collagen, type IX, alpha 1 (COL9A1) - 3835 nt intron 20 reference sequence

(intronic numbering for coding DNA Reference Sequence)


         .         .         .         .         .         .  g.47487
gtaagatggtgatgacaataatataataccaaaatgtgttaaatatttaaaattttggcc  c.1449+60

         .         .         .         .         .         .  g.47547
gtttaaacataactttttatcttcaacaacttttttttttttttttttgagatggagttt  c.1449+120

         .         .         .         .         .         .  g.47607
cactcttgttgcccaggctggagtgcaatggcgcgatcttggctcactgcaacctctgcc  c.1449+180

         .         .         .         .         .         .  g.47667
tcctgggttcaagcgattctcctgtctcagcatcacgagtagagcagctgggattacagg  c.1449+240

         .         .         .         .         .         .  g.47727
cgcctgccaccacgcccggctaatttttgtattttttagtagagacggggtttcaccatg  c.1449+300

         .         .         .         .         .         .  g.47787
ttggccaggcaggtcctgaactccggacctcaggtaatccacctggctcggcctcccaaa  c.1449+360

         .         .         .         .         .         .  g.47847
gtactgggattacaggtgtgagccaccgcgcccagcctaacaacatgatattttatgatg  c.1449+420

         .         .         .         .         .         .  g.47907
ctttgtagatgtgtgattaggttttcacaattctgttgtaagcacagataataggaatga  c.1449+480

         .         .         .         .         .         .  g.47967
gcagtatgcatgatatttgccatgtcttaatttattttaaattatattgagtaaatcaga  c.1449+540

         .         .         .         .         .         .  g.48027
gtaaacaaggttgttacattttaactcattgtcatgatcagtggttagctttgataacac  c.1449+600

         .         .         .         .         .         .  g.48087
tggcacagtgcctggagcgcttctggtcaggcaaggcaaagacagggaggatggaaaagg  c.1449+660

         .         .         .         .         .         .  g.48147
agaggtaagccaaggcaggacatccccaaagacactggagcctccagtgacccacctgca  c.1449+720

         .         .         .         .         .         .  g.48207
agctgatccatgagccctgcccttagcatgggttatacacttatggctggaggacactag  c.1449+780

         .         .         .         .         .         .  g.48267
cctgcccttagcccagtctcagaaaccagattcccccagcacttccataccaaggcactc  c.1449+840

         .         .         .         .         .         .  g.48327
cgcaggctgctggggagattccaaggggaataagacctttatcaagtcagttatttattg  c.1449+900

         .         .         .         .         .         .  g.48387
ggcaagacaaataagtagttagttaactacaatgcaagcaaaagagacatgaatctgaga  c.1449+960

         .         .         .         .         .         .  g.48447
gccagtggtatgatggagtggagcggaagcagggctaatcttgatagggaaactgagagg  c.1449+1020

         .         .         .         .         .         .  g.48507
gcccatgaaggaggtggcattagaaggatgtggagcctggaaggatgaggtgttgccgtt  c.1449+1080

         .         .         .         .         .         .  g.48567
ggtggaggatgaaggacaggctatgtttagctgagtgattatcatcacagcatcatcatg  c.1449+1140

         .         .         .         .         .         .  g.48627
atgcgttcagaagtgttttccttggcgtgtgtgtagggtgtgtaggggtgtgtttagcct  c.1449+1200

         .         .         .         .         .         .  g.48687
ctctatcagattttaagaaaatggttaccacttcttggatgttaggaaagttaatttata  c.1449+1260

         .         .         .         .         .         .  g.48747
ggctccagaaaatacaaaaggcatctttgcccactgtcacttctgaccctgacctcattc  c.1449+1320

         .         .         .         .         .         .  g.48807
tctttataacttctatggttaattggtgtcagttcccccagcagcacagagccttttatt  c.1449+1380

         .         .         .         .         .         .  g.48867
aacagttaattaacaatacgttgtacgttgtacatgctcaataaatgaaattaaattttt  c.1449+1440

         .         .         .         .         .         .  g.48927
ctttttaaaaaagagatgcacagcttggtgaatgaaggatgaagcttatttatcattttt  c.1449+1500

         .         .         .         .         .         .  g.48987
ttgtcaatttaatgttttttttccaggctgtttgtcacttctaggtattttcattctgct  c.1449+1560

         .         .         .         .         .         .  g.49047
tgctttccttatccatcttttcaatcaatatttcttttctgaaaactttgtatttgttaa  c.1449+1620

         .         .         .         .         .         .  g.49107
acatattagatgcattcatatttctatatttatgtcaccttaagtaacattcactgtgtg  c.1449+1680

         .         .         .         .         .         .  g.49167
tcttttcttttatcagacaatagatcccatttattttcaagttgctgataccttcatttt  c.1449+1740

         .         .         .         .         .         .  g.49227
tttctggatttaaatcatcccctagaatatgtgacccctcactttgaaaccaattactgt  c.1449+1800

         .         .         .         .         .         .  g.49287
tcttgatatggtcttcatttgagatatttttccatttggtatttttcaaaacttctcatt  c.1449+1860

         .         .         .         .         .          g.49345
tcctctaagttctgtcaaattgctttaaaaaagaaagaaaaaaaagctcttcttgtga  c.1449+1918

--------------------- middle of intron ---------------------
          .         .         .         .         .           g.49402
   actcagacccatggagtggttacctagtaacagcagtttgggtctaagctcatgctg  c.1450-1861

.         .         .         .         .         .           g.49462
aacagcaataagagagagagagagagtgcatcaaagccacgtctataatgcaaaggctgg  c.1450-1801

.         .         .         .         .         .           g.49522
gttctgctcttgtaatgcaaggtgaatgataaattcaaggtctttttcaggtcttcaaaa  c.1450-1741

.         .         .         .         .         .           g.49582
tctcttcttctctggtgagtgtagaatgctttttgctctgtcctactttttagggatcaa  c.1450-1681

.         .         .         .         .         .           g.49642
agaatttcagggctctctggtacctctgcttcagttgagttccttctttgattctaccta  c.1450-1621

.         .         .         .         .         .           g.49702
tgtctgaaccttctatcatggattttctaatttttaattcttactacacatgccgtccac  c.1450-1561

.         .         .         .         .         .           g.49762
ctggttttcttgatttgacacttgattcaaatttgacatttgatttcttggcctgacatc  c.1450-1501

.         .         .         .         .         .           g.49822
tatccagtactcttgattgtttttcatttattttatcatcttctcatctcaacttggttc  c.1450-1441

.         .         .         .         .         .           g.49882
attagaaggctgcctcattatgcctttttattcacttagtagataagaaaaataaagata  c.1450-1381

.         .         .         .         .         .           g.49942
ggggttatattttgtcagatagcatatgtagagagcactaaaaacactttttaagatctt  c.1450-1321

.         .         .         .         .         .           g.50002
aatatcacattttgattctcatgatgaaaataaagaggtgatagtgtacaatatgttagc  c.1450-1261

.         .         .         .         .         .           g.50062
cacatcagagattatttcaagataattagatttataaagctctgagtcattcttatgtca  c.1450-1201

.         .         .         .         .         .           g.50122
tcacttggtagactggatctgctcttgagaaaataggccggttactttatataaattgaa  c.1450-1141

.         .         .         .         .         .           g.50182
cctaatatctgtccaggatggaagagggtatgctcaggtccttccagtaattcattcttc  c.1450-1081

.         .         .         .         .         .           g.50242
tgaatcatgtggctggacttcttattccagatcttgatgggagatccagagtcccagaaa  c.1450-1021

.         .         .         .         .         .           g.50302
tccctctcacagttgtggcagcaacagagtatagcagctgttcttagagtggctccatgg  c.1450-961

.         .         .         .         .         .           g.50362
ccttcatcgttaataaattttttgtgtgtgtttttgagacagggtctcacactgtcgccc  c.1450-901

.         .         .         .         .         .           g.50422
atgctggagtgcagtggtgctctctccactcaacgcaatctcctcctctcgggcccaagt  c.1450-841

.         .         .         .         .         .           g.50482
gattctcttgctctagcctcctgagtagctgggattacaggcatgtgccaacagacccgg  c.1450-781

.         .         .         .         .         .           g.50542
ctaatttttgtatttttgtagagactgggtttctccatgttggccaggctgtctggaact  c.1450-721

.         .         .         .         .         .           g.50602
cctggtctcatgtgatccccccacctggcggttaattaatttctatagaaatgttaagaa  c.1450-661

.         .         .         .         .         .           g.50662
ccctggagagtggctaccaaacttcttctaatagatttaccaatctattaataagcacct  c.1450-601

.         .         .         .         .         .           g.50722
gtgtttttagctcatgtcagcaactgaggatgggtgcagtgttaacttaaaacatacaga  c.1450-541

.         .         .         .         .         .           g.50782
ctgggctgggtgcagtggctcacgcctgtaatctcagcactttgggaggccaaggtgggc  c.1450-481

.         .         .         .         .         .           g.50842
agatcatgaggtcaagagattgggaccatcctggccaacatggtgaaatcccatctctac  c.1450-421

.         .         .         .         .         .           g.50902
taaaaatacaaaaattagctgggcatgacggcgtgcgcctgtagtcccagctactcagga  c.1450-361

.         .         .         .         .         .           g.50962
ggctgaagcaggagaattgcttgaacccagggggcggaggttgcagtgagccaagatggc  c.1450-301

.         .         .         .         .         .           g.51022
gccactgcactccagcctgggcaacaagagcgaaaccctgtctacaaaaaaaaaaaaaaa  c.1450-241

.         .         .         .         .         .           g.51082
aaaaaaaaaaaaattacagagtggcatcaaagattgtgtttaagtacaattggtatgctg  c.1450-181

.         .         .         .         .         .           g.51142
agtagatgtaaacaagtttacctgaggtgcctgagtaattactcctcagggatcactgtg  c.1450-121

.         .         .         .         .         .           g.51202
tgtattacaggcacaaaacctccttttcatctggctattaaatttctttagaaagatgga  c.1450-61

.         .         .         .         .         .           g.51262
tgcttcctttaacatacatgactgatctcagtttttttccattgtcttgtttttttgcag  c.1450-1


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