgagtctctgccttgcagcttggtggaggtgaggtgaagtggcctg  c.277+1140

         .         .         .         .         .         .  g.55474
ggacccctggcagcccatattctcttaaacagcccacctctgggtaccagagtggccctg  c.277+1200

         .         .         .         .         .         .  g.55534
ggctgtggatccccagcctcaagcgtgtggaactcatcggctcagacagcctgtccccgc  c.277+1260

         .         .         .         .         .         .  g.55594
aaaggactgcagcggtttcgtttctccaggcctctggaggagcgttcataagcttctggg  c.277+1320

         .         .         .         .         .         .  g.55654
agagcatctcttttggaattagccatggaatcctcacttggaccttggcccagaaattgc  c.277+1380

         .         .         .         .         .         .  g.55714
acccttttctgccccatgacccccggtttagaattcgtgacctagagatcctgggagggc  c.277+1440

         .         .         .         .         .         .  g.55774
tggtccagggaagggcttagagagctgattgccgaggaccacatggactctgggtgtgtg  c.277+1500

         .         .         .         .         .         .  g.55834
acacgctgaggggcaccctgggaagtaagcgctcctgctttccaaggggatcttcagcca  c.277+1560

         .         .         .         .         .         .  g.55894
ctttgtttaatcttctctgtgtcacccaattctggggtgtgggcaccacacactcactgg  c.277+1620

         .         .         .         .         .         .  g.55954
actttgtccttctctgctggattatcttgtggccagaaatattacagtatctcaggaata  c.277+1680

         .         .         .         .         .         .  g.56014
cgggctaattattggataaataatctaggatcagctgggcgcggtggctcaccctgtaat  c.277+1740

         .         .         .         .         .         .  g.56074
cccagcactttgggaggctgaggcaggcggatcacttaaggtcaggagtttgagaccagc  c.277+1800

         .         .         .         .         .         .  g.56134
ctggccaacatagtgaaactccatctctaccaaaaatacaaaaattagctggacgtggtg  c.277+1860

         .         .         .         .         .         .  g.56194
gtgcgcgcctgtaatcccagctattcgggaggctgaggcaggagaatcacttgaacctgg  c.277+1920

         .         .         .         .         .         .  g.56254
gaggcggaggttgcagtgagctgagatcgcaccactgcactccagcctgggtgagagtga  c.277+1980

         .         .         .         .         .         .  g.56314
gaatatgtcaaaaacaaaaaaaaaggaaaagaaagaaatggcttggccttccagcagttt  c.277+2040

         .         .         .         .         .         .  g.56374
ctgcatagcaggctctctgtgcctctctcagcagggaccccatccctgagcagggctctt  c.277+2100

         .         .         .         .         .         .  g.56434
atctacagatcagttggtttccatgtctgtttccggcttttaaccagatgctaggtgagc  c.277+2160

         .         .         .         .         .         .  g.56494
gaggttaccgtgacacagtgaagcagtgagccgagatcgcgccattgcactccagcctgg  c.277+2220

         .         .         .         .         .         .  g.56554
gcaacggagtgagtgagactgtctcaaacaaaacaaaacaaacaaaaaaaccaacacata  c.277+2280

         .         .         .         .         .         .  g.56614
atctagggtaaatttctgaatagtctgcgggatttttttttaagtccatgtttttttaag  c.277+2340

         .         .         .         .         .         .  g.56674
ttttccaaagtgcttcacttgctcttccagagccttctgtgaattagcttacagagtaga  c.277+2400

         .         .         .         .         .         .  g.56734
gtgggtccacataagccaattgccccattcatggcagatgaagctggaggttgcttggga  c.277+2460

         .         .         .         .         .         .  g.56794
agtattgaagcagggctgtctacggagtcccttctgcaggtcccaaagtgttgggttggg  c.277+2520

         .         .         .         .         .         .  g.56854
acctgcagaggtcccaagggacactgttggagaccagtgtcataggacatcatttgcctt  c.277+2580

         .         .         .         .         .         .  g.56914
tgaattgacgccataccccgcctcgccccttccgcccggccctccgagcaaactcgccac  c.277+2640

         .         .         .         .         .         .  g.56974
ctgtcctctgttgctcggactctgtccaccccacttggcttgtgggcccctcagtggagg  c.277+2700

         .         .         .         .         .         .  g.57034
gactcagaagctcacttcaggttttctgtttgagaagtgctcagtgtgtaggggccacac  c.277+2760

         .         .         .         .         .         .  g.57094
acaggaaagggctgtttgcttgggaccgacacggtctcgcgccagccactcgtgtgggtc  c.277+2820

         .         .         .         .         .         .  g.57154
agcctaagcgctaggggagctggagctgcaccatgccctgtctcggggagcagcagcatc  c.277+2880

         .         .         .         .         .         .  g.57214
tgcgggattctagagacccgtacctgcctggcagttgtagaggtagaagagagggtgcag  c.277+2940

         .         .         .         .         .         .  g.57274
cccaggtggccacggcaaggcctgggctgtggggaactgagtggagcaaaaacagtatct  c.277+3000

         .         .         .         .         .         .  g.57334
gtaagtatctcttggcgagaggggaagcccgcatccaggcagctgtttccccggcatccg  c.277+3060

         .         .         .         .         .         .  g.57394
atcccctgacaaaatccctgagcaggctccccagactccccgaagagctcacacacccct  c.277+3120

         .         .         .         .         .         .  g.57454
cggcaaatcagcagccaagtggccctggatcacgggggtgggggtttggagactgagctg  c.277+3180

         .         .         .         .         .         .  g.57514
agcaggtgactgggagcctccacctgggtgcagtgcccgtccccgcccaggccgcacagg  c.277+3240

         .         .         .         .         .         .  g.57574
cgttgacctctgccctccacccacactggcaccacctggtcctgtatcccccactgggca  c.277+3300

         .         .         .         .         .         .  g.57634
cgaactggcagagtgatctgggtgccagggagacacagccatgaatagaacagatggagc  c.277+3360

         .         .         .         .         .         .  g.57694
ccggcctcctctggcctgggagagcgaggttccctaggccaccctcctcaggggcaccgc  c.277+3420

         .         .         .         .         .         .  g.57754
cctcccttctgtacaggggaagaatcctgttcccattttctgcacttgggggcaggacag  c.277+3480

         .         .         .         .         .         .  g.57814
aggctagaatttcccccctcattcgaagagggttttctagtcttgctgagacccagcagt  c.277+3540

         .         .         .         .         .         .  g.57874
ctgggttctgggatctgtccgaccagggagctcaaccctgagccacggttgctgaccgat  c.277+3600

         .         .         .         .         .         .  g.57934
catgggtgctgggttgtcctggcaccagggagatgaggctgcagggactgaagcccagga  c.277+3660

         .         .         .         .         .         .  g.57994
ctgtgacacaggggctgccagtgaagcggggagggttgggacttccttcccagtggggtc  c.277+3720

         .         .         .         .         .         .  g.58054
ccaggcctcggtcccctgtgtctgcagtgcagacatcgcctcacggtgaggtggcctgag  c.277+3780

         .         .         .         .         .         .  g.58114
accctgaaggcagcgggcctggcttcctcaccaggcggcccgagctctgggatccacgtc  c.277+3840

         .         .         .         .         .         .  g.58174
cccactgggggcccgggatggtgtgctccctgccttgttgacccagcactgcttgtttgt  c.277+3900

         .         .         .         .         .         .  g.58234
aatgacccagatctgagctgtcccctctgaggatgaccaggcgaggcagtgtcccccctg  c.277+3960

         .         .         .         .         .         .  g.58294
gtcacctgacttggggaccagccccacctgagcccacttcctggatcagcacgcatcctc  c.277+4020

         .         .         .         .         .         .  g.58354
ctcctcggctctggtgctgtgggtggggtcctctctattttgtcctctgtaggtgccttt  c.277+4080

         .         .         .         .         .         .  g.58414
tcctccgtacccctcttcagaccaggcctctgagatttgcctcctactcaggacacccag  c.277+4140

         .         .         .         .         .         .  g.58474
ggttgggtggaggccacggctctgcccacacccccctgccccttggccaacaccctgtct  c.277+4200

         .         .         .         .         .         .  g.58534
tcgcctgtggctctcctgcaccctggggcctgggctccagaatcagcctcccttaggcag  c.277+4260

         .         .         .         .         .         .  g.58594
aatgtcctgctgcccctcgctgcccccgccagtaccttcctgccagagagcaagggagca  c.277+4320

         .         .         .         .         .         .  g.58654
gccagttgcgctgggccctgggaccctccacaggattgcgctgagtgctggacgagggtg  c.277+4380

         .         .         .       g.58689
gcagggacggccgaacagggtgccagctgcagggg  c.277+4415

--------------------- middle of intron ---------------------
              g.58690         .         .         .           g.58723
              c.278-4414  caggctgacgtgaggggaagatggaggcagcggt  c.278-4381

.         .         .         .         .         .           g.58783
gggagggtagtgtcctcagcctgggggctttgcagaccctctactcactgagcagatgct  c.278-4321

.         .         .         .         .         .           g.58843
ccccactcccctgtacccccatagagcaggataggggttccctgatggctgagaggaggg  c.278-4261

.         .         .         .         .         .           g.58903
gggtcccatgaaataagatgcggggttcccacctgggaatctacctggtgagactggaga  c.278-4201

.         .         .         .         .         .           g.58963
ccgtctcttcctcactctatcttcgaccccatgggttagtccagcccagggaatgtaaac  c.278-4141

.         .         .         .         .         .           g.59023
ttcacttctggccatgacaaatgcagtaagtttgggtccaggccagaaggttccagaacc  c.278-4081

.         .         .         .         .         .           g.59083
aagttatccctgcaggggctgccagatggcagcttcctctctggagcccctcacctgtcc  c.278-4021

.         .         .         .         .         .           g.59143
caccccaatgtgggactgagagcccttctggtcgggactgaagatggctggtgaaattcc  c.278-3961

.         .         .         .         .         .           g.59203
ttctgcagggctgcctcggtgcccctggatcctgggcctctgccctgggcctgccatgct  c.278-3901

.         .         .         .         .         .           g.59263
ccccttagcccggcccctcctgggctgccagggtccagctgaaacctcagccgcccccca  c.278-3841

.         .         .         .         .         .           g.59323
ggttcctggccccctgtccaaagttagccacaccccgcattcatttcctatcctctgacc  c.278-3781

.         .         .         .         .         .           g.59383
tctttctgccaccctgccccactgccccctgcattatttgcaattattattattattatt  c.278-3721

.         .         .         .         .         .           g.59443
attgagacagagtctcactctgtcgcccaggctggagtgcagtggtgtaatcttggctca  c.278-3661

.         .         .         .         .         .           g.59503
cggcaacctctgcctcccaggttcaagcgattctcctgcctcagccccccgagtagttgg  c.278-3601

.         .         .         .         .         .           g.59563
gattacaggtgtgtgccaccacacccggctaattttttttatatttttggcagagacagg  c.278-3541

.         .         .         .         .         .           g.59623
gattcaccatgttggccaggctggtgtggaactcctgacctcaagtgatcctcctgcctt  c.278-3481

.         .         .         .         .         .           g.59683
ggcctcccaaagtgctgggattacaggcatgaaccacctcgcccagcctgcaattattta  c.278-3421

.         .         .         .         .         .           g.59743
actaactggtttggtttgatgatttctgtttgtatcgtgggagtatcactttctgaggtc  c.278-3361

.         .         .         .         .         .           g.59803
agggaccatatctgtcctttgactgtgtcaccccagcgcctggcaccaatcactgtttat  c.278-3301

.         .         .         .         .         .           g.59863
taggggatcagtcactgtttattgatcacgtgatccactgtagtgagcaatcggtatgct  c.278-3241

.         .         .         .         .         .           g.59923
tagtaactgtcggctcagtatgatttagtttcaacacaaatgcatttattgtactcctac  c.278-3181

.         .         .         .         .         .           g.59983
tgcatacctaaaatgctctagtgcctttggacttcagcagaagtaaaagtgaaaagctct  c.278-3121

.         .         .         .         .         .           g.60043
ggccgggcggggtggctcacacctgtaatcccagcactttgggaggccaaggcaggcgga  c.278-3061

.         .         .         .         .         .           g.60103
tcacgaggtcaggagatcgagaccatcctggctaacacggtgaaaccccatccctactaa  c.278-3001

.         .         .         .         .         .           g.60163
aaatacaaaaaaattagccaggcttggtggcgggtgcctgtagtcccagctactcgggag  c.278-2941

.         .         .         .         .         .           g.60223
gctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagctgagatcacg  c.278-2881

.         .         .         .         .         .           g.60283
ccactgcactccagcctgggcaacagagtgagactctgtcttaaaaaaaaaaaaatgaaa  c.278-2821

.         .         .         .         .         .           g.60343
agctctgagggagtccggagcccacccctcaactgtgacttttcttggagaaatgaaaca  c.278-2761

.         .         .         .         .         .           g.60403
tgaagtgttcgacagccgattccctcctcccagagtgcccggacagcgtagattataaag  c.278-2701

.         .         .         .         .         .           g.60463
tatcagcgtcccagctcatgtcatgactcgaatgggccatctcacagtgacaataaatcc  c.278-2641

.         .         .         .         .         .           g.60523
attgttattttgccaggagagagattaatgttaaacataatttatcctttcgggttttat  c.278-2581

.         .         .         .         .         .           g.60583
ctgagctgagaaaatttgttaccatagagatttcaaaacttgagaaacggcattttaatg  c.278-2521

.         .         .         .         .         .           g.60643
agctgcggagatgggggttcgtgggcctagcggtgccttgtgccggagacatgagtgtgc  c.278-2461

.         .         .         .         .         .           g.60703
gcaactcgttctttgatcttttaagacggaagaatgactctggcactcagggtggcggtg  c.278-2401

.         .         .         .         .         .           g.60763
gggtggggacgggagccaggtggccctttgcaatgagagtgagggagtggactcagatgg  c.278-2341

.         .         .         .         .         .           g.60823
tgactgtgccatctgccctgggtgtggacggggacctgagtgcttcaggtgagaccccac  c.278-2281

.         .         .         .         .         .           g.60883
ctggccctcagtgccccatgcactcccagggatcacgtggggctgccatggtcctgctgg  c.278-2221

.         .         .         .         .         .           g.60943
cagccttgccatatggggtccctacggtgggtgggcatggcaggtcccactcccttgcca  c.278-2161

.         .         .         .         .         .           g.61003
taggtgggaccagctaaggctgtcatctccagagtcccccgcccacatcccctcatgtgg  c.278-2101

.         .         .         .         .         .           g.61063
aaggatgatgcaaagccataatcgcagcagtttgggaggccaaggcgggtggatcacctg  c.278-2041

.         .         .         .         .         .           g.61123
aggtcaggagttcgagaccagcctgaccaacatggtgaaaccccgtctctaccaaaaata  c.278-1981

.         .         .         .         .         .           g.61183
caaaaattaatcaggcgtggtggtgtggacctgtagtcccagctacttgggaggctgagg  c.278-1921

.         .         .         .         .         .           g.61243
caagagaattacttgaacctgggaggtggaggttgcagtgagccgagatctcaccactgc  c.278-1861

.         .         .         .         .         .           g.61303
actccaacctgggcgacagaacgagactctatctcaaaaaaaccccacaaaaaaacccaa  c.278-1801

.         .         .         .         .         .           g.61363
aaaaacaaagctgatggcttgtgtctagacatgggagtcctgagccagttcctccgtgaa  c.278-1741

.         .         .         .         .         .           g.61423
acctgcctttcccagatggccacactgactgtcatcacccccacctggggctgtccccag  c.278-1681

.         .         .         .         .         .           g.61483
ctttgggggcaggtgccttggccaggcccacctggggcccagtctcctgtgggaacagct  c.278-1621

.         .         .         .         .         .           g.61543
gagtcatggcttggagctggtcaacacagggtgcccggccacagctgggcagccctgttc  c.278-1561

.         .         .         .         .         .           g.61603
cctgtcagtgccttagtgagagattcgtgactgcaggatgagcctgctgctgtggcagct  c.278-1501

.         .         .         .         .         .           g.61663
tccagcgctcacgcaggctctgggttggcctgtgggggccttggagggtttgcctggagt  c.278-1441

.         .         .         .         .         .           g.61723
agtggcccctcattttgcagaacctcaggagatctccctgcagcaccttacagaggatgc  c.278-1381

.         .         .         .         .         .           g.61783
agaggctgtgacaggcagcattctcctcccccttggaagcctcaggatgctgtgggacga  c.278-1321

.         .         .         .         .         .           g.61843
gggggccttcagcgtccccttcctcccagtgttgtacctgcagctgtgctggagtgacca  c.278-1261

.         .         .         .         .         .           g.61903
ggggcagaggtggtgacgctgctgcccgccttgccacaatttcgccagcagagggtgctc  c.278-1201

.         .         .         .         .         .           g.61963
atggatagccgccttgcaggcgctgctgccgcagatccagactctgctgccccatggggt  c.278-1141

.         .         .         .         .         .           g.62023
caggggcctctgggccacctggttagcctttgttcccacttctaaagaaggggtgggtct  c.278-1081

.         .         .         .         .         .           g.62083
ggtaatggattcacgatggctcaagcccacccaccagatcccagccctccgtagtggtgc  c.278-1021

.         .         .         .         .         .           g.62143
tgcttgtggggcggctccagcagcaggtcctgggccccccttccttggcatgtccctgtt  c.278-961

.         .         .         .         .         .           g.62203
gacaccctcctgggacaccgctccttctggcccgttctgagcagcccacagccttaggcc  c.278-901

.         .         .         .         .         .           g.62263
cagcacttttggctggcccaccggcatcaactagccacaggccctccatcagccccaggc  c.278-841

.         .         .         .         .         .           g.62323
tcttggcagaactgcaggtggcccagggtgagagcatcgctgcctttgccaccaggatcg  c.278-781

.         .         .         .         .         .           g.62383
atggacaggaggggctggggctcccggtcatgcccacggatgaggggcagatatgtggag  c.278-721

.         .         .         .         .         .           g.62443
tgggcttaggtgcttgtggccgggccagcctgggtctgccttttaatgacctcaaattgc  c.278-661

.         .         .         .         .         .           g.62503
tcctggcatgtgttgtaagaggtaattcctcccgttaacatactagggatatattttttt  c.278-601

.         .         .         .         .         .           g.62563
ctaattttaaatttggattaaattcttttgatgaatttccactttttctctgttttgcgt  c.278-541

.         .         .         .         .         .           g.62623
atcaaccaggaaatgtcacaaagtacaattctagtggcggttcgaggctgttgcttccct  c.278-481

.         .         .         .         .         .           g.62683
tctcccttcctctctctgcttcctccctccgtctctctccctccctccccctccctccct  c.278-421

.         .         .         .         .         .           g.62743
cccttccttgcatgctgagtggtgtgacctcatggagcgtactaagacacctcagaagca  c.278-361

.         .         .         .         .         .           g.62803
gcctccatccagaggcagctcacagcctgagaggttctcctgagggtcaacacacagatg  c.278-301

.         .         .         .         .         .           g.62863
tgttaggcgcaggagctgagggcagggtgttgagggctcccagctggaaggaccagttgt  c.278-241

.         .         .         .         .         .           g.62923
gtttcatggaggagtttgcatttgcactgagtcttgaagggggcaggtttggccaagtgg  c.278-181

.         .         .         .         .         .           g.62983
gagcagggaagggctgcaggagcagtttgatcaaggggcagatgtgcagcagatggcagt  c.278-121

.         .         .         .         .         .           g.63043
gccccacgacgggcagcacagcttcccagggtcccgggctggcttgtttgcagagagcca  c.278-61

.         .         .         .         .         .           g.63103
tggctgggtgtggttgcaggggctccccgactgccttctcacctctgtgctctgttccag  c.278-1


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