CCCTC-binding factor (zinc finger protein) (CTCF) - 8423 nt intron 01 reference sequence

(intronic numbering for coding DNA Reference Sequence)


         .         .         .         .         .         .  g.5378
gtaagggggcccggggtggaggaggtttcgcgggccgcctctaggtgtcacgatggggcc  c.-127+60

         .         .         .         .         .         .  g.5438
gctccggtcggcgctggctgcagcccggcgccagcgccgccgccggggggtgtttgtctc  c.-127+120

         .         .         .         .         .         .  g.5498
cctctaccgtccctgctgcggcgcggccgccgccattgcccgtcgccgccgtggcccggc  c.-127+180

         .         .         .         .         .         .  g.5558
cgccccccccacccccacgcccgcccgcccgcccgcccgctaggcctccctcctggcagc  c.-127+240

         .         .         .         .         .         .  g.5618
gcgctaggcctcgggcggcggcagaggcagaggcccgcgcgcccggcgactccattttcc  c.-127+300

         .         .         .         .         .         .  g.5678
ttcctttgtctgccctcgaggccggttcttggccggccgatcgcccggccgcggcccgcc  c.-127+360

         .         .         .         .         .         .  g.5738
ctctgtcctgtgtcctccgcccctcccgcggcgggtggccccagctgagacactatctcc  c.-127+420

         .         .         .         .         .         .  g.5798
gcgtcccggcttcggcgcccgcctagcttaagggttcggaccgactgccgccgcgcgcta  c.-127+480

         .         .         .         .         .         .  g.5858
agccaggtcccggtgccgtatgggtgtcgggccctggccgtcgcgtctcgggctgcccct  c.-127+540

         .         .         .         .         .         .  g.5918
cctccagccagccccgtccccggaacctaccctgccggcctgcgtgccttcccagctgct  c.-127+600

         .         .         .         .         .         .  g.5978
tggctgctcggcggtcgctcccagtccgcgcgtcgccgccgctggtctccgtctccgccg  c.-127+660

         .         .         .         .         .         .  g.6038
agtggcgcaggcggcgctgcagcggctgcgagcagagggaccccagagctgccgagagct  c.-127+720

         .         .         .         .         .         .  g.6098
ccctctgcaaggctggctgagctgctcgcacctctacgctgcctgagcgggcggggggac  c.-127+780

         .         .         .         .         .         .  g.6158
gcgcgctcgccgcccccgctgcgcccccaaactcgcgcccgggttcctggccggacccga  c.-127+840

         .         .         .         .         .         .  g.6218
ccggtgcggcccccccacggtgggcggaaaagatgcgagttccgcaccaagtagttttta  c.-127+900

         .         .         .         .         .         .  g.6278
tccagccgggttcggactccccagccgagtgatagcagcctgactttgtgcgctcagaga  c.-127+960

         .         .         .         .         .         .  g.6338
tctcaaagggactgaaacttaaatttcattctgatctcaagtgacgtgacaaatttctga  c.-127+1020

         .         .         .         .         .         .  g.6398
atttgggagtatgggctaagtcccttgagtttccctcccgctttaaaatgtcctcacact  c.-127+1080

         .         .         .         .         .         .  g.6458
aacttagtacctgatgctctagggctaggtgaaggcggttctgccccaggattgtgcaac  c.-127+1140

         .         .         .         .         .         .  g.6518
tcgatctagagcgccagtagggcagaatgagtttattcttgactcgactggtaatttgcc  c.-127+1200

         .         .         .         .         .         .  g.6578
catgcgatgaaatatgagggttgatgttgtaattgaatcctgggtcacttgctgcagatg  c.-127+1260

         .         .         .         .         .         .  g.6638
gtttataaatatctacgcctaatgtaactactgtttagtaggagacttcctgtagccccg  c.-127+1320

         .         .         .         .         .         .  g.6698
agttcagcgttaagtaaacattcgcatacgtagtcttcatactttgagtttcgatcaact  c.-127+1380

         .         .         .         .         .         .  g.6758
aggaaagttaaaaaccaagtcctcataggtgggaaaggaagttaaacaaggcatatattt  c.-127+1440

         .         .         .         .         .         .  g.6818
aaatttattcggtccttaagttttctttcttcactaaaaagcatcccgttgaattgcggg  c.-127+1500

         .         .         .         .         .         .  g.6878
agtcttttgcttttccgtaaatattctagtgccttaatatagttcattgcagcagttaat  c.-127+1560

         .         .         .         .         .         .  g.6938
gtatcagttcgggttgttttggagagaagaaagtctggattaacctgtttttaggaagga  c.-127+1620

         .         .         .         .         .         .  g.6998
agctatgttaagtttatgaagaaattaaacagcctggtcctaaccaaagttgtccagtcc  c.-127+1680

         .         .         .         .         .         .  g.7058
actgtatgtaatctcaatgtgtagctcctcactgcagtcctcttcgtaggcacgctttct  c.-127+1740

         .         .         .         .         .         .  g.7118
atgtctccttttggaaccctgcaaaatattcctgccacccctcttcctcaataaaattgc  c.-127+1800

         .         .         .         .         .         .  g.7178
atagagtaactaaatgcagtagcgttgattgatagttagacttgggaatagaatcacctt  c.-127+1860

         .         .         .         .         .         .  g.7238
taattatctaatatgttagtccaattgtgtaatttattgcattcttttgtgactttgttt  c.-127+1920

         .         .         .         .         .         .  g.7298
tccttttgaaattgtggttaagtagcatgttttatttatttaaataagctcaacattgag  c.-127+1980

         .         .         .         .         .         .  g.7358
ttaaaaattaaaatacagcaggtgtataatcgagccaggagtaaagcttgttttcccggg  c.-127+2040

         .         .         .         .         .         .  g.7418
ttagtactgtgctccatagaccatattttgcttcttggtttggttgtttcatatgcagtc  c.-127+2100

         .         .         .         .         .         .  g.7478
atcagcttcttgggtttatacgtcatttatgctgttttagtggaatagaccttttccaca  c.-127+2160

         .         .         .         .         .         .  g.7538
cagttgctatcctttgaaattcccatatgccaggaatcatgctttgttttgtttttatta  c.-127+2220

         .         .         .         .         .         .  g.7598
aaaaacaatctacggagagaataaattgaggatgaattgatatgttagggtaacccagac  c.-127+2280

         .         .         .         .         .         .  g.7658
ctttttttttttttgagacggagtctcgttctgtcccctaggctggagtggcagtggtgc  c.-127+2340

         .         .         .         .         .         .  g.7718
gatctcggctcactgcaacctctgcctcccggattcaagcaattctcctgtctctgcctc  c.-127+2400

         .         .         .         .         .         .  g.7778
ccaagtagcaggaattacaggcccgtgccaccacgcccggctaatttttgtatttttagt  c.-127+2460

         .         .         .         .         .         .  g.7838
agagacgggttttcacgatgttggccaggctggtctcgaactcctgacctcaggtgatcc  c.-127+2520

         .         .         .         .         .         .  g.7898
acccgcctcagcctcccagagtgctgggattacaggcgtgagccatctcgccaggccagg  c.-127+2580

         .         .         .         .         .         .  g.7958
acctgttatttaaattagtgataggaggatgattaaaacaggaatgtttgcctgcataag  c.-127+2640

         .         .         .         .         .         .  g.8018
aaaatactgcctatttaagagtagttgtggctgggagcggtggctcacgcctgtaatccc  c.-127+2700

         .         .         .         .         .         .  g.8078
agcactttgggtgaccaaggcgggagaatcacgaggtcaggagattgagaccatcctgac  c.-127+2760

         .         .         .         .         .         .  g.8138
taacacagtgaaaccctgtctctactaaaaatacaaaaaattagccaggcatggtggcac  c.-127+2820

         .         .         .         .         .         .  g.8198
acgccgtagtcctggctactagggaggctgagacaggagaaccgctcgaacctagaaggt  c.-127+2880

         .         .         .         .         .         .  g.8258
ggaggttgcagtgagccgagattgtgctgctgcactccagcctgggcaacagagcaagac  c.-127+2940

         .         .         .         .         .         .  g.8318
tcttatctcaaaaaaaaaaaaaaaaaaaaagagtagttgtaaaggttaactttatcggga  c.-127+3000

         .         .         .         .         .         .  g.8378
tccattcaacctatgtaagaatttaagaggtgaagttgtccttaagatgcattcaaattc  c.-127+3060

         .         .         .         .         .         .  g.8438
taagagctttaggattttattttaaagtacacacgcaaatgggggcactcacctgggact  c.-127+3120

         .         .         .         .         .         .  g.8498
tctgaatggcttggggagttccttggtggaagccacttgtggctgacttaaggccctggg  c.-127+3180

         .         .         .         .         .         .  g.8558
gaggaatcctgggcagagccttgcaggctggtgcctcctggccaaaagtcacctctagag  c.-127+3240

         .         .         .         .         .         .  g.8618
actgctttttttgcttcagggatgctgctgctgtcacagccattccacatcatctacgtt  c.-127+3300

         .         .         .         .         .         .  g.8678
atagactccacctaatttttttaaactagaccatctgtctgcctaatttacctgtcttgg  c.-127+3360

         .         .         .         .         .         .  g.8738
ctccagatgacttgactgttttgccaaaaattaggcccctcttcaaacaactcagatgca  c.-127+3420

         .         .         .         .         .         .  g.8798
ttatgatttaaaaagaacaataatggcaaataatgtgtaactttgaagaccatggttctc  c.-127+3480

         .         .         .         .         .         .  g.8858
aattgatgtgatttgtaggtgggacatggtggctcacacctgtaatcccagcactttggg  c.-127+3540

         .         .         .         .         .         .  g.8918
aggctgaggcgggcggatcacctgaggtcaggagtttgagaccagcctggccaacatggt  c.-127+3600

         .         .         .         .         .         .  g.8978
gagaccccatctttaccaaaaacacaaaaattagctgagcgtggtggcatatgtctgttt  c.-127+3660

         .         .         .         .         .         .  g.9038
ctgtaatcccagctactcaggaggctgagtcaggagaatcacttgaacccgggaggcgga  c.-127+3720

         .         .         .         .         .         .  g.9098
ggttgcagtgagtcaagatcgtgccgttgcactccagcctgggtgacagagtgagacttt  c.-127+3780

         .         .         .         .         .         .  g.9158
gtctcaaaattaaaaaaaaaaaaaaaaaaaaaaaaagattagtcttaccacatttgtttt  c.-127+3840

         .         .         .         .         .         .  g.9218
gttgttcttgtggggtatttgtttgttttggagatggagtctcgctttgtctaccaggct  c.-127+3900

         .         .         .         .         .         .  g.9278
ggagtgcaggggcacgatctcggctcactgcaagctctacctcccaggttcacgccattc  c.-127+3960

         .         .         .         .         .         .  g.9338
tcctgcctcagcctcccgagtagctgggaggactacaggcgcctgccaccacgcctggct  c.-127+4020

         .         .         .         .         .         .  g.9398
aattttttgtatttttagtagagacggggtttcaccgtgttagcaaggatggtttcgatc  c.-127+4080

         .         .         .         .         .         .  g.9458
tcctgacctgcccgcctccgcctctcaaagtgctgggattacaggcgtgagccaccgtgc  c.-127+4140

         .         .         .         .         .         .  g.9518
ccggcctgtggggtttgtttgtttgttttaagacagggtctttctcttttacccaggctg  c.-127+4200

         .    g.9530
gagtgcagtggt  c.-127+4212

--------------------- middle of intron ---------------------
                                    g.9531        .           g.9541
                                    c.-126-4211  gtgatcacagc  c.-126-4201

.         .         .         .         .         .           g.9601
tcactgcagcctccacctccctggctcaaatgatcctgccacctcagcctcctgggtagc  c.-126-4141

.         .         .         .         .         .           g.9661
tgggactaattttttctaggtatggggttttgtcatgttgcctaggctggtctcaaactc  c.-126-4081

.         .         .         .         .         .           g.9721
gtggcctcaagcagtctgtctgccttggcctcccaaagtgctgggattaggtgtgagcca  c.-126-4021

.         .         .         .         .         .           g.9781
ccgtgtccagcccattttttttaaacacctgtaaactttctgtagtctgtcttcgtatct  c.-126-3961

.         .         .         .         .         .           g.9841
ttcctgctagtatctttgtgcattttctcagtgatttaatatttgaatgcaaagttgtgg  c.-126-3901

.         .         .         .         .         .           g.9901
cattgcatatagactgccaaaatacagtccaaaggtgagggttaggatggtattctttca  c.-126-3841

.         .         .         .         .         .           g.9961
cacttgatccttgtttttggtcactcttggaattttcaggggtagaaaatttcattccct  c.-126-3781

.         .         .         .         .         .           g.10021
ttgaggtatgctggtaataataatggactccagtatggaagtgttggttggactaaatat  c.-126-3721

.         .         .         .         .         .           g.10081
gctaatcacctatttgtgttactaaaaattgcctctcaacagaggagactttagcttcat  c.-126-3661

.         .         .         .         .         .           g.10141
ctaagtattagtgagttttgtggagtttagctaattgtgagatggatttcctcttagaag  c.-126-3601

.         .         .         .         .         .           g.10201
atgtacctcatgtgccaaattgcttggaaactttttttttttaatacattttgattgagg  c.-126-3541

.         .         .         .         .         .           g.10261
cagtggcatgatcatagctgttgcccagataggagtgcagtggcatgatcatagctcact  c.-126-3481

.         .         .         .         .         .           g.10321
gcagccttgaactcctgggctcaagcagtcttcctgctgcagcctcccaagtagctggta  c.-126-3421

.         .         .         .         .         .           g.10381
ctataggcgtgtgccaccatgcccagctgattcttttatttttttgtagagacaggatcc  c.-126-3361

.         .         .         .         .         .           g.10441
tactatgttgctcaggctggtcttgaactcctgggctcaagcaagtctcccacctcggcc  c.-126-3301

.         .         .         .         .         .           g.10501
tcccaaagtgttgacgttacaggtgtgagccaccatactcggcttttttttttttttttt  c.-126-3241

.         .         .         .         .         .           g.10561
ttttttttgagacaggttgtcactgtgttgcccacactgcagtgcagtggtgtgatcatg  c.-126-3181

.         .         .         .         .         .           g.10621
gctcactgcagccttgtcccccacctgccccaagcgatcctcccacctcagccttccaag  c.-126-3121

.         .         .         .         .         .           g.10681
tagctgggaccacaggcacacaacaccatgcctggcatatatatgtatacgtgtatatat  c.-126-3061

.         .         .         .         .         .           g.10741
atatattttttaagatggagttcactctgtctcccaggctggagtgcagtggcatgttct  c.-126-3001

.         .         .         .         .         .           g.10801
gggctcactgcaaccccggcctcccaggttcaagtgattctcctgcttcagcctcgggag  c.-126-2941

.         .         .         .         .         .           g.10861
tagttgggattacaggtgcctgccaccgtgccgagctaatttttgtatttttagtagaga  c.-126-2881

.         .         .         .         .         .           g.10921
cggggtttcaccatgttggccaggctggtctggaactcatgacctcaggttatccaccca  c.-126-2821

.         .         .         .         .         .           g.10981
cctcgacctcccaaagtgctgggactacagacgtgagccaccatgcctggcctttttttt  c.-126-2761

.         .         .         .         .         .           g.11041
gttgttgttcttcttccctgagacgaagtcttcctctgtcacccaggctggagtgcagtg  c.-126-2701

.         .         .         .         .         .           g.11101
gtgcgatggtggcccactgcaacctccgtctcccgggttcaaccagttctcctgcctcag  c.-126-2641

.         .         .         .         .         .           g.11161
cctcctgagaagctgggattacaggtgcataccaccatgcccagctagtttttgtatttt  c.-126-2581

.         .         .         .         .         .           g.11221
tagtagagactgggtttcaccacgttggccagggtggtctcgaactctaacctcatgatc  c.-126-2521

.         .         .         .         .         .           g.11281
cacccgcctgggcctcctaaagtgctgggattacaggcgttagccactgtgcccggcctg  c.-126-2461

.         .         .         .         .         .           g.11341
cctggctaatttttatgtattttgtagagacggggttttgccatgttgccctgactggct  c.-126-2401

.         .         .         .         .         .           g.11401
ttgaactcctaggctcgagcagtcctctgctgtggcctctcaaagtgctggattgctggt  c.-126-2341

.         .         .         .         .         .           g.11461
gtgagccatcacacctggctatattatttggaaactctttttttttttgagactgagtct  c.-126-2281

.         .         .         .         .         .           g.11521
tgctctgttgcccaggctggagtgcagtggtgtgatcttggctcactgaaacctctgctt  c.-126-2221

.         .         .         .         .         .           g.11581
cctgggttcaagcgattctcctgccccagcctcctgaatagctgggataactggcacaca  c.-126-2161

.         .         .         .         .         .           g.11641
ccactacgcctggttaatttttgtattttttttagtagagacaaggttccactatgttgg  c.-126-2101

.         .         .         .         .         .           g.11701
tcaggctggtcttgaactcctgaccttgtgatccgcctgccttggcttcccaaagtgctg  c.-126-2041

.         .         .         .         .         .           g.11761
ggattacaggcgtgaaccactgtgcctggcctatttggaaacacttagttcaaatttagc  c.-126-1981

.         .         .         .         .         .           g.11821
tctttatttcatttgggattttattttattctttttttgagacagagtctcactctgtcg  c.-126-1921

.         .         .         .         .         .           g.11881
ccaggctggagtgcagtggcacgatcttggctcattgcagctccgcctcctgggttcaaa  c.-126-1861

.         .         .         .         .         .           g.11941
cgattctcctgcctcagcctcctgagtagctgggtttacaggcctgcaccaccatgccca  c.-126-1801

.         .         .         .         .         .           g.12001
gctaatttttgtatttttagtagagacggggtttcactatgttggccaggatggtctcaa  c.-126-1741

.         .         .         .         .         .           g.12061
tctcttgacctcgtgatccgcccgctttggcctcccaaagtgctgggattacaggtgtga  c.-126-1681

.         .         .         .         .         .           g.12121
gccattgtgcctggcctgggattttctttctttctttctttctttttctttagaggtagg  c.-126-1621

.         .         .         .         .         .           g.12181
ttccactctacctttgcttgaagcttgacagttcattttgtaatttagggtgaaaagatg  c.-126-1561

.         .         .         .         .         .           g.12241
ccatctaacaaagtattccgttattcgactaaaaaaactgtttcattgctatgcttctag  c.-126-1501

.         .         .         .         .         .           g.12301
gattttcaaaggtcagtaaaagctccttttgccagttatctttttttttttttaatgaga  c.-126-1441

.         .         .         .         .         .           g.12361
cggagtctagctctgtcgcccaggctggagtgcagtggcgcgatctcggctcattccaac  c.-126-1381

.         .         .         .         .         .           g.12421
ctccggctcctgggttcaggcgattctcctgcctcagcctcctgaatagctgggattaca  c.-126-1321

.         .         .         .         .         .           g.12481
ggcgtgtgccaccacgcctggctaatttttgtatttttagtagagatggggtttcgccat  c.-126-1261

.         .         .         .         .         .           g.12541
gttggtcaggctgttctcaaactcctgacctcaggtgatccacctgccttggcttcccca  c.-126-1201

.         .         .         .         .         .           g.12601
gttatcttactaaactggaaagcatagcctttacttgtggcatgaacaaacttaatcagt  c.-126-1141

.         .         .         .         .         .           g.12661
aagaccactacttgctaaagatacggaaataaactgttagagagccattactgcagccat  c.-126-1081

.         .         .         .         .         .           g.12721
aagaattaattttttttttttttttttgagacggagtctcgctgtgttgcccaggctgga  c.-126-1021

.         .         .         .         .         .           g.12781
atgcagtggcaggatctcggctcactgcaagctccgcctcccgggttcatgccattctcc  c.-126-961

.         .         .         .         .         .           g.12841
tgcctcagtctcctgagtagctgggactacaggcacccgccaccacacccggctaatttt  c.-126-901

.         .         .         .         .         .           g.12901
tttctttgtatttttagtagagacggggtctcacgtgttagccaggatggtcttgatctg  c.-126-841

.         .         .         .         .         .           g.12961
ctgacctcgtgatctgtctgcctcggcctcccaaagtgctgggattacaggcgtaagcca  c.-126-781

.         .         .         .         .         .           g.13021
ctgcgcccagccaataattaattttttggtagtttgaatatgtgtgccattatttggttg  c.-126-721

.         .         .         .         .         .           g.13081
caatattgcagtggagtgttttgttttgtttttttttttgagacggagtctcgctctgtc  c.-126-661

.         .         .         .         .         .           g.13141
gcccaggctggagtgccgtggtgcgatctcggctcactgcatgctctgcctcccaggttt  c.-126-601

.         .         .         .         .         .           g.13201
gcaccattctcagcctcccaagtagctggtactacaggcgcctgccaccacacccggcta  c.-126-541

.         .         .         .         .         .           g.13261
attttttgtatttttagtacagacggggtttcaccatgttagccaggctggtctcgatct  c.-126-481

.         .         .         .         .         .           g.13321
cctgacctcgtgatctgcccgccttggcctcccaaagtgctgggattacaggcatgagcc  c.-126-421

.         .         .         .         .         .           g.13381
accgcgcctggcctttttttttttttttttttttgagacaagatctctcactctgtcaag  c.-126-361

.         .         .         .         .         .           g.13441
caggctggaatgcagtggcacaatctcagctcagtacagcctcaaactcctgggtgagtc  c.-126-301

.         .         .         .         .         .           g.13501
tcccaccctggcttccgaaagcgttaagattactggtgtgagcctggagtactattttgc  c.-126-241

.         .         .         .         .         .           g.13561
tacttagaaacctttagtcctttatatatttagcaaatgtgtgaaaaaataaatgaatgt  c.-126-181

.         .         .         .         .         .           g.13621
tttgttattggcttgatggtggacatttatggaatggctcggttagtgacatgacatgaa  c.-126-121

.         .         .         .         .         .           g.13681
caggtgttttgtttctttcccaattttttctgtcttcagttttccctcattttttttcat  c.-126-61

.         .         .         .         .         .           g.13741
actatatgcgtatttgtatgaatttagtgtttcataaaatgatttgtgcttttcttttag  c.-126-1


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